python-pyfaidx-examples 0.5.8-2 (s390x binary) in ubuntu hirsute
Samtools provides a function "faidx" (FAsta InDeX), which creates a
small flat index file ".fai" allowing for fast random access to any
subsequence in the indexed FASTA file, while loading a minimal amount of
the file in to memory. This Python module implements pure Python classes
for indexing, retrieval, and in-place modification of FASTA files using
a samtools compatible index. The pyfaidx module is API compatible with
the pygr seqdb module. A command-line script "faidx" is installed
alongside the pyfaidx module, and facilitates complex manipulation of
FASTA files without any programming knowledge.
.
This package provides example data to test the Python modules.
Details
- Package version:
- 0.5.8-2
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
amd64 build of python-pyfaidx 0.5.8-2 in ubuntu focal PROPOSED produced
these files:
- python-pyfaidx-examples_0.5.8-2_all.deb (44.1 KiB)
Package relationships
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