libssw0 1.1-9 (armhf binary) in ubuntu groovy
SSW is a fast implementation of the Smith-Waterman algorithm, which uses the
Single-Instruction Multiple-Data (SIMD) instructions to parallelize the
algorithm at the instruction level. SSW library provides an API that can be
flexibly used by programs written in C, C++ and other languages. The library
can do protein and genome alignment directly.
Current version of this implementation is ~50 times faster than an ordinary
Smith-Waterman. It can return the Smith-Waterman score, alignment location
and traceback path (cigar) of the optimal alignment accurately; and return
the sub-optimal alignment score and location heuristically.
Details
- Package version:
- 1.1-9
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
armhf build of libssw 1.1-9 in ubuntu focal PROPOSED produced
these files:
- libssw0_1.1-9_armhf.deb (20.4 KiB)
Package relationships
- Depends on: