r-bioc-dnacopy binary package in Ubuntu Focal ppc64el
Implements the circular binary segmentation (CBS) algorithm to segment DNA
copy number data and identify genomic regions with abnormal copy number.
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This package is for analyzing array DNA copy number data, which is usually
(but not always) called array Comparative Genomic Hybridization (array CGH)
data It implements a methodology for finding change-points in these data which
are points after which the (log) test over reference ratios have changed
location. This model is that the change-points correspond to positions where
the underlying DNA copy number has changed. Therefore, change-points can be
used to identify regions of gained and lost copy number. Also provided is a
function for making relevant plots of these data.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2020-01-30 15:33:21 UTC | Published | Ubuntu Focal ppc64el | release | universe | gnu-r | Optional | 1.60.0-1 | ||
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Deleted | Ubuntu Focal ppc64el | proposed | universe | gnu-r | Optional | 1.60.0-1 | |||
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2020-01-30 15:33:54 UTC | Superseded | Ubuntu Focal ppc64el | release | universe | gnu-r | Optional | 1.58.0-1 | ||
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