spaln binary package in Ubuntu Focal amd64
Spaln (space-efficient spliced alignment) is a stand-alone program that
maps and aligns a set of cDNA or protein sequences onto a whole genomic
sequence in a single job. It also performs spliced or ordinary alignment
after rapid similarity search against a protein sequence database,
if a genomic segment or an amino acid sequence is given as a query.
.
spaln supports a combination of protein sequence database and a
given genomic segment and performs rapid similarity searches and
(semi-)global alignments of a set of protein sequence queries against
a protein sequence database. Spaln adopts multi-phase heuristics that
makes it possible to perform the job on a conventional personal computer.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
---|---|---|---|---|---|---|---|---|---|
2020-03-23 01:53:20 UTC | Published | Ubuntu Focal amd64 | release | universe | science | Optional | 2.4.0+dfsg-2build1 | ||
|
|||||||||
Deleted | Ubuntu Focal amd64 | proposed | universe | science | Optional | 2.4.0+dfsg-2build1 | |||
|
|||||||||
2020-03-23 01:54:02 UTC | Superseded | Ubuntu Focal amd64 | release | universe | science | Optional | 2.4.0+dfsg-2 | ||
|
|||||||||
2020-01-13 08:23:40 UTC | Superseded | Ubuntu Focal amd64 | proposed | universe | science | Optional | 2.4.0+dfsg-1 | ||
|
|||||||||
2020-03-24 06:10:11 UTC | Deleted | Ubuntu Focal amd64 | proposed | universe | science | Optional | 2.4.0+dfsg-2 | ||
|
|||||||||
2020-01-13 09:43:22 UTC | Superseded | Ubuntu Focal amd64 | release | universe | science | Optional | 2.3.2b-1 | ||
|
|||||||||
2020-01-14 12:10:08 UTC | Deleted | Ubuntu Focal amd64 | proposed | universe | science | Optional | 2.3.2b-1 | ||
|