skewer binary package in Ubuntu Focal amd64
skewer implements the bit-masked k-difference matching algorithm
dedicated to the task of adapter trimming and it is specially designed
for processing next-generation sequencing (NGS) paired-end sequences.
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Features
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* Detection and removal of adapter sequences
* Insertion and deletion allowed in pattern matching
* Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
* Demultiplexing of barcoded sequencing runs
* Multi-threading support
* Trimming based on phred quality scores
* IUPAC characters for barcodes and adapters
* Compressed input and output support
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
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2020-03-23 01:53:20 UTC | Published | Ubuntu Focal amd64 | release | universe | science | Optional | 0.2.2-1build1 | ||
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Deleted | Ubuntu Focal amd64 | proposed | universe | science | Optional | 0.2.2-1build1 | |||
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2020-03-23 01:54:02 UTC | Superseded | Ubuntu Focal amd64 | release | universe | science | Optional | 0.2.2-1 | ||
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2020-03-24 06:10:11 UTC | Deleted | Ubuntu Focal amd64 | proposed | universe | science | Optional | 0.2.2-1 | ||
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