r-bioc-dada2 binary package in Ubuntu Focal amd64

 The dada2 package contributes to software workflows to interpret
 sequencing data from microbiota - the relative abundance of
 bacterial and/or yeast, typically measured in the gut.
 It infers exact amplicon sequence
 variants (ASVs) from high-throughput amplicon sequencing data,
 replacing the coarser and less accurate OTU clustering approach.
 The dada2 pipeline takes as input demultiplexed fastq files, and
 outputs the sequence variants and their sample-wise abundances
 after removing substitution and chimera errors. Taxonomic
 classification is available via a native implementation of the RDP
 naive Bayesian classifier, and species-level assignment to 16S
 rRNA gene fragments by exact matching.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2020-02-27 11:13:28 UTC Published Ubuntu Focal amd64 release universe gnu-r Optional 1.14.1+dfsg-1
  • Published
  • Copied from ubuntu focal-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Focal amd64 proposed universe gnu-r Optional 1.14.1+dfsg-1
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to Release

  • Published
  2020-02-27 11:15:54 UTC Superseded Ubuntu Focal amd64 release universe gnu-r Optional 1.14.0+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of r-bioc-dada2 1.14.1+dfsg-1 in ubuntu focal PROPOSED
  • Published
  • Copied from ubuntu focal-proposed amd64 in Primary Archive for Ubuntu
  2020-02-28 12:10:13 UTC Deleted Ubuntu Focal amd64 proposed universe gnu-r Optional 1.14.0+dfsg-1
  • Removed from disk .
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to Release

  • Published