Binary package “bali-phy” in ubuntu focal
Bayesian Inference of Alignment and Phylogeny
BAli-Phy estimates multiple sequence alignments and evolutionary trees
from unaligned DNA, amino acid, or codon sequences. BAli-Phy uses MCMC
to estimate evolutionary trees, positive selection, and branch lengths
while averaging over alternative alignments. BAli-Phy can display
alignment ambiguity graphically in an alignment uncertainty (AU) plot.
.
BAli-Phy can also estimate phylogenies from a fixed alignment (like MrBayes
and BEAST) using substitution models like GTR+gamma. BAli-Phy automatically
estimates relative rates for each gene.
Source package
Published versions
- bali-phy 3.4.1+dfsg-2build1 in amd64 (Proposed)
- bali-phy 3.4.1+dfsg-2build1 in amd64 (Release)
- bali-phy 3.4.1+dfsg-2build1 in arm64 (Proposed)
- bali-phy 3.4.1+dfsg-2build1 in arm64 (Release)
- bali-phy 3.4.1+dfsg-2build1 in armhf (Proposed)
- bali-phy 3.4.1+dfsg-2build1 in armhf (Release)
- bali-phy 3.4.1+dfsg-2build1 in ppc64el (Proposed)
- bali-phy 3.4.1+dfsg-2build1 in ppc64el (Release)
- bali-phy 3.4.1+dfsg-2build1 in s390x (Proposed)
- bali-phy 3.4.1+dfsg-2build1 in s390x (Release)