hmmer 2.3.2-1 (ia64 binary) in ubuntu feisty

 HMMER is an implementation of profile hidden Markov model methods for
 sensitive searches of biological sequence databases using multiple sequence
 alignments as queries.
 .
 Given a multiple sequence alignment as input, HMMER builds a statistical
 model called a "hidden Markov model" which can then be used as a query into
 a sequence database to find (and/or align) additional homologues of the
 sequence family.
 .
  Homepage: http://hmmer.wustl.edu/