clustalw 1.83-1.1 (i386 binary) in ubuntu feisty
This program performs an alignment of multiple nucleotide or amino
acid sequences. It recognizes the format of input sequences and whether
the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The
output format may be selected from in various formats for multiple alignments
such as Phylip or FASTA. ClustalW is very well accepted. An alternative,
particularly for fragmented sequences, may be
T-Coffee (http://
DIALIGN (http://
or one of the other many algorithms as summarised on
http://
.
The output of ClustalW can be edited manually but preferably with an alignment
editor like seaview or within its companion clustalx.
When building a model from your alignment, this can be applied for improved
database searches. The debian package hmmer creates such in form of an HMM.
.
URL: ftp://ftp-
URL: ftp://ftp.
Details
- Package version:
- 1.83-1.1
- Status:
- Superseded
- Component:
- multiverse
- Priority:
- Optional
Downloadable files
- clustalw_1.83-1.1_i386.deb (160.2 KiB)