textopo 1.3-2 (i386 binary) in ubuntu edgy
[Biology] LaTeX presentation of topology of transmembrane proteins
TeXtopo is a LaTeX2e macro package that provides two new environments:
.
* the 'textopo' environment is used for plotting topology data of
membrane proteins derived from PHD predictions, from SwissProt database
files or from manually entered data containing sequence and transmembrane
domain information, and
.
* the 'helical wheel' environment draws
transmembrane domains as seen from above or beneath the cell membrane.
.
Both kinds of plots can be richly decorated with special shading for
domains of interest, plus labels and legends. TeXtopo is fully compatible
with TeXshade (v1.3 and up) -- the comprehensive alignment shading
package for the TeX community. This allows one to apply calculated
shading based on sequence conservation and functional aspects of the
residue sidechains.
.
Homepage: http://
Details
- Package version:
- 1.3-2
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
- textopo_1.3-2_all.deb (deleted)