msxpertsuite 5.2.1-1 (amd64 binary) in ubuntu cosmic
msXpertSuite is a collection of programs to simulate and analyse mass
spectrometric data obtained on linear (bio-)polymers. It is the
successor of GNU polyXmass, first, and of massXpert, second.
.
Three programs, massXpert, mineXpert and convXpert allow the following:
.
massXpert:
- making brand new polymer chemistry definitions;
- using the definitions to perform easy calculations in a desktop
calculator-like manner;
- performing sophisticated polymer sequence editing and simulations;
- perform m/z list comparisons;
.
Chemical simulations encompass cleavage (either chemical or
enzymatic), gas-phase fragmentations, chemical modification of any
monomer in the polymer sequence, cross-linking of monomers in the
sequence, arbitrary mass searches, calculation of the isotopic
pattern...
.
mineXpert:
- Open mass spectrometry data files (mzML, mzXML, asc, xy, ...);
- Calculate and display the TIC chromatogram;
- For mobility data, calculate and display a mz=f(dt) color map;
- Integrate the data from the TIC chromatogram or color map
- to mass spectrum;
- to drift spectrum;
- back to TIC chromatogram (XIC chromatogram);
- reverse operations;
- Export the data to text files;
- Slice a big initial file into smaller chunks for easier mining;
- Define how mining activity is recorded on disk for later use;
- Convert mzML files into a private (albeit open) mass spectrometry
format that allows better performance (based on SQLite3).
.
This package contains the binary programs.
Details
- Package version:
- 5.2.1-1
- Status:
- Superseded
- Component:
- universe
- Priority:
- Optional
Downloadable files
- msxpertsuite_5.2.1-1_amd64.deb (1.8 MiB)
Package relationships
- Depends on:
- libc6 (>= 2.14)
- libgcc1 (>= 1:3.0)
- libgomp1 (>= 4.9)
- libpwiz3 (>= 3.0.0)
- libqcustomplot1.3
- libqt5core5a (>= 5.9.0~beta)
- libqt5gui5 (>= 5.8.0)
- libqt5script5 (>= 5.6.0~beta)
- libqt5sql5 (>= 5.7.0)
- libqt5svg5 (>= 5.6.0~beta)
- libqt5widgets5 (>= 5.7.0)
- libqt5xml5 (>= 5.7.0)
- libstdc++6 (>= 5.2)
- msxpertsuite-data (>= 5.2.1)
- msxpertsuite-data (<< 5.2.1A~)
- Conflicts:
- Replaces:
- Suggests:
- Breaks: