libjellyfish-2.0-2 binary package in Ubuntu Bionic arm64
JELLYFISH is a tool for fast, memory-efficient counting of k-mers in
DNA. A k-mer is a substring of length k, and counting the occurrences
of all such substrings is a central step in many analyses of DNA
sequence. JELLYFISH can count k-mers using an order of magnitude less
memory and an order of magnitude faster than other k-mer counting
packages by using an efficient encoding of a hash table and by
exploiting the "compare-and-swap" CPU instruction to increase
parallelism.
.
JELLYFISH is a command-line program that reads FASTA and multi-FASTA
files containing DNA sequences. It outputs its k-mer counts in an
binary format, which can be translated into a human-readable text
format using the "jellyfish dump" command.
.
This package contains the dynamic library the main executable of
jellyfish is linked to.
Publishing history
Date | Status | Target | Component | Section | Priority | Phased updates | Version | ||
---|---|---|---|---|---|---|---|---|---|
2018-04-10 21:44:16 UTC | Published | Ubuntu Bionic arm64 | release | universe | libs | Optional | 2.2.8-3build1 | ||
|
|||||||||
Deleted | Ubuntu Bionic arm64 | proposed | universe | libs | Optional | 2.2.8-3build1 | |||
|
|||||||||
2018-04-10 19:29:19 UTC | Superseded | Ubuntu Bionic arm64 | proposed | universe | libs | Optional | 2.2.8-3 | ||
|
|||||||||
2018-04-12 00:10:10 UTC | Deleted | Ubuntu Bionic arm64 | proposed | universe | libs | Optional | 2.2.8-3 | ||
|
|||||||||
2018-04-10 00:10:08 UTC | Deleted | Ubuntu Bionic arm64 | release | universe | libs | Optional | 2.2.6-6 | ||
|
|||||||||
2018-04-10 00:10:08 UTC | Deleted | Ubuntu Bionic arm64 | proposed | universe | libs | Optional | 2.2.6-6 | ||
|