profphd binary package in Ubuntu Bionic amd64

 This package provides prof(1), the protein secondary structure, accessibility
 and transmembrane helix predictor from Burkhard Rost. Prediction is either
 done from protein sequence alone or from an alignment - the latter should be
 used for optimal performance.
 .
 How well does prof(1) perform?
 .
  * Secondary structure is predicted at an expected average accuracy > 72% for
    the three states helix, strand and loop.
 .
  * Solvent accessibility is predicted at a correlation coefficient
    (correlation between experimentally observed and predicted relative
    solvent accessibility) of 0.54
 .
  * Transmembrane helix prediction has an expected per-residue accuracy of
    about 95%. The number of false positives, i.e., transmembrane helices
    predicted in globular proteins, is about 2%.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2017-11-23 01:59:13 UTC Published Ubuntu Bionic amd64 release universe science Extra 1.0.42-2
  • Published
  • Copied from ubuntu bionic-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Bionic amd64 proposed universe science Extra 1.0.42-2
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published
  2017-11-23 02:02:02 UTC Superseded Ubuntu Bionic amd64 release universe science Extra 1.0.42-1
  • Removal requested .
  • Superseded by amd64 build of profphd 1.0.42-2 in ubuntu bionic PROPOSED
  • Published
  • Copied from ubuntu wily-proposed amd64 in Primary Archive for Ubuntu

Source package