metaphlan2-data binary package in Ubuntu Bionic amd64

 MetaPhlAn is a computational tool for profiling the composition of
 microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from
 metagenomic shotgun sequencing data with species level resolution. From
 version 2.0, MetaPhlAn is also able to identify specific strains (in the
 not-so-frequent cases in which the sample contains a previously
 sequenced strains) and to track strains across samples for all species.
 .
 MetaPhlAn 2.0 relies on ~1M unique clade-specific marker genes (the
 marker information file can be found at src/utils/markers_info.txt.bz2
 or here) identified from ~17,000 reference genomes (~13,500 bacterial
 and archaeal, ~3,500 viral, and ~110 eukaryotic), allowing:
 .
  * unambiguous taxonomic assignments;
  * accurate estimation of organismal relative abundance;
  * species-level resolution for bacteria, archaea, eukaryotes and
    viruses;
  * strain identification and tracking
  * orders of magnitude speedups compared to existing methods.
  * metagenomic strain-level population genomics
 .
 This package contains the data for metaphlan2.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2017-12-06 01:13:24 UTC Published Ubuntu Bionic amd64 release universe science Optional 2.6.0+ds-3
  • Published
  • Copied from ubuntu bionic-proposed amd64 in Primary Archive for Ubuntu
  Deleted Ubuntu Bionic amd64 proposed universe science Optional 2.6.0+ds-3
  • Removal requested .
  • Deleted by Ubuntu Archive Robot

    moved to release

  • Published
  2017-12-06 01:14:29 UTC Superseded Ubuntu Bionic amd64 release universe science Optional 2.6.0+ds-2
  • Removed from disk .
  • Removal requested .
  • Superseded by amd64 build of metaphlan2-data 2.6.0+ds-3 in ubuntu bionic PROPOSED
  • Published
  • Copied from ubuntu zesty-proposed amd64 in Primary Archive for Ubuntu