Binary package “picard-tools” in ubuntu bionic
Command line tools to manipulate SAM and BAM files
SAM (Sequence Alignment/Map) format is a generic format for storing
large nucleotide sequence alignments. Picard Tools includes these
utilities to manipulate SAM and BAM files:
AddCommentsToBam FifoBuffer
AddOrReplaceR
BaitDesigner FilterVcf
BamIndexStats FixMateInformation
BamToBfq GatherBamFiles
BedToIntervalList GatherVcfs
BuildBamIndex GenotypeConcordance
CalculateHsMe
CalculateRead
CheckIllumina
CheckTerminat
CleanSam MakeSitesOnlyVcf
CollectAlignm
CollectBaseDi
CollectGcBias
CollectHiSeqX
CollectIllumi
CollectIllumi
CollectInsert
CollectJumpin
CollectMultip
CollectOxoGMe
CollectQualit
CollectRawWgs
CollectRnaSeq
CollectRrbsMe
CollectSequen
CollectTarget
CollectVarian
CollectWgsMetrics ScatterInterval
CompareMetrics SortSam
CompareSAMs SortVcf
ConvertSequen
CreateSequenc
DownsampleSam UpdateVcfSequen
EstimateLibra
ExtractIllumi
ExtractSequences VcfToIntervalList
FastqToSam ViewSam
Source package
Published versions
- picard-tools 2.8.1+dfsg-3 in amd64 (Proposed)
- picard-tools 2.8.1+dfsg-3 in amd64 (Release)
- picard-tools 2.8.1+dfsg-3 in arm64 (Proposed)
- picard-tools 2.8.1+dfsg-3 in arm64 (Release)
- picard-tools 2.8.1+dfsg-3 in armhf (Proposed)
- picard-tools 2.8.1+dfsg-3 in armhf (Release)
- picard-tools 2.8.1+dfsg-3 in i386 (Proposed)
- picard-tools 2.8.1+dfsg-3 in i386 (Release)
- picard-tools 2.8.1+dfsg-3 in ppc64el (Proposed)
- picard-tools 2.8.1+dfsg-3 in ppc64el (Release)
- picard-tools 2.8.1+dfsg-3 in s390x (Proposed)
- picard-tools 2.8.1+dfsg-3 in s390x (Release)
