Ubuntu
toppred package

toppred 1.10-10 source package in Ubuntu

Changelog

toppred (1.10-10) unstable; urgency=medium

  * Fix watch file
  * Standards-Version: 4.6.1 (routine-update)
  * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository-Browse.

 -- Andreas Tille <email address hidden>  Sat, 26 Nov 2022 20:46:50 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
toppred_1.10-10.dsc 2.0 KiB 4c46e55ecfee821159d45c0ff0fac9b55b8f46ab104265f311bb3285ec63c701
toppred_1.10.orig.tar.gz 155.0 KiB 3593666a4ae65b752e8d7945dc9ce1b8d21d888190f9917c31c48335157394b3
toppred_1.10-10.debian.tar.xz 3.4 KiB 45dfe127a9e0d5fdb81e2fc7c9d50612a3ef45ddd2d2d7b236cc052890fbacd8

Available diffs

No changes file available.

Binary packages built by this source

toppred: transmembrane topology prediction

 Toppred is a program to determine the topology of a transmembrane
 protein based on G. von Heijne algorithm.
 .
 Each sequence from seq data in fasta format is processed, and toppred
 generate the Hydrophobycity profile of the sequence, and the
 corresponding hydrophobycities values in the file sequence-ID.hydro.
 .
 Furthermore, the predicted topologies are represented as png images.
 Each topology is stored in file sequence-ID-number.png
 .
 The hydrophobicity profile is computed using a window formed by a core
 rectangular window of size n, flanked by 2 triangular windows of size q.
 NB rectangular and triangular mean that the ponderation values inside
 those windows are respectively constant and variable.
 .
 This program is a new implementation of the original toppred program,
 based on G. von Heijne algorithm

toppred-dbgsym: debug symbols for toppred