t-coffee 11.00.8cbe486-2 source package in Ubuntu

Changelog

t-coffee (11.00.8cbe486-2) unstable; urgency=medium

  * cme fix dpkg-control
  * update debian/copyright
  * fix clean target
  * compress changelog with '-n' option
  * propagate hardening options
  * Do not build unused TMalign
  * When creating subdirectories in $HOME do not make these world
    writable but keep users umask
    Closes: #751579
  * Drop redundant debian/README.source
  * Package builds for all architectures so this
    Closes: #631249
    (feel free to reopen if tests might keep on failing on armel)

 -- Andreas Tille <email address hidden>  Tue, 22 Dec 2015 19:02:14 +0100

Upload details

Uploaded by:
Debian Med on 2015-12-23
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Xenial release on 2015-12-24 universe science

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t-coffee_11.00.8cbe486-2.dsc 2.1 KiB 5935f152c4d8776d2a25e401381abb91c235408f3cd6ae964b0b85948d3ee35d
t-coffee_11.00.8cbe486.orig.tar.gz 3.4 MiB b8018433574ff7705c49cd974bebb06a48eb8bc5e38aaa9eb4f53f2e7778e72c
t-coffee_11.00.8cbe486-2.debian.tar.xz 13.0 KiB 6b2ebf22d1e0728273ed2c35188ee249d36446d81cd5b9edcd7229d96da4b8b9

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Binary packages built by this source

t-coffee: Multiple Sequence Alignment

 T-Coffee is a multiple sequence alignment package. Given a set of
 sequences (Proteins or DNA), T-Coffee generates a multiple sequence
 alignment. Version 2.00 and higher can mix sequences and structures.
 .
 T-Coffee allows the combination of a collection of multiple/pairwise,
 global or local alignments into a single model. It can also
 estimate the level of consistency of each position within the new
 alignment with the rest of the alignments. See the pre-print for more
 information
 .
 T-Coffee has a special called M-Coffee that makes it possible to combine the
 output of many multiple sequence alignment packages. In its published version,
 it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and
 T-Coffee. A special version has been made for Debian, DM-Coffee, that uses
 only free software by replacing Clustal W by Kalign. Using the 8 Methods of
 M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite
 methods if you prefer.

t-coffee-dbgsym: debug symbols for package t-coffee

 T-Coffee is a multiple sequence alignment package. Given a set of
 sequences (Proteins or DNA), T-Coffee generates a multiple sequence
 alignment. Version 2.00 and higher can mix sequences and structures.
 .
 T-Coffee allows the combination of a collection of multiple/pairwise,
 global or local alignments into a single model. It can also
 estimate the level of consistency of each position within the new
 alignment with the rest of the alignments. See the pre-print for more
 information
 .
 T-Coffee has a special called M-Coffee that makes it possible to combine the
 output of many multiple sequence alignment packages. In its published version,
 it uses MUSCLE, PROBCONS, POA, DiAlign-TS, MAFFT, Clustal W, PCMA and
 T-Coffee. A special version has been made for Debian, DM-Coffee, that uses
 only free software by replacing Clustal W by Kalign. Using the 8 Methods of
 M-Coffee can sometimes be a bit heavy. You can use a subset of your favorite
 methods if you prefer.

t-coffee-examples: annotated examples for the use of T-Coffee

 To help increasing the proficiency in the use of T-Coffee, this
 package provides examples for input sequences and their proper
 alignment.