subread 2.0.6+dfsg-2 source package in Ubuntu
Changelog
subread (2.0.6+dfsg-2) unstable; urgency=medium * Team upload. * d/control: build on riscv64 as well. * d/patches/0001-src-Makefile.Linux-Do-not-set-CFLAGS-and-CXXFLAGS- to.patch: fix embedded build path in various binaries. Thanks to Vagrant Cascadian <email address hidden>. Closes: #1033089. -- Michael R. Crusoe <email address hidden> Wed, 13 Sep 2023 14:21:47 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- amd64 arm64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 ppc64el riscv64 loong64 all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Noble | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
subread_2.0.6+dfsg-2.dsc | 2.2 KiB | 65d6a5bff0ba7b2262eb81e947ac6160811801f0bc594fea06bad920926ec65f |
subread_2.0.6+dfsg.orig.tar.xz | 15.8 MiB | 55026879f4cb40f0eca223a017fb6790fbbeeec7c828f27cb61302defbdf9753 |
subread_2.0.6+dfsg-2.debian.tar.xz | 18.4 KiB | e03dab91cefb9179cfcfe2714ff6125f0a3f30c435a8e2c585ce2811552983a6 |
Available diffs
- diff from 2.0.4+dfsg-1 to 2.0.6+dfsg-2 (44.2 KiB)
No changes file available.
Binary packages built by this source
- subread: toolkit for processing next-gen sequencing data
Subread aligner can be used to align both gDNA-seq and RNA-seq reads.
Subjunc aligner was specified designed for the detection of exon-exon
junction. For the mapping of RNA-seq reads, Subread performs local
alignments and Subjunc performs global alignments.
- subread-data: data files for subread package
This package provides data files from the original tarball:
- annotation: Directory including NCBI RefSeq gene annotations for
genomes 'hg19', 'mm10' and 'mm9'. Each row is an exon.
Entrez gene identifiers and chromosomal coordinates are provided for
each exon.
- test: Directory including test data and scripts.
- subread-dbgsym: debug symbols for subread