Ubuntu
subread package

subread 2.0.6+dfsg-2 source package in Ubuntu

Changelog

subread (2.0.6+dfsg-2) unstable; urgency=medium

  * Team upload.
  * d/control: build on riscv64 as well.
  * d/patches/0001-src-Makefile.Linux-Do-not-set-CFLAGS-and-CXXFLAGS-
    to.patch: fix embedded build path in various binaries.
    Thanks to Vagrant Cascadian <email address hidden>.
    Closes: #1033089.

 -- Michael R. Crusoe <email address hidden>  Wed, 13 Sep 2023 14:21:47 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 ppc64el riscv64 loong64 all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Noble release universe misc

Downloads

File Size SHA-256 Checksum
subread_2.0.6+dfsg-2.dsc 2.2 KiB 65d6a5bff0ba7b2262eb81e947ac6160811801f0bc594fea06bad920926ec65f
subread_2.0.6+dfsg.orig.tar.xz 15.8 MiB 55026879f4cb40f0eca223a017fb6790fbbeeec7c828f27cb61302defbdf9753
subread_2.0.6+dfsg-2.debian.tar.xz 18.4 KiB e03dab91cefb9179cfcfe2714ff6125f0a3f30c435a8e2c585ce2811552983a6

Available diffs

No changes file available.

Binary packages built by this source

subread: toolkit for processing next-gen sequencing data

 Subread aligner can be used to align both gDNA-seq and RNA-seq reads.
 Subjunc aligner was specified designed for the detection of exon-exon
 junction. For the mapping of RNA-seq reads, Subread performs local
 alignments and Subjunc performs global alignments.

subread-data: data files for subread package

 This package provides data files from the original tarball:
  - annotation: Directory including NCBI RefSeq gene annotations for
 genomes 'hg19', 'mm10' and 'mm9'. Each row is an exon.
 Entrez gene identifiers and chromosomal coordinates are provided for
 each exon.
  - test: Directory including test data and scripts.

subread-dbgsym: debug symbols for subread