Ubuntu
subread package

subread 2.0.4+dfsg-1 source package in Ubuntu

Changelog

subread (2.0.4+dfsg-1) unstable; urgency=medium

  [ Nilesh Patra ]
  * [skip ci] Remove myself from uploaders

  [ Alexandre Mestiashvili ]
  * d/copyright, remove .o files and prebuilt binary from src/longread-one
  * New upstream version 2.0.4+dfsg
  * d/patches, update and refresh,
    incorporare cross.patch into arch_specific_flags.patch
  * d/*.1, generate manpages
  * remove unused d/filter.pl
  * d/control:
    - debhelper-compat 13
    - Policy version 4.6.2

 -- Alexandre Mestiashvili <email address hidden>  Sat, 11 Mar 2023 12:49:17 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 ppc64el all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release universe misc

Downloads

File Size SHA-256 Checksum
subread_2.0.4+dfsg-1.dsc 2.2 KiB 3dd6d5287e0e66b9ddb4a71cbb51f7dc9b978fd914eb865d66ad52ff4b0f93a9
subread_2.0.4+dfsg.orig.tar.xz 15.6 MiB 67f37032ac3e3bab0af0ed6505c4cf267ce0af7cfdc2e88ffe9299ff83e544b0
subread_2.0.4+dfsg-1.debian.tar.xz 17.8 KiB 8a4269f418a32dd51125c4677b13bc4a96aa3aba8895642c0665415997b39a1a

Available diffs

No changes file available.

Binary packages built by this source

subread: toolkit for processing next-gen sequencing data

 Subread aligner can be used to align both gDNA-seq and RNA-seq reads.
 Subjunc aligner was specified designed for the detection of exon-exon
 junction. For the mapping of RNA-seq reads, Subread performs local
 alignments and Subjunc performs global alignments.

subread-data: data files for subread package

 This package provides data files from the original tarball:
  - annotation: Directory including NCBI RefSeq gene annotations for
 genomes 'hg19', 'mm10' and 'mm9'. Each row is an exon.
 Entrez gene identifiers and chromosomal coordinates are provided for
 each exon.
  - test: Directory including test data and scripts.

subread-dbgsym: debug symbols for subread