subread 2.0.4+dfsg-1 source package in Ubuntu
Changelog
subread (2.0.4+dfsg-1) unstable; urgency=medium [ Nilesh Patra ] * [skip ci] Remove myself from uploaders [ Alexandre Mestiashvili ] * d/copyright, remove .o files and prebuilt binary from src/longread-one * New upstream version 2.0.4+dfsg * d/patches, update and refresh, incorporare cross.patch into arch_specific_flags.patch * d/*.1, generate manpages * remove unused d/filter.pl * d/control: - debhelper-compat 13 - Policy version 4.6.2 -- Alexandre Mestiashvili <email address hidden> Sat, 11 Mar 2023 12:49:17 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- amd64 arm64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 ppc64el all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Mantic | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
subread_2.0.4+dfsg-1.dsc | 2.2 KiB | 3dd6d5287e0e66b9ddb4a71cbb51f7dc9b978fd914eb865d66ad52ff4b0f93a9 |
subread_2.0.4+dfsg.orig.tar.xz | 15.6 MiB | 67f37032ac3e3bab0af0ed6505c4cf267ce0af7cfdc2e88ffe9299ff83e544b0 |
subread_2.0.4+dfsg-1.debian.tar.xz | 17.8 KiB | 8a4269f418a32dd51125c4677b13bc4a96aa3aba8895642c0665415997b39a1a |
Available diffs
- diff from 2.0.3+dfsg-1 to 2.0.4+dfsg-1 (51.9 KiB)
No changes file available.
Binary packages built by this source
- subread: toolkit for processing next-gen sequencing data
Subread aligner can be used to align both gDNA-seq and RNA-seq reads.
Subjunc aligner was specified designed for the detection of exon-exon
junction. For the mapping of RNA-seq reads, Subread performs local
alignments and Subjunc performs global alignments.
- subread-data: data files for subread package
This package provides data files from the original tarball:
- annotation: Directory including NCBI RefSeq gene annotations for
genomes 'hg19', 'mm10' and 'mm9'. Each row is an exon.
Entrez gene identifiers and chromosomal coordinates are provided for
each exon.
- test: Directory including test data and scripts.
- subread-dbgsym: debug symbols for subread