Ubuntu
stacks package

stacks 2.65+dfsg-2 source package in Ubuntu

Changelog

stacks (2.65+dfsg-2) unstable; urgency=medium

  * Team upload.
  * d/bin/stacks: Fix path to be libexec for executables
  * d/control: Add python3 and bsdextrautils to Depends
               Remove python3 from Recommends
               Add gdb to Suggests
  * d/tests: Add superficial autopkgtest (needs test data)
  * d/patches/change_program_exit_to_success.patch: Fix exit codes to be
    successful and output to stdout
  * d/patches/offer_help_option_for_stacks_gdb.patch: Gives usage information
    for options -h, --help, and --version

 -- Lance Lin <email address hidden>  Fri, 01 Sep 2023 20:40:42 +0700

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
stacks_2.65+dfsg-2.dsc 2.0 KiB a741cef6fd57905f269a47095624d9223ec2a14dba7f9bda916286fa10a51b6d
stacks_2.65+dfsg.orig.tar.xz 327.3 KiB 7b3feb2901a64c8681f66f3c9404192d2004981e2e6458fa4f61bc18f904aeea
stacks_2.65+dfsg-2.debian.tar.xz 11.8 KiB e80b1f503453a0ef9edec91ca63c52e7f1383624a7d522f1362778803f4209ac

Available diffs

No changes file available.

Binary packages built by this source

stacks: pipeline for building loci from short-read DNA sequences

 Stacks is a software pipeline for building loci from short-read sequences,
 such as those generated on the Illumina platform. Stacks was developed to work
 with restriction enzyme-based data, such as RAD-seq, for the purpose of
 building genetic maps and conducting population genomics and phylogeography.
 .
 Note that this package installs Stacks such that all commands must be run as:
 $ stacks <cmdname> <args>

stacks-dbgsym: debug symbols for stacks