ssake 3.8-2 source package in Ubuntu
Changelog
ssake (3.8-2) unstable; urgency=low
[ A. Costa ]
* Corrected a typo in debian/ssake.1 (Closes: #650469).
[ Charles Plessy ]
* Depend on libperl4-corelibs-perl | perl (<< 5.12.3-7).
Closes: #659428.
-- Charles Plessy <email address hidden> Sat, 11 Feb 2012 22:13:43 +0900
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- science
- Urgency:
- Low Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Precise | release | universe | science |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| ssake_3.8-2.dsc | 2.0 KiB | 44e4e9252680386cb3cb022c9f6521288bbc7cf08becd22f6dc59bc32fa3c02a |
| ssake_3.8.orig.tar.gz | 2.2 MiB | 9bc2ef83f17434ac13b71bb9d2fb4a4c73964382ca972427c0479b52ff38cd2e |
| ssake_3.8-2.debian.tar.gz | 5.5 KiB | 5699c509022104a96ee2a53d0c882187cb12ac2a67cfb699a3a21e4b76eedbfe |
Available diffs
- diff from 3.8-1 (in Ubuntu) to 3.8-2 (1.7 KiB)
No changes file available.
Binary packages built by this source
- ssake: genomics application for assembling millions of very short DNA sequences
The Short Sequence Assembly by K-mer search and 3′ read Extension
(SSAKE) is a genomics application for aggressively assembling
millions of short nucleotide sequences by progressively searching for
perfect 3′-most k-mers using a DNA prefix tree. SSAKE is designed to
help leverage the information from short sequences reads by
stringently clustering them into contigs that can be used to
characterize novel sequencing targets.
- ssake-examples: example data for SSAKE, a genomic assembler of short reads
This package contains test sequences for SSAKE, a genomics application for
assembling millions of very short DNA sequences.
.
Instructions about how to use the test data can be found in
/usr/share/doc/ssake/ SSAKE.readme. gz after the package `ssake' is installed.
