skewer 0.2.2-2 source package in Ubuntu
Changelog
skewer (0.2.2-2) unstable; urgency=medium * Team upload. * Standards-Version: 4.5.0 (routine-update) * Rules-Requires-Root: no (routine-update) -- Andreas Tille <email address hidden> Sat, 18 Apr 2020 08:31:23 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
---|---|---|
skewer_0.2.2-2.dsc | 1.9 KiB | 6cf4806a392f42964cec9f585795ce3d357cd81e780856c98141b49d5027d79e |
skewer_0.2.2.orig.tar.gz | 35.5 KiB | bc37afccdf55de047502b87fe56d537cdf78674ccaec1a401b2d29552d6b2dfc |
skewer_0.2.2-2.debian.tar.xz | 2.9 KiB | 7810eefc99dc99c266cc600065bdd55f2b3f7ecc8bbccea7bf0e13bd9ff724c6 |
Available diffs
- diff from 0.2.2-1build1 (in Ubuntu) to 0.2.2-2 (624 bytes)
No changes file available.
Binary packages built by this source
- skewer: post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm
dedicated to the task of adapter trimming and it is specially designed
for processing next-generation sequencing (NGS) paired-end sequences.
.
Features
.
* Detection and removal of adapter sequences
* Insertion and deletion allowed in pattern matching
* Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
* Demultiplexing of barcoded sequencing runs
* Multi-threading support
* Trimming based on phred quality scores
* IUPAC characters for barcodes and adapters
* Compressed input and output support
- skewer-dbgsym: debug symbols for skewer