skewer 0.2.2-1 source package in Ubuntu
Changelog
skewer (0.2.2-1) unstable; urgency=medium * Initial release (Closes: #944385) -- Steffen Moeller <email address hidden> Fri, 08 Nov 2019 23:23:55 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
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skewer_0.2.2-1.dsc | 1.9 KiB | aa156ce61be1ddc1af4e242c7b8d7c1d76acfa884abdcdccfcf85895dc9d6061 |
skewer_0.2.2.orig.tar.gz | 35.5 KiB | bc37afccdf55de047502b87fe56d537cdf78674ccaec1a401b2d29552d6b2dfc |
skewer_0.2.2-1.debian.tar.xz | 2.8 KiB | bb0c3f5a59818eb0ea1040e3359e4790e4d95103dff15df88f85f4837c037d67 |
No changes file available.
Binary packages built by this source
- skewer: post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm
dedicated to the task of adapter trimming and it is specially designed
for processing next-generation sequencing (NGS) paired-end sequences.
.
Features
.
* Detection and removal of adapter sequences
* Insertion and deletion allowed in pattern matching
* Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
* Demultiplexing of barcoded sequencing runs
* Multi-threading support
* Trimming based on phred quality scores
* IUPAC characters for barcodes and adapters
* Compressed input and output support
- skewer-dbgsym: debug symbols for skewer