seqmagick 0.8.6-1 source package in Ubuntu
Changelog
seqmagick (0.8.6-1) unstable; urgency=medium * New upstream version * Standards-Version: 4.6.2 (routine-update) -- Étienne Mollier <email address hidden> Sun, 11 Jun 2023 11:11:40 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Noble | release | universe | misc | |
Mantic | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
seqmagick_0.8.6-1.dsc | 2.2 KiB | c4c9695f8dbcc3e3f42f7c1c3076e10d0718cc45ec04ce7e7528115698836ac8 |
seqmagick_0.8.6.orig.tar.gz | 649.0 KiB | 83a83bbbf76eae756e96470075b729f2ae78a017a9432330133c6f94d9d49cba |
seqmagick_0.8.6-1.debian.tar.xz | 5.1 KiB | 4712e0820f742e606d9a343a7f40ca941bcf5834228b6c30feeba14debea2276 |
Available diffs
- diff from 0.8.4-3 to 0.8.6-1 (4.7 KiB)
No changes file available.
Binary packages built by this source
- seqmagick: imagemagick-like frontend to Biopython SeqIO
Seqmagick is a little utility to expose the file format conversion
in BioPython in a convenient way.
.
Features include:
.
* Modifying sequences:
- Remove gaps
- Reverse & reverse complement
- Trim to a range of residues
- Change case
- Sort by length or ID
* Displaying information about sequence files
* Subsetting sequence files by:
- Position
- ID
- Deduplication
* Filtering sequences by quality score
* Trimming alignments to a region of interest defined by the forward
and reverse primers