Ubuntu
seaview package

seaview 1:5.0.5-2 source package in Ubuntu

Changelog

seaview (1:5.0.5-2) unstable; urgency=medium

  [ Charles Plessy ]
  * Patch for command-line arguments of MUSCLE 5.

  [ Andreas Tille ]
  * Standards-Version: 4.6.2 (routine-update)

 -- Charles Plessy <email address hidden>  Sun, 18 Dec 2022 08:24:57 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release multiverse science
Lunar release multiverse science

Downloads

File Size SHA-256 Checksum
seaview_5.0.5-2.dsc 2.1 KiB 9c260414aa19588d2ed79ecad84d627911ee549e30ae97f99ea99ae5f78a9ebb
seaview_5.0.5.orig.tar.gz 460.7 KiB ce8f5e98ba47883bfa91e91bc79e4d3a26f158dd9983b5e78331a452a4b1f8f2
seaview_5.0.5-2.debian.tar.xz 16.7 KiB ac244383a3b3084b543f7c4f18e3816639262d8b9cdc97c90cdf494f26abd601

Available diffs

No changes file available.

Binary packages built by this source

seaview: Multiplatform interface for sequence alignment and phylogeny

 SeaView is a viewer and editor of multiple sequence alignments, i.e.
 DNA or protein sequences are positioned each in their own separate line,
 such that the nucleotide/amino acid at a particular position (column) is
 presumed to have the same biochemical property.
 .
 SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA,
 PHYLIP, MASE, Newick) of DNA and protein sequences and of phylogenetic trees.
 Alignments can be manually edited. It drives the programs Muscle or Clustal
 Omega for multiple sequence alignment, and also allows one to use any external
 alignment algorithm able to read and write FASTA-formatted files. It computes
 phylogenetic trees by parsimony using PHYLIP's dnapars/protpars algorithm, by
 distance with NJ or BioNJ algorithms on a variety of evolutionary distances, or
 by maximum likelihood using the program PhyML 3.0.
 .
 SeaView draws phylogenetic
 trees on screen or PostScript files, and allows one to download sequences from
 EMBL/GenBank/UniProt using the Internet.

seaview-dbgsym: debug symbols for seaview