https://launchpad.net/ubuntu/+source/samtools/1.17-1/+build/26332610 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux riscv64-qemu-lgw01-009 5.13.0-1019-generic #21~20.04.1-Ubuntu SMP Thu Mar 24 22:36:01 UTC 2022 riscv64 Buildd toolchain package versions: launchpad-buildd_233~634~ubuntu20.04.1 python3-lpbuildd_233~634~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git_1:2.25.1-1ubuntu3.2 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1. Syncing the system clock with the buildd NTP service... 23 Jun 07:05:34 ntpdate[3296741]: adjust time server 10.211.37.1 offset -0.000256 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=mantic --arch=riscv64 PACKAGEBUILD-26332610 --image-type chroot /home/buildd/filecache-default/859743d4aa431be74cb50b11ddbd51d0d1ab094f Creating target for build PACKAGEBUILD-26332610 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=mantic --arch=riscv64 PACKAGEBUILD-26332610 Starting target for build PACKAGEBUILD-26332610 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=mantic --arch=riscv64 PACKAGEBUILD-26332610 'deb http://ftpmaster.internal/ubuntu mantic main universe' 'deb http://ftpmaster.internal/ubuntu mantic-security main universe' 'deb http://ftpmaster.internal/ubuntu mantic-updates main universe' 'deb http://ftpmaster.internal/ubuntu mantic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-26332610 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=mantic --arch=riscv64 PACKAGEBUILD-26332610 Updating target for build PACKAGEBUILD-26332610 Get:1 http://ftpmaster.internal/ubuntu mantic InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu mantic-security InRelease [90.7 kB] Get:3 http://ftpmaster.internal/ubuntu mantic-updates InRelease [90.7 kB] Get:4 http://ftpmaster.internal/ubuntu mantic-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu mantic/main riscv64 Packages [1320 kB] Get:6 http://ftpmaster.internal/ubuntu mantic/main Translation-en [515 kB] Get:7 http://ftpmaster.internal/ubuntu mantic/universe riscv64 Packages [13.9 MB] Get:8 http://ftpmaster.internal/ubuntu mantic/universe Translation-en [5936 kB] Get:9 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 Packages [51.2 kB] Get:10 http://ftpmaster.internal/ubuntu mantic-proposed/main Translation-en [25.3 kB] Get:11 http://ftpmaster.internal/ubuntu mantic-proposed/universe riscv64 Packages [453 kB] Get:12 http://ftpmaster.internal/ubuntu mantic-proposed/universe Translation-en [163 kB] Fetched 22.9 MB in 35s (649 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: gcc-13-base libproc2-0 The following packages will be upgraded: adduser advancecomp apt base-files bash binutils binutils-common binutils-riscv64-linux-gnu bsdutils ca-certificates coreutils cpp cpp-12 dash debconf diffutils dpkg dpkg-dev e2fsprogs fakeroot findutils g++ g++-12 gcc gcc-12 gcc-12-base gpg gpg-agent gpgconf gpgv grep hostname libacl1 libapparmor1 libapt-pkg6.0 libargon2-1 libasan8 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcrypt-dev libcrypt1 libcryptsetup12 libctf-nobfd0 libctf0 libdb5.3 libdebconfclient0 libdevmapper1.02.1 libdpkg-perl libext2fs2 libfakeroot libfdisk1 libgcc-12-dev libgcc-s1 libgcrypt20 libgnutls30 libgomp1 libgssapi-krb5-2 libisl23 libk5crypto3 libkmod2 libkrb5-3 libkrb5support0 liblzma5 libmd0 libmount1 libmpfr6 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libperl5.36 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage2 libsepol2 libsmartcols1 libsqlite3-0 libss2 libssl3 libstdc++-12-dev libstdc++6 libsystemd-shared libsystemd0 libtinfo6 libudev1 libuuid1 libzstd1 linux-libc-dev logsave lsb-base lto-disabled-list mawk mount ncurses-base ncurses-bin openssl perl perl-base perl-modules-5.36 pkgbinarymangler procps readline-common sed sensible-utils systemd systemd-sysv sysvinit-utils tar tzdata usrmerge util-linux util-linux-extra xz-utils zlib1g 132 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 93.3 MB of archives. After this operation, 2836 kB disk space will be freed. Get:1 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcrypt-dev riscv64 1:4.4.35-1 [235 kB] Get:2 http://ftpmaster.internal/ubuntu mantic/main riscv64 libc6-dev riscv64 2.37-0ubuntu2 [3134 kB] Get:3 http://ftpmaster.internal/ubuntu mantic/main riscv64 libc-dev-bin riscv64 2.37-0ubuntu2 [18.8 kB] Get:4 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcrypt1 riscv64 1:4.4.35-1 [94.6 kB] Get:5 http://ftpmaster.internal/ubuntu mantic/main riscv64 linux-libc-dev riscv64 6.3.0-7.7 [1512 kB] Get:6 http://ftpmaster.internal/ubuntu mantic/main riscv64 libc6 riscv64 2.37-0ubuntu2 [2609 kB] Get:7 http://ftpmaster.internal/ubuntu mantic/main riscv64 libc-bin riscv64 2.37-0ubuntu2 [551 kB] Get:8 http://ftpmaster.internal/ubuntu mantic/main riscv64 gcc-13-base riscv64 13.1.0-6ubuntu1 [42.0 kB] Get:9 http://ftpmaster.internal/ubuntu mantic/main riscv64 libgcc-s1 riscv64 13.1.0-6ubuntu1 [57.2 kB] Get:10 http://ftpmaster.internal/ubuntu mantic/main riscv64 base-files riscv64 13ubuntu1 [73.7 kB] Get:11 http://ftpmaster.internal/ubuntu mantic/main riscv64 bash riscv64 5.2.15-2ubuntu1 [672 kB] Get:12 http://ftpmaster.internal/ubuntu mantic/main riscv64 bsdutils riscv64 1:2.38.1-5ubuntu2 [101 kB] Get:13 http://ftpmaster.internal/ubuntu mantic/main riscv64 coreutils riscv64 9.1-1ubuntu2 [1309 kB] Get:14 http://ftpmaster.internal/ubuntu mantic/main riscv64 liblzma5 riscv64 5.4.1-0.2 [115 kB] Get:15 http://ftpmaster.internal/ubuntu mantic/main riscv64 libgcrypt20 riscv64 1.10.1-3ubuntu1 [503 kB] Get:16 http://ftpmaster.internal/ubuntu mantic/main riscv64 libstdc++6 riscv64 13.1.0-6ubuntu1 [779 kB] Get:17 http://ftpmaster.internal/ubuntu mantic/main riscv64 libacl1 riscv64 2.3.1-3 [15.7 kB] Get:18 http://ftpmaster.internal/ubuntu mantic/main riscv64 libapparmor1 riscv64 3.0.8-1ubuntu3 [43.1 kB] Get:19 http://ftpmaster.internal/ubuntu mantic/main riscv64 libaudit-common all 1:3.0.9-1 [5142 B] Get:20 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcap-ng0 riscv64 0.8.3-1build2 [13.6 kB] Get:21 http://ftpmaster.internal/ubuntu mantic/main riscv64 libaudit1 riscv64 1:3.0.9-1 [44.0 kB] Get:22 http://ftpmaster.internal/ubuntu mantic/main riscv64 libblkid1 riscv64 2.38.1-5ubuntu2 [155 kB] Get:23 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcap2 riscv64 1:2.66-4ubuntu1 [26.5 kB] Get:24 http://ftpmaster.internal/ubuntu mantic/main riscv64 libperl5.36 riscv64 5.36.0-7ubuntu1 [4203 kB] Get:25 http://ftpmaster.internal/ubuntu mantic/main riscv64 perl riscv64 5.36.0-7ubuntu1 [235 kB] Get:26 http://ftpmaster.internal/ubuntu mantic/main riscv64 perl-base riscv64 5.36.0-7ubuntu1 [1655 kB] Get:27 http://ftpmaster.internal/ubuntu mantic/main riscv64 perl-modules-5.36 all 5.36.0-7ubuntu1 [2984 kB] Get:28 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdb5.3 riscv64 5.3.28+dfsg2-1 [691 kB] Get:29 http://ftpmaster.internal/ubuntu mantic/main riscv64 zlib1g riscv64 1:1.2.13.dfsg-1ubuntu4 [54.0 kB] Get:30 http://ftpmaster.internal/ubuntu mantic/main riscv64 debconf all 1.5.82 [125 kB] Get:31 http://ftpmaster.internal/ubuntu mantic/main riscv64 libssl3 riscv64 3.0.9-1ubuntu1 [1453 kB] Get:32 http://ftpmaster.internal/ubuntu mantic/main riscv64 libzstd1 riscv64 1.5.4+dfsg2-5 [310 kB] Get:33 http://ftpmaster.internal/ubuntu mantic/main riscv64 libkmod2 riscv64 30+20221128-1ubuntu1 [43.5 kB] Get:34 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpcre2-8-0 riscv64 10.42-1 [142 kB] Get:35 http://ftpmaster.internal/ubuntu mantic/main riscv64 libselinux1 riscv64 3.4-1build4 [71.6 kB] Get:36 http://ftpmaster.internal/ubuntu mantic/main riscv64 libmount1 riscv64 2.38.1-5ubuntu2 [155 kB] Get:37 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpam0g riscv64 1.5.2-6ubuntu1 [61.6 kB] Get:38 http://ftpmaster.internal/ubuntu mantic/main riscv64 libseccomp2 riscv64 2.5.4-1ubuntu3 [47.0 kB] Get:39 http://ftpmaster.internal/ubuntu mantic/main riscv64 systemd-sysv riscv64 252.5-2ubuntu3 [11.5 kB] Get:40 http://ftpmaster.internal/ubuntu mantic/main riscv64 systemd riscv64 252.5-2ubuntu3 [2815 kB] Get:41 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsystemd-shared riscv64 252.5-2ubuntu3 [1629 kB] Get:42 http://ftpmaster.internal/ubuntu mantic/main riscv64 libatomic1 riscv64 13.1.0-6ubuntu1 [9548 B] Get:43 http://ftpmaster.internal/ubuntu mantic/main riscv64 libargon2-1 riscv64 0~20190702+dfsg-3 [19.9 kB] Get:44 http://ftpmaster.internal/ubuntu mantic/main riscv64 libudev1 riscv64 252.5-2ubuntu3 [143 kB] Get:45 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdevmapper1.02.1 riscv64 2:1.02.185-2ubuntu1 [131 kB] Get:46 http://ftpmaster.internal/ubuntu mantic/main riscv64 libuuid1 riscv64 2.38.1-5ubuntu2 [33.2 kB] Get:47 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcryptsetup12 riscv64 2:2.6.1-4ubuntu1 [210 kB] Get:48 http://ftpmaster.internal/ubuntu mantic/main riscv64 libfdisk1 riscv64 2.38.1-5ubuntu2 [194 kB] Get:49 http://ftpmaster.internal/ubuntu mantic/main riscv64 libp11-kit0 riscv64 0.24.1-2ubuntu1 [196 kB] Get:50 http://ftpmaster.internal/ubuntu mantic/main riscv64 mount riscv64 2.38.1-5ubuntu2 [129 kB] Get:51 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsystemd0 riscv64 252.5-2ubuntu3 [360 kB] Get:52 http://ftpmaster.internal/ubuntu mantic/main riscv64 libapt-pkg6.0 riscv64 2.7.1 [935 kB] Get:53 http://ftpmaster.internal/ubuntu mantic/main riscv64 tar riscv64 1.34+dfsg-1.2ubuntu1 [271 kB] Get:54 http://ftpmaster.internal/ubuntu mantic/main riscv64 dpkg riscv64 1.21.22ubuntu1 [1352 kB] Get:55 http://ftpmaster.internal/ubuntu mantic/main riscv64 dash riscv64 0.5.12-2ubuntu1 [81.8 kB] Get:56 http://ftpmaster.internal/ubuntu mantic/main riscv64 diffutils riscv64 1:3.8-4 [167 kB] Get:57 http://ftpmaster.internal/ubuntu mantic/main riscv64 findutils riscv64 4.9.0-4ubuntu1 [295 kB] Get:58 http://ftpmaster.internal/ubuntu mantic/main riscv64 grep riscv64 3.8-5 [155 kB] Get:59 http://ftpmaster.internal/ubuntu mantic/main riscv64 hostname riscv64 3.23+nmu1ubuntu1 [10.5 kB] Get:60 http://ftpmaster.internal/ubuntu mantic/main riscv64 ncurses-bin riscv64 6.4-4 [177 kB] Get:61 http://ftpmaster.internal/ubuntu mantic/main riscv64 sed riscv64 4.9-1 [191 kB] Get:62 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsmartcols1 riscv64 2.38.1-5ubuntu2 [109 kB] Get:63 http://ftpmaster.internal/ubuntu mantic/main riscv64 util-linux-extra riscv64 2.38.1-5ubuntu2 [104 kB] Get:64 http://ftpmaster.internal/ubuntu mantic/main riscv64 util-linux riscv64 2.38.1-5ubuntu2 [1150 kB] Get:65 http://ftpmaster.internal/ubuntu mantic/main riscv64 ncurses-base all 6.4-4 [23.3 kB] Get:66 http://ftpmaster.internal/ubuntu mantic/main riscv64 sysvinit-utils riscv64 3.06-4ubuntu1 [32.9 kB] Get:67 http://ftpmaster.internal/ubuntu mantic/main riscv64 lsb-base all 11.6 [4606 B] Get:68 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 adduser all 3.134ubuntu1 [136 kB] Get:69 http://ftpmaster.internal/ubuntu mantic/main riscv64 gpgv riscv64 2.2.40-1.1ubuntu1 [205 kB] Get:70 http://ftpmaster.internal/ubuntu mantic/main riscv64 libgnutls30 riscv64 3.7.9-2ubuntu1 [907 kB] Get:71 http://ftpmaster.internal/ubuntu mantic/main riscv64 apt riscv64 2.7.1 [1308 kB] Get:72 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpam-modules-bin riscv64 1.5.2-6ubuntu1 [44.8 kB] Get:73 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpam-modules riscv64 1.5.2-6ubuntu1 [267 kB] Get:74 http://ftpmaster.internal/ubuntu mantic/main riscv64 logsave riscv64 1.47.0-1ubuntu1 [13.7 kB] Get:75 http://ftpmaster.internal/ubuntu mantic/main riscv64 libext2fs2 riscv64 1.47.0-1ubuntu1 [197 kB] Get:76 http://ftpmaster.internal/ubuntu mantic/main riscv64 e2fsprogs riscv64 1.47.0-1ubuntu1 [555 kB] Get:77 http://ftpmaster.internal/ubuntu mantic/main riscv64 libattr1 riscv64 1:2.5.1-4 [11.4 kB] Get:78 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdebconfclient0 riscv64 0.267ubuntu1 [7418 B] Get:79 http://ftpmaster.internal/ubuntu mantic/main riscv64 libmd0 riscv64 1.1.0-1 [28.3 kB] Get:80 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpam-runtime all 1.5.2-6ubuntu1 [41.5 kB] Get:81 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsemanage-common all 3.4-1build4 [9852 B] Get:82 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsepol2 riscv64 3.4-2.1 [258 kB] Get:83 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsemanage2 riscv64 3.4-1build4 [83.5 kB] Get:84 http://ftpmaster.internal/ubuntu mantic/main riscv64 libncurses6 riscv64 6.4-4 [93.2 kB] Get:85 http://ftpmaster.internal/ubuntu mantic/main riscv64 libncursesw6 riscv64 6.4-4 [126 kB] Get:86 http://ftpmaster.internal/ubuntu mantic/main riscv64 libtinfo6 riscv64 6.4-4 [92.6 kB] Get:87 http://ftpmaster.internal/ubuntu mantic/main riscv64 usrmerge all 35ubuntu1 [58.2 kB] Get:88 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcom-err2 riscv64 1.47.0-1ubuntu1 [13.5 kB] Get:89 http://ftpmaster.internal/ubuntu mantic/main riscv64 libproc2-0 riscv64 2:4.0.3-1ubuntu1 [45.2 kB] Get:90 http://ftpmaster.internal/ubuntu mantic/main riscv64 libss2 riscv64 1.47.0-1ubuntu1 [15.2 kB] Get:91 http://ftpmaster.internal/ubuntu mantic/main riscv64 mawk riscv64 1.3.4.20230525-1 [103 kB] Get:92 http://ftpmaster.internal/ubuntu mantic/main riscv64 procps riscv64 2:4.0.3-1ubuntu1 [598 kB] Get:93 http://ftpmaster.internal/ubuntu mantic/main riscv64 sensible-utils all 0.0.20 [19.6 kB] Get:94 http://ftpmaster.internal/ubuntu mantic/main riscv64 openssl riscv64 3.0.9-1ubuntu1 [1149 kB] Get:95 http://ftpmaster.internal/ubuntu mantic/main riscv64 ca-certificates all 20230311ubuntu1 [152 kB] Get:96 http://ftpmaster.internal/ubuntu mantic/main riscv64 libgssapi-krb5-2 riscv64 1.20.1-2 [125 kB] Get:97 http://ftpmaster.internal/ubuntu mantic/main riscv64 libkrb5-3 riscv64 1.20.1-2 [329 kB] Get:98 http://ftpmaster.internal/ubuntu mantic/main riscv64 libkrb5support0 riscv64 1.20.1-2 [31.3 kB] Get:99 http://ftpmaster.internal/ubuntu mantic/main riscv64 libk5crypto3 riscv64 1.20.1-2 [96.5 kB] Get:100 http://ftpmaster.internal/ubuntu mantic/main riscv64 readline-common all 8.2-1.3 [55.7 kB] Get:101 http://ftpmaster.internal/ubuntu mantic/main riscv64 libreadline8 riscv64 8.2-1.3 [131 kB] Get:102 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsqlite3-0 riscv64 3.40.1-2 [586 kB] Get:103 http://ftpmaster.internal/ubuntu mantic/main riscv64 tzdata all 2023c-4exp1ubuntu1 [271 kB] Get:104 http://ftpmaster.internal/ubuntu mantic/main riscv64 xz-utils riscv64 5.4.1-0.2 [266 kB] Get:105 http://ftpmaster.internal/ubuntu mantic/main riscv64 advancecomp riscv64 2.5-1 [216 kB] Get:106 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 libctf0 riscv64 2.40.50.20230622-1ubuntu1 [87.5 kB] Get:107 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 libctf-nobfd0 riscv64 2.40.50.20230622-1ubuntu1 [89.0 kB] Get:108 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 binutils-riscv64-linux-gnu riscv64 2.40.50.20230622-1ubuntu1 [827 kB] Get:109 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 libbinutils riscv64 2.40.50.20230622-1ubuntu1 [460 kB] Get:110 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 binutils riscv64 2.40.50.20230622-1ubuntu1 [2992 B] Get:111 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 binutils-common riscv64 2.40.50.20230622-1ubuntu1 [219 kB] Get:112 http://ftpmaster.internal/ubuntu mantic/main riscv64 libisl23 riscv64 0.26-3 [604 kB] Get:113 http://ftpmaster.internal/ubuntu mantic/main riscv64 libmpfr6 riscv64 4.2.0-1 [260 kB] Get:114 http://ftpmaster.internal/ubuntu mantic/main riscv64 g++-12 riscv64 12.3.0-3ubuntu1 [9551 kB] Get:115 http://ftpmaster.internal/ubuntu mantic/main riscv64 gcc-12 riscv64 12.3.0-3ubuntu1 [16.3 MB] Get:116 http://ftpmaster.internal/ubuntu mantic/main riscv64 cpp-12 riscv64 12.3.0-3ubuntu1 [8279 kB] Get:117 http://ftpmaster.internal/ubuntu mantic/main riscv64 libgomp1 riscv64 13.1.0-6ubuntu1 [140 kB] Get:118 http://ftpmaster.internal/ubuntu mantic/main riscv64 libasan8 riscv64 13.1.0-6ubuntu1 [2500 kB] Get:119 http://ftpmaster.internal/ubuntu mantic/main riscv64 libstdc++-12-dev riscv64 12.3.0-3ubuntu1 [4916 kB] Get:120 http://ftpmaster.internal/ubuntu mantic/main riscv64 libgcc-12-dev riscv64 12.3.0-3ubuntu1 [2637 kB] Get:121 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcc1-0 riscv64 13.1.0-6ubuntu1 [45.4 kB] Get:122 http://ftpmaster.internal/ubuntu mantic/main riscv64 gcc-12-base riscv64 12.3.0-3ubuntu1 [42.8 kB] Get:123 http://ftpmaster.internal/ubuntu mantic/main riscv64 g++ riscv64 4:12.2.0-3ubuntu1 [1108 B] Get:124 http://ftpmaster.internal/ubuntu mantic/main riscv64 gcc riscv64 4:12.2.0-3ubuntu1 [5178 B] Get:125 http://ftpmaster.internal/ubuntu mantic/main riscv64 cpp riscv64 4:12.2.0-3ubuntu1 [27.8 kB] Get:126 http://ftpmaster.internal/ubuntu mantic/main riscv64 dpkg-dev all 1.21.22ubuntu1 [1118 kB] Get:127 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdpkg-perl all 1.21.22ubuntu1 [247 kB] Get:128 http://ftpmaster.internal/ubuntu mantic/main riscv64 lto-disabled-list all 41 [12.4 kB] Get:129 http://ftpmaster.internal/ubuntu mantic/main riscv64 libfakeroot riscv64 1.31-1.2 [27.6 kB] Get:130 http://ftpmaster.internal/ubuntu mantic/main riscv64 fakeroot riscv64 1.31-1.2 [67.9 kB] Get:131 http://ftpmaster.internal/ubuntu mantic/main riscv64 gpg riscv64 2.2.40-1.1ubuntu1 [491 kB] Get:132 http://ftpmaster.internal/ubuntu mantic/main riscv64 gpgconf riscv64 2.2.40-1.1ubuntu1 [121 kB] Get:133 http://ftpmaster.internal/ubuntu mantic/main riscv64 gpg-agent riscv64 2.2.40-1.1ubuntu1 [239 kB] Get:134 http://ftpmaster.internal/ubuntu mantic/main riscv64 pkgbinarymangler all 153 [16.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 93.3 MB in 18s (5050 kB/s) (Reading database ... 13011 files and directories currently installed.) Preparing to unpack .../libcrypt-dev_1%3a4.4.35-1_riscv64.deb ... Unpacking libcrypt-dev:riscv64 (1:4.4.35-1) over (1:4.4.33-1) ... Preparing to unpack .../libc6-dev_2.37-0ubuntu2_riscv64.deb ... Unpacking libc6-dev:riscv64 (2.37-0ubuntu2) over (2.36-0ubuntu4) ... Preparing to unpack .../libc-dev-bin_2.37-0ubuntu2_riscv64.deb ... Unpacking libc-dev-bin (2.37-0ubuntu2) over (2.36-0ubuntu4) ... Preparing to unpack .../libcrypt1_1%3a4.4.35-1_riscv64.deb ... Unpacking libcrypt1:riscv64 (1:4.4.35-1) over (1:4.4.33-1) ... Setting up libcrypt1:riscv64 (1:4.4.35-1) ... (Reading database ... 13011 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_6.3.0-7.7_riscv64.deb ... Unpacking linux-libc-dev:riscv64 (6.3.0-7.7) over (5.19.0-21.21) ... Preparing to unpack .../libc6_2.37-0ubuntu2_riscv64.deb ... Unpacking libc6:riscv64 (2.37-0ubuntu2) over (2.36-0ubuntu4) ... Setting up libc6:riscv64 (2.37-0ubuntu2) ... (Reading database ... 13015 files and directories currently installed.) Preparing to unpack .../libc-bin_2.37-0ubuntu2_riscv64.deb ... Unpacking libc-bin (2.37-0ubuntu2) over (2.36-0ubuntu4) ... Setting up libc-bin (2.37-0ubuntu2) ... Selecting previously unselected package gcc-13-base:riscv64. (Reading database ... 13015 files and directories currently installed.) Preparing to unpack .../gcc-13-base_13.1.0-6ubuntu1_riscv64.deb ... Unpacking gcc-13-base:riscv64 (13.1.0-6ubuntu1) ... Setting up gcc-13-base:riscv64 (13.1.0-6ubuntu1) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libgcc-s1_13.1.0-6ubuntu1_riscv64.deb ... Unpacking libgcc-s1:riscv64 (13.1.0-6ubuntu1) over (12.2.0-10ubuntu1) ... Setting up libgcc-s1:riscv64 (13.1.0-6ubuntu1) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../base-files_13ubuntu1_riscv64.deb ... Unpacking base-files (13ubuntu1) over (12.3ubuntu1) ... Setting up base-files (13ubuntu1) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../bash_5.2.15-2ubuntu1_riscv64.deb ... Unpacking bash (5.2.15-2ubuntu1) over (5.2-1ubuntu2) ... Setting up bash (5.2.15-2ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.38.1-5ubuntu2_riscv64.deb ... Unpacking bsdutils (1:2.38.1-5ubuntu2) over (1:2.38.1-4ubuntu1) ... Setting up bsdutils (1:2.38.1-5ubuntu2) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../coreutils_9.1-1ubuntu2_riscv64.deb ... Unpacking coreutils (9.1-1ubuntu2) over (8.32-4.1ubuntu1) ... Setting up coreutils (9.1-1ubuntu2) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../liblzma5_5.4.1-0.2_riscv64.deb ... Unpacking liblzma5:riscv64 (5.4.1-0.2) over (5.2.9-0.0) ... Setting up liblzma5:riscv64 (5.4.1-0.2) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.10.1-3ubuntu1_riscv64.deb ... Unpacking libgcrypt20:riscv64 (1.10.1-3ubuntu1) over (1.10.1-2ubuntu1) ... Setting up libgcrypt20:riscv64 (1.10.1-3ubuntu1) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libstdc++6_13.1.0-6ubuntu1_riscv64.deb ... Unpacking libstdc++6:riscv64 (13.1.0-6ubuntu1) over (12.2.0-10ubuntu1) ... Setting up libstdc++6:riscv64 (13.1.0-6ubuntu1) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libacl1_2.3.1-3_riscv64.deb ... Unpacking libacl1:riscv64 (2.3.1-3) over (2.3.1-2) ... Setting up libacl1:riscv64 (2.3.1-3) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.0.8-1ubuntu3_riscv64.deb ... Unpacking libapparmor1:riscv64 (3.0.8-1ubuntu3) over (3.0.8-1ubuntu1) ... Preparing to unpack .../libaudit-common_1%3a3.0.9-1_all.deb ... Unpacking libaudit-common (1:3.0.9-1) over (1:3.0.7-1ubuntu3) ... Setting up libaudit-common (1:3.0.9-1) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.3-1build2_riscv64.deb ... Unpacking libcap-ng0:riscv64 (0.8.3-1build2) over (0.8.3-1build1) ... Setting up libcap-ng0:riscv64 (0.8.3-1build2) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a3.0.9-1_riscv64.deb ... Unpacking libaudit1:riscv64 (1:3.0.9-1) over (1:3.0.7-1ubuntu3) ... Setting up libaudit1:riscv64 (1:3.0.9-1) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libblkid1_2.38.1-5ubuntu2_riscv64.deb ... Unpacking libblkid1:riscv64 (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Setting up libblkid1:riscv64 (2.38.1-5ubuntu2) ... (Reading database ... 13020 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.66-4ubuntu1_riscv64.deb ... Unpacking libcap2:riscv64 (1:2.66-4ubuntu1) over (1:2.44-1build3) ... Setting up libcap2:riscv64 (1:2.66-4ubuntu1) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../libperl5.36_5.36.0-7ubuntu1_riscv64.deb ... Unpacking libperl5.36:riscv64 (5.36.0-7ubuntu1) over (5.36.0-4ubuntu2) ... Preparing to unpack .../perl_5.36.0-7ubuntu1_riscv64.deb ... Unpacking perl (5.36.0-7ubuntu1) over (5.36.0-4ubuntu2) ... Preparing to unpack .../perl-base_5.36.0-7ubuntu1_riscv64.deb ... Unpacking perl-base (5.36.0-7ubuntu1) over (5.36.0-4ubuntu2) ... Setting up perl-base (5.36.0-7ubuntu1) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../perl-modules-5.36_5.36.0-7ubuntu1_all.deb ... Unpacking perl-modules-5.36 (5.36.0-7ubuntu1) over (5.36.0-4ubuntu2) ... Preparing to unpack .../libdb5.3_5.3.28+dfsg2-1_riscv64.deb ... Unpacking libdb5.3:riscv64 (5.3.28+dfsg2-1) over (5.3.28+dfsg1-0.10) ... Setting up libdb5.3:riscv64 (5.3.28+dfsg2-1) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.13.dfsg-1ubuntu4_riscv64.deb ... Unpacking zlib1g:riscv64 (1:1.2.13.dfsg-1ubuntu4) over (1:1.2.11.dfsg-4.1ubuntu1) ... Setting up zlib1g:riscv64 (1:1.2.13.dfsg-1ubuntu4) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../debconf_1.5.82_all.deb ... Unpacking debconf (1.5.82) over (1.5.79ubuntu1) ... Setting up debconf (1.5.82) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../libssl3_3.0.9-1ubuntu1_riscv64.deb ... Unpacking libssl3:riscv64 (3.0.9-1ubuntu1) over (3.0.5-2ubuntu2) ... Preparing to unpack .../libzstd1_1.5.4+dfsg2-5_riscv64.deb ... Unpacking libzstd1:riscv64 (1.5.4+dfsg2-5) over (1.5.2+dfsg-1) ... Setting up libzstd1:riscv64 (1.5.4+dfsg2-5) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../libkmod2_30+20221128-1ubuntu1_riscv64.deb ... Unpacking libkmod2:riscv64 (30+20221128-1ubuntu1) over (30+20220905-1ubuntu1) ... Preparing to unpack .../libpcre2-8-0_10.42-1_riscv64.deb ... Unpacking libpcre2-8-0:riscv64 (10.42-1) over (10.40-1ubuntu1) ... Setting up libpcre2-8-0:riscv64 (10.42-1) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../libselinux1_3.4-1build4_riscv64.deb ... Unpacking libselinux1:riscv64 (3.4-1build4) over (3.4-1build1) ... Setting up libselinux1:riscv64 (3.4-1build4) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../libmount1_2.38.1-5ubuntu2_riscv64.deb ... Unpacking libmount1:riscv64 (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Setting up libmount1:riscv64 (2.38.1-5ubuntu2) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../libpam0g_1.5.2-6ubuntu1_riscv64.deb ... Unpacking libpam0g:riscv64 (1.5.2-6ubuntu1) over (1.5.2-5ubuntu1) ... Setting up libpam0g:riscv64 (1.5.2-6ubuntu1) ... (Reading database ... 13022 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.4-1ubuntu3_riscv64.deb ... Unpacking libseccomp2:riscv64 (2.5.4-1ubuntu3) over (2.5.4-1ubuntu2) ... Preparing to unpack .../systemd-sysv_252.5-2ubuntu3_riscv64.deb ... Unpacking systemd-sysv (252.5-2ubuntu3) over (251.4-1ubuntu7) ... Setting up libssl3:riscv64 (3.0.9-1ubuntu1) ... (Reading database ... 13023 files and directories currently installed.) Preparing to unpack .../systemd_252.5-2ubuntu3_riscv64.deb ... Unpacking systemd (252.5-2ubuntu3) over (251.4-1ubuntu7) ... Preparing to unpack .../libsystemd-shared_252.5-2ubuntu3_riscv64.deb ... Unpacking libsystemd-shared:riscv64 (252.5-2ubuntu3) over (251.4-1ubuntu7) ... Preparing to unpack .../libatomic1_13.1.0-6ubuntu1_riscv64.deb ... Unpacking libatomic1:riscv64 (13.1.0-6ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../libargon2-1_0~20190702+dfsg-3_riscv64.deb ... Unpacking libargon2-1:riscv64 (0~20190702+dfsg-3) over (0~20171227-0.3) ... Preparing to unpack .../libudev1_252.5-2ubuntu3_riscv64.deb ... Unpacking libudev1:riscv64 (252.5-2ubuntu3) over (251.4-1ubuntu7) ... Setting up libudev1:riscv64 (252.5-2ubuntu3) ... (Reading database ... 13054 files and directories currently installed.) Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.185-2ubuntu1_riscv64.deb ... Unpacking libdevmapper1.02.1:riscv64 (2:1.02.185-2ubuntu1) over (2:1.02.185-1ubuntu1) ... Preparing to unpack .../libuuid1_2.38.1-5ubuntu2_riscv64.deb ... Unpacking libuuid1:riscv64 (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Setting up libuuid1:riscv64 (2.38.1-5ubuntu2) ... (Reading database ... 13054 files and directories currently installed.) Preparing to unpack .../libcryptsetup12_2%3a2.6.1-4ubuntu1_riscv64.deb ... Unpacking libcryptsetup12:riscv64 (2:2.6.1-4ubuntu1) over (2:2.5.0-6ubuntu3) ... Preparing to unpack .../libfdisk1_2.38.1-5ubuntu2_riscv64.deb ... Unpacking libfdisk1:riscv64 (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Preparing to unpack .../libp11-kit0_0.24.1-2ubuntu1_riscv64.deb ... Unpacking libp11-kit0:riscv64 (0.24.1-2ubuntu1) over (0.24.1-1ubuntu2) ... Setting up libp11-kit0:riscv64 (0.24.1-2ubuntu1) ... (Reading database ... 13054 files and directories currently installed.) Preparing to unpack .../mount_2.38.1-5ubuntu2_riscv64.deb ... Unpacking mount (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Preparing to unpack .../libsystemd0_252.5-2ubuntu3_riscv64.deb ... Unpacking libsystemd0:riscv64 (252.5-2ubuntu3) over (251.4-1ubuntu7) ... Setting up libsystemd0:riscv64 (252.5-2ubuntu3) ... (Reading database ... 13055 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.7.1_riscv64.deb ... Unpacking libapt-pkg6.0:riscv64 (2.7.1) over (2.5.4) ... Setting up libapt-pkg6.0:riscv64 (2.7.1) ... (Reading database ... 13055 files and directories currently installed.) Preparing to unpack .../tar_1.34+dfsg-1.2ubuntu1_riscv64.deb ... Unpacking tar (1.34+dfsg-1.2ubuntu1) over (1.34+dfsg-1.1) ... Setting up tar (1.34+dfsg-1.2ubuntu1) ... (Reading database ... 13055 files and directories currently installed.) Preparing to unpack .../dpkg_1.21.22ubuntu1_riscv64.deb ... Unpacking dpkg (1.21.22ubuntu1) over (1.21.11ubuntu2) ... Setting up dpkg (1.21.22ubuntu1) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../dash_0.5.12-2ubuntu1_riscv64.deb ... Unpacking dash (0.5.12-2ubuntu1) over (0.5.11+git20210903+057cd650a4ed-9ubuntu1) ... Setting up dash (0.5.12-2ubuntu1) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.8-4_riscv64.deb ... Unpacking diffutils (1:3.8-4) over (1:3.8-1) ... Setting up diffutils (1:3.8-4) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../findutils_4.9.0-4ubuntu1_riscv64.deb ... Unpacking findutils (4.9.0-4ubuntu1) over (4.9.0-3ubuntu1) ... Setting up findutils (4.9.0-4ubuntu1) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../grep_3.8-5_riscv64.deb ... Unpacking grep (3.8-5) over (3.8-3) ... Setting up grep (3.8-5) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../hostname_3.23+nmu1ubuntu1_riscv64.deb ... Unpacking hostname (3.23+nmu1ubuntu1) over (3.23ubuntu2) ... Setting up hostname (3.23+nmu1ubuntu1) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.4-4_riscv64.deb ... Unpacking ncurses-bin (6.4-4) over (6.3+20220423-2) ... Setting up ncurses-bin (6.4-4) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../archives/sed_4.9-1_riscv64.deb ... Unpacking sed (4.9-1) over (4.8-1ubuntu2) ... Setting up sed (4.9-1) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.38.1-5ubuntu2_riscv64.deb ... Unpacking libsmartcols1:riscv64 (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Setting up libsmartcols1:riscv64 (2.38.1-5ubuntu2) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.38.1-5ubuntu2_riscv64.deb ... Unpacking util-linux-extra (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Setting up util-linux-extra (2.38.1-5ubuntu2) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../util-linux_2.38.1-5ubuntu2_riscv64.deb ... Unpacking util-linux (2.38.1-5ubuntu2) over (2.38.1-4ubuntu1) ... Setting up util-linux (2.38.1-5ubuntu2) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.4-4_all.deb ... Unpacking ncurses-base (6.4-4) over (6.3+20220423-2) ... Setting up ncurses-base (6.4-4) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../archives/lsb-base_11.6_all.deb ... Unpacking lsb-base (11.6) over (11.2ubuntu1) ... Preparing to unpack .../sysvinit-utils_3.06-4ubuntu1_riscv64.deb ... Unpacking sysvinit-utils (3.06-4ubuntu1) over (3.04-1ubuntu1) ... Setting up sysvinit-utils (3.06-4ubuntu1) ... (Reading database ... 13058 files and directories currently installed.) Preparing to unpack .../adduser_3.134ubuntu1_all.deb ... moving unchanged adduser.conf to adduser.conf.update-old. New dpkg-conffile will come from the package. Unpacking adduser (3.134ubuntu1) over (3.121ubuntu1) ... Setting up adduser (3.134ubuntu1) ... Installing new version of config file /etc/deluser.conf ... (Reading database ... 13028 files and directories currently installed.) Preparing to unpack .../gpgv_2.2.40-1.1ubuntu1_riscv64.deb ... Unpacking gpgv (2.2.40-1.1ubuntu1) over (2.2.40-1ubuntu1) ... Setting up gpgv (2.2.40-1.1ubuntu1) ... (Reading database ... 13028 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.9-2ubuntu1_riscv64.deb ... Unpacking libgnutls30:riscv64 (3.7.9-2ubuntu1) over (3.7.7-2ubuntu2) ... Setting up libgnutls30:riscv64 (3.7.9-2ubuntu1) ... (Reading database ... 13028 files and directories currently installed.) Preparing to unpack .../archives/apt_2.7.1_riscv64.deb ... Unpacking apt (2.7.1) over (2.5.4) ... Setting up apt (2.7.1) ... Installing new version of config file /etc/apt/apt.conf.d/01autoremove ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.5.2-6ubuntu1_riscv64.deb ... Unpacking libpam-modules-bin (1.5.2-6ubuntu1) over (1.5.2-5ubuntu1) ... Setting up libpam-modules-bin (1.5.2-6ubuntu1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.5.2-6ubuntu1_riscv64.deb ... Unpacking libpam-modules:riscv64 (1.5.2-6ubuntu1) over (1.5.2-5ubuntu1) ... Setting up libpam-modules:riscv64 (1.5.2-6ubuntu1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../logsave_1.47.0-1ubuntu1_riscv64.deb ... Unpacking logsave (1.47.0-1ubuntu1) over (1.46.6~rc1-1ubuntu1) ... Preparing to unpack .../libext2fs2_1.47.0-1ubuntu1_riscv64.deb ... Unpacking libext2fs2:riscv64 (1.47.0-1ubuntu1) over (1.46.6~rc1-1ubuntu1) ... Setting up libext2fs2:riscv64 (1.47.0-1ubuntu1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.0-1ubuntu1_riscv64.deb ... Unpacking e2fsprogs (1.47.0-1ubuntu1) over (1.46.6~rc1-1ubuntu1) ... Preparing to unpack .../libattr1_1%3a2.5.1-4_riscv64.deb ... Unpacking libattr1:riscv64 (1:2.5.1-4) over (1:2.5.1-3) ... Setting up libattr1:riscv64 (1:2.5.1-4) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.267ubuntu1_riscv64.deb ... Unpacking libdebconfclient0:riscv64 (0.267ubuntu1) over (0.264ubuntu1) ... Setting up libdebconfclient0:riscv64 (0.267ubuntu1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libmd0_1.1.0-1_riscv64.deb ... Unpacking libmd0:riscv64 (1.1.0-1) over (1.0.4-2) ... Setting up libmd0:riscv64 (1.1.0-1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.5.2-6ubuntu1_all.deb ... Unpacking libpam-runtime (1.5.2-6ubuntu1) over (1.5.2-5ubuntu1) ... Setting up libpam-runtime (1.5.2-6ubuntu1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libsemanage-common_3.4-1build4_all.deb ... Unpacking libsemanage-common (3.4-1build4) over (3.4-1build1) ... Setting up libsemanage-common (3.4-1build4) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libsepol2_3.4-2.1_riscv64.deb ... Unpacking libsepol2:riscv64 (3.4-2.1) over (3.4-2) ... Setting up libsepol2:riscv64 (3.4-2.1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libsemanage2_3.4-1build4_riscv64.deb ... Unpacking libsemanage2:riscv64 (3.4-1build4) over (3.4-1build1) ... Setting up libsemanage2:riscv64 (3.4-1build4) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../libncurses6_6.4-4_riscv64.deb ... Unpacking libncurses6:riscv64 (6.4-4) over (6.3+20220423-2) ... Preparing to unpack .../libncursesw6_6.4-4_riscv64.deb ... Unpacking libncursesw6:riscv64 (6.4-4) over (6.3+20220423-2) ... Preparing to unpack .../libtinfo6_6.4-4_riscv64.deb ... Unpacking libtinfo6:riscv64 (6.4-4) over (6.3+20220423-2) ... Setting up libtinfo6:riscv64 (6.4-4) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../usrmerge_35ubuntu1_all.deb ... Unpacking usrmerge (35ubuntu1) over (33ubuntu1) ... Setting up usrmerge (35ubuntu1) ... (Reading database ... 13025 files and directories currently installed.) Preparing to unpack .../00-libcom-err2_1.47.0-1ubuntu1_riscv64.deb ... Unpacking libcom-err2:riscv64 (1.47.0-1ubuntu1) over (1.46.6~rc1-1ubuntu1) ... Selecting previously unselected package libproc2-0:riscv64. Preparing to unpack .../01-libproc2-0_2%3a4.0.3-1ubuntu1_riscv64.deb ... Unpacking libproc2-0:riscv64 (2:4.0.3-1ubuntu1) ... Preparing to unpack .../02-libss2_1.47.0-1ubuntu1_riscv64.deb ... Unpacking libss2:riscv64 (1.47.0-1ubuntu1) over (1.46.6~rc1-1ubuntu1) ... Preparing to unpack .../03-mawk_1.3.4.20230525-1_riscv64.deb ... Unpacking mawk (1.3.4.20230525-1) over (1.3.4.20200120-3.1) ... Preparing to unpack .../04-procps_2%3a4.0.3-1ubuntu1_riscv64.deb ... Unpacking procps (2:4.0.3-1ubuntu1) over (2:3.3.17-7ubuntu1) ... Preparing to unpack .../05-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) over (0.0.17) ... Preparing to unpack .../06-openssl_3.0.9-1ubuntu1_riscv64.deb ... Unpacking openssl (3.0.9-1ubuntu1) over (3.0.5-2ubuntu2) ... Preparing to unpack .../07-ca-certificates_20230311ubuntu1_all.deb ... Unpacking ca-certificates (20230311ubuntu1) over (20211016ubuntu1) ... Preparing to unpack .../08-libgssapi-krb5-2_1.20.1-2_riscv64.deb ... Unpacking libgssapi-krb5-2:riscv64 (1.20.1-2) over (1.20.1-1build1) ... Preparing to unpack .../09-libkrb5-3_1.20.1-2_riscv64.deb ... Unpacking libkrb5-3:riscv64 (1.20.1-2) over (1.20.1-1build1) ... Preparing to unpack .../10-libkrb5support0_1.20.1-2_riscv64.deb ... Unpacking libkrb5support0:riscv64 (1.20.1-2) over (1.20.1-1build1) ... Preparing to unpack .../11-libk5crypto3_1.20.1-2_riscv64.deb ... Unpacking libk5crypto3:riscv64 (1.20.1-2) over (1.20.1-1build1) ... Preparing to unpack .../12-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) over (8.2-1.2) ... Preparing to unpack .../13-libreadline8_8.2-1.3_riscv64.deb ... Unpacking libreadline8:riscv64 (8.2-1.3) over (8.2-1.2) ... Preparing to unpack .../14-libsqlite3-0_3.40.1-2_riscv64.deb ... Unpacking libsqlite3-0:riscv64 (3.40.1-2) over (3.40.0-1) ... Preparing to unpack .../15-tzdata_2023c-4exp1ubuntu1_all.deb ... Unpacking tzdata (2023c-4exp1ubuntu1) over (2022g-1ubuntu1) ... Preparing to unpack .../16-xz-utils_5.4.1-0.2_riscv64.deb ... Unpacking xz-utils (5.4.1-0.2) over (5.2.9-0.0) ... Preparing to unpack .../17-advancecomp_2.5-1_riscv64.deb ... Unpacking advancecomp (2.5-1) over (2.4-1) ... Preparing to unpack .../18-libctf0_2.40.50.20230622-1ubuntu1_riscv64.deb ... Unpacking libctf0:riscv64 (2.40.50.20230622-1ubuntu1) over (2.39.50.20221224-1ubuntu1) ... Preparing to unpack .../19-libctf-nobfd0_2.40.50.20230622-1ubuntu1_riscv64.deb ... Unpacking libctf-nobfd0:riscv64 (2.40.50.20230622-1ubuntu1) over (2.39.50.20221224-1ubuntu1) ... Preparing to unpack .../20-binutils-riscv64-linux-gnu_2.40.50.20230622-1ubuntu1_riscv64.deb ... Unpacking binutils-riscv64-linux-gnu (2.40.50.20230622-1ubuntu1) over (2.39.50.20221224-1ubuntu1) ... Preparing to unpack .../21-libbinutils_2.40.50.20230622-1ubuntu1_riscv64.deb ... Unpacking libbinutils:riscv64 (2.40.50.20230622-1ubuntu1) over (2.39.50.20221224-1ubuntu1) ... Preparing to unpack .../22-binutils_2.40.50.20230622-1ubuntu1_riscv64.deb ... Unpacking binutils (2.40.50.20230622-1ubuntu1) over (2.39.50.20221224-1ubuntu1) ... Preparing to unpack .../23-binutils-common_2.40.50.20230622-1ubuntu1_riscv64.deb ... Unpacking binutils-common:riscv64 (2.40.50.20230622-1ubuntu1) over (2.39.50.20221224-1ubuntu1) ... Preparing to unpack .../24-libisl23_0.26-3_riscv64.deb ... Unpacking libisl23:riscv64 (0.26-3) over (0.25-1) ... Preparing to unpack .../25-libmpfr6_4.2.0-1_riscv64.deb ... Unpacking libmpfr6:riscv64 (4.2.0-1) over (4.1.0-3build3) ... Preparing to unpack .../26-g++-12_12.3.0-3ubuntu1_riscv64.deb ... Unpacking g++-12 (12.3.0-3ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../27-gcc-12_12.3.0-3ubuntu1_riscv64.deb ... Unpacking gcc-12 (12.3.0-3ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../28-cpp-12_12.3.0-3ubuntu1_riscv64.deb ... Unpacking cpp-12 (12.3.0-3ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../29-libgomp1_13.1.0-6ubuntu1_riscv64.deb ... Unpacking libgomp1:riscv64 (13.1.0-6ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../30-libasan8_13.1.0-6ubuntu1_riscv64.deb ... Unpacking libasan8:riscv64 (13.1.0-6ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../31-libstdc++-12-dev_12.3.0-3ubuntu1_riscv64.deb ... Unpacking libstdc++-12-dev:riscv64 (12.3.0-3ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../32-libgcc-12-dev_12.3.0-3ubuntu1_riscv64.deb ... Unpacking libgcc-12-dev:riscv64 (12.3.0-3ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../33-libcc1-0_13.1.0-6ubuntu1_riscv64.deb ... Unpacking libcc1-0:riscv64 (13.1.0-6ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../34-gcc-12-base_12.3.0-3ubuntu1_riscv64.deb ... Unpacking gcc-12-base:riscv64 (12.3.0-3ubuntu1) over (12.2.0-10ubuntu1) ... Preparing to unpack .../35-g++_4%3a12.2.0-3ubuntu1_riscv64.deb ... Unpacking g++ (4:12.2.0-3ubuntu1) over (4:12.2.0-1ubuntu1) ... Preparing to unpack .../36-gcc_4%3a12.2.0-3ubuntu1_riscv64.deb ... Unpacking gcc (4:12.2.0-3ubuntu1) over (4:12.2.0-1ubuntu1) ... Preparing to unpack .../37-cpp_4%3a12.2.0-3ubuntu1_riscv64.deb ... Unpacking cpp (4:12.2.0-3ubuntu1) over (4:12.2.0-1ubuntu1) ... Preparing to unpack .../38-dpkg-dev_1.21.22ubuntu1_all.deb ... Unpacking dpkg-dev (1.21.22ubuntu1) over (1.21.11ubuntu2) ... Preparing to unpack .../39-libdpkg-perl_1.21.22ubuntu1_all.deb ... Unpacking libdpkg-perl (1.21.22ubuntu1) over (1.21.11ubuntu2) ... Preparing to unpack .../40-lto-disabled-list_41_all.deb ... Unpacking lto-disabled-list (41) over (37) ... Preparing to unpack .../41-libfakeroot_1.31-1.2_riscv64.deb ... Unpacking libfakeroot:riscv64 (1.31-1.2) over (1.30.1-1ubuntu1) ... Preparing to unpack .../42-fakeroot_1.31-1.2_riscv64.deb ... Unpacking fakeroot (1.31-1.2) over (1.30.1-1ubuntu1) ... Preparing to unpack .../43-gpg_2.2.40-1.1ubuntu1_riscv64.deb ... Unpacking gpg (2.2.40-1.1ubuntu1) over (2.2.40-1ubuntu1) ... Preparing to unpack .../44-gpgconf_2.2.40-1.1ubuntu1_riscv64.deb ... Unpacking gpgconf (2.2.40-1.1ubuntu1) over (2.2.40-1ubuntu1) ... Preparing to unpack .../45-gpg-agent_2.2.40-1.1ubuntu1_riscv64.deb ... Unpacking gpg-agent (2.2.40-1.1ubuntu1) over (2.2.40-1ubuntu1) ... Preparing to unpack .../46-pkgbinarymangler_153_all.deb ... Unpacking pkgbinarymangler (153) over (149) ... Setting up lsb-base (11.6) ... Setting up lto-disabled-list (41) ... Setting up libapparmor1:riscv64 (3.0.8-1ubuntu3) ... Setting up libargon2-1:riscv64 (0~20190702+dfsg-3) ... Setting up libsqlite3-0:riscv64 (3.40.1-2) ... Setting up binutils-common:riscv64 (2.40.50.20230622-1ubuntu1) ... Setting up linux-libc-dev:riscv64 (6.3.0-7.7) ... Setting up libctf-nobfd0:riscv64 (2.40.50.20230622-1ubuntu1) ... Setting up libcom-err2:riscv64 (1.47.0-1ubuntu1) ... Setting up libgomp1:riscv64 (13.1.0-6ubuntu1) ... Setting up libseccomp2:riscv64 (2.5.4-1ubuntu3) ... Setting up libfakeroot:riscv64 (1.31-1.2) ... Setting up libkrb5support0:riscv64 (1.20.1-2) ... Setting up gcc-12-base:riscv64 (12.3.0-3ubuntu1) ... Setting up tzdata (2023c-4exp1ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Jun 23 07:14:22 UTC 2023. Universal Time is now: Fri Jun 23 07:14:22 UTC 2023. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up fakeroot (1.31-1.2) ... Setting up perl-modules-5.36 (5.36.0-7ubuntu1) ... Setting up libmpfr6:riscv64 (4.2.0-1) ... Setting up libncurses6:riscv64 (6.4-4) ... Setting up xz-utils (5.4.1-0.2) ... Setting up libproc2-0:riscv64 (2:4.0.3-1ubuntu1) ... Setting up libatomic1:riscv64 (13.1.0-6ubuntu1) ... Setting up libss2:riscv64 (1.47.0-1ubuntu1) ... Setting up libncursesw6:riscv64 (6.4-4) ... Setting up libk5crypto3:riscv64 (1.20.1-2) ... Setting up logsave (1.47.0-1ubuntu1) ... Setting up libfdisk1:riscv64 (2.38.1-5ubuntu2) ... Setting up advancecomp (2.5-1) ... Setting up libdevmapper1.02.1:riscv64 (2:1.02.185-2ubuntu1) ... Setting up mount (2.38.1-5ubuntu2) ... Setting up sensible-utils (0.0.20) ... Setting up libcrypt-dev:riscv64 (1:4.4.35-1) ... Setting up libasan8:riscv64 (13.1.0-6ubuntu1) ... Setting up procps (2:4.0.3-1ubuntu1) ... Setting up libcryptsetup12:riscv64 (2:2.6.1-4ubuntu1) ... Setting up mawk (1.3.4.20230525-1) ... Setting up libkrb5-3:riscv64 (1.20.1-2) ... Setting up libbinutils:riscv64 (2.40.50.20230622-1ubuntu1) ... Setting up libisl23:riscv64 (0.26-3) ... Setting up libc-dev-bin (2.37-0ubuntu2) ... Setting up openssl (3.0.9-1ubuntu1) ... Installing new version of config file /etc/ssl/openssl.cnf ... Setting up readline-common (8.2-1.3) ... Setting up libcc1-0:riscv64 (13.1.0-6ubuntu1) ... Setting up libperl5.36:riscv64 (5.36.0-7ubuntu1) ... Setting up libkmod2:riscv64 (30+20221128-1ubuntu1) ... Setting up libctf0:riscv64 (2.40.50.20230622-1ubuntu1) ... Setting up cpp-12 (12.3.0-3ubuntu1) ... Setting up pkgbinarymangler (153) ... Setting up libreadline8:riscv64 (8.2-1.3) ... Setting up binutils-riscv64-linux-gnu (2.40.50.20230622-1ubuntu1) ... Setting up e2fsprogs (1.47.0-1ubuntu1) ... Installing new version of config file /etc/mke2fs.conf ... Setting up binutils (2.40.50.20230622-1ubuntu1) ... Setting up ca-certificates (20230311ubuntu1) ... Updating certificates in /etc/ssl/certs... rehash: warning: skipping ca-certificates.crt,it does not contain exactly one certificate or CRL 19 added, 6 removed; done. Setting up perl (5.36.0-7ubuntu1) ... Setting up libgcc-12-dev:riscv64 (12.3.0-3ubuntu1) ... Setting up libgssapi-krb5-2:riscv64 (1.20.1-2) ... Setting up libsystemd-shared:riscv64 (252.5-2ubuntu3) ... Setting up libdpkg-perl (1.21.22ubuntu1) ... Setting up cpp (4:12.2.0-3ubuntu1) ... Setting up gpgconf (2.2.40-1.1ubuntu1) ... Setting up libc6-dev:riscv64 (2.37-0ubuntu2) ... Setting up gpg (2.2.40-1.1ubuntu1) ... Setting up gpg-agent (2.2.40-1.1ubuntu1) ... Setting up libstdc++-12-dev:riscv64 (12.3.0-3ubuntu1) ... Setting up systemd (252.5-2ubuntu3) ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from random generator. Setting up dpkg-dev (1.21.22ubuntu1) ... Setting up gcc-12 (12.3.0-3ubuntu1) ... Setting up g++-12 (12.3.0-3ubuntu1) ... Setting up systemd-sysv (252.5-2ubuntu3) ... Setting up gcc (4:12.2.0-3ubuntu1) ... Setting up g++ (4:12.2.0-3ubuntu1) ... Processing triggers for libc-bin (2.37-0ubuntu2) ... Processing triggers for debianutils (5.7-0.4) ... Processing triggers for ca-certificates (20230311ubuntu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-26332610 riscv64 mantic-proposed -c chroot:build-PACKAGEBUILD-26332610 --arch=riscv64 --dist=mantic-proposed --nolog samtools_1.17-1.dsc Initiating build PACKAGEBUILD-26332610 with 8 jobs across 8 processor cores. Kernel reported to sbuild: 5.13.0-1019-generic #21~20.04.1-Ubuntu SMP Thu Mar 24 22:36:01 UTC 2022 riscv64 sbuild (Debian sbuild) 0.79.0 (05 February 2020) on riscv64-qemu-lgw01-009.buildd +==============================================================================+ | samtools 1.17-1 (riscv64) Fri, 23 Jun 2023 07:16:39 +0000 | +==============================================================================+ Package: samtools Version: 1.17-1 Source Version: 1.17-1 Distribution: mantic-proposed Machine Architecture: riscv64 Host Architecture: riscv64 Build Architecture: riscv64 Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-26332610/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/samtools-cUFcTp/resolver-qdsFat' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- samtools_1.17-1.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/samtools-cUFcTp/samtools-1.17' with '<>' I: NOTICE: Log filtering will replace 'build/samtools-cUFcTp' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), bash-completion, libio-pty-perl, libncurses-dev, libhts-dev (>= 1.17~), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix, liblzma-dev, libbz2-dev, build-essential, fakeroot Filtered Build-Depends: debhelper-compat (= 13), bash-completion, libio-pty-perl, libncurses-dev, libhts-dev (>= 1.17~), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix, liblzma-dev, libbz2-dev, build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [461 B] Get:5 copy:/<>/apt_archive ./ Packages [538 B] Fetched 1956 B in 1s (2905 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bash-completion bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbrotli1 libbz2-dev libcurl3-gnutls libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libelf1 libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu72 libio-pty-perl libldap2 liblzma-dev libmagic-mgc libmagic1 libncurses-dev libnghttp2-14 libpipeline1 libpkgconf3 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config pkgconf pkgconf-bin po-debconf tabix zlib1g-dev Suggested packages: gnu-standards autoconf-doc dh-make gettext-doc libasprintf-dev libgettextpo-dev groff libcurl4-doc libgnutls28-dev libidn-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev liblzma-doc ncurses-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc libarchive-cpio-perl libldap-common publicsuffix libsasl2-modules libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf autoconf-archive automake autopoint autotools-dev bash-completion bsdextrautils debhelper debugedit dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libbrotli1 libbz2-dev libcurl3-gnutls libcurl4-gnutls-dev libdebhelper-perl libdeflate-dev libdeflate0 libdw1 libelf1 libfile-stripnondeterminism-perl libhts-dev libhts3 libhtscodecs2 libicu72 libio-pty-perl libldap2 liblzma-dev libmagic-mgc libmagic1 libncurses-dev libnghttp2-14 libpipeline1 libpkgconf3 libpsl5 librtmp1 libsasl2-2 libsasl2-modules-db libssh-4 libsub-override-perl libtool libuchardet0 libxml2 m4 man-db pkg-config pkgconf pkgconf-bin po-debconf sbuild-build-depends-main-dummy tabix zlib1g-dev 0 upgraded, 59 newly installed, 0 to remove and 0 not upgraded. Need to get 28.3 MB of archives. After this operation, 127 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [760 B] Get:2 http://ftpmaster.internal/ubuntu mantic/universe riscv64 autoconf-archive all 20220903-3 [681 kB] Get:3 http://ftpmaster.internal/ubuntu mantic/main riscv64 libelf1 riscv64 0.188-2.1 [49.1 kB] Get:4 http://ftpmaster.internal/ubuntu mantic/main riscv64 libicu72 riscv64 72.1-3ubuntu2 [10.7 MB] Get:5 http://ftpmaster.internal/ubuntu mantic/main riscv64 libxml2 riscv64 2.9.14+dfsg-1.2 [600 kB] Get:6 http://ftpmaster.internal/ubuntu mantic/main riscv64 bash-completion all 1:2.11-6ubuntu1 [179 kB] Get:7 http://ftpmaster.internal/ubuntu mantic/main riscv64 bsdextrautils riscv64 2.38.1-5ubuntu2 [81.4 kB] Get:8 http://ftpmaster.internal/ubuntu mantic/main riscv64 libmagic-mgc riscv64 1:5.44-3 [293 kB] Get:9 http://ftpmaster.internal/ubuntu mantic/main riscv64 libmagic1 riscv64 1:5.44-3 [85.1 kB] Get:10 http://ftpmaster.internal/ubuntu mantic/main riscv64 file riscv64 1:5.44-3 [21.0 kB] Get:11 http://ftpmaster.internal/ubuntu mantic/main riscv64 gettext-base riscv64 0.21-12 [38.9 kB] Get:12 http://ftpmaster.internal/ubuntu mantic/main riscv64 libuchardet0 riscv64 0.0.7-1build2 [78.9 kB] Get:13 http://ftpmaster.internal/ubuntu mantic/main riscv64 groff-base riscv64 1.22.4-10 [906 kB] Get:14 http://ftpmaster.internal/ubuntu mantic/main riscv64 libnghttp2-14 riscv64 1.54.0-1 [70.9 kB] Get:15 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpipeline1 riscv64 1.5.7-1 [26.8 kB] Get:16 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpsl5 riscv64 0.21.2-1 [57.9 kB] Get:17 http://ftpmaster.internal/ubuntu mantic/main riscv64 man-db riscv64 2.11.2-2 [1180 kB] Get:18 http://ftpmaster.internal/ubuntu mantic/main riscv64 m4 riscv64 1.4.19-3 [243 kB] Get:19 http://ftpmaster.internal/ubuntu mantic/main riscv64 autoconf all 2.71-3 [339 kB] Get:20 http://ftpmaster.internal/ubuntu mantic/main riscv64 autotools-dev all 20220109.1 [44.9 kB] Get:21 http://ftpmaster.internal/ubuntu mantic/main riscv64 automake all 1:1.16.5-1.3 [558 kB] Get:22 http://ftpmaster.internal/ubuntu mantic/main riscv64 autopoint all 0.21-12 [422 kB] Get:23 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdebhelper-perl all 13.11.4ubuntu3 [66.1 kB] Get:24 http://ftpmaster.internal/ubuntu mantic/main riscv64 libtool all 2.4.7-5 [166 kB] Get:25 http://ftpmaster.internal/ubuntu mantic/main riscv64 dh-autoreconf all 20 [16.1 kB] Get:26 http://ftpmaster.internal/ubuntu mantic/main riscv64 libarchive-zip-perl all 1.68-1 [90.2 kB] Get:27 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsub-override-perl all 0.09-4 [8706 B] Get:28 http://ftpmaster.internal/ubuntu mantic/main riscv64 libfile-stripnondeterminism-perl all 1.13.1-1 [18.1 kB] Get:29 http://ftpmaster.internal/ubuntu mantic/main riscv64 dh-strip-nondeterminism all 1.13.1-1 [5362 B] Get:30 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdw1 riscv64 0.188-2.1 [229 kB] Get:31 http://ftpmaster.internal/ubuntu mantic/main riscv64 debugedit riscv64 1:5.0-5 [48.8 kB] Get:32 http://ftpmaster.internal/ubuntu mantic/main riscv64 dwz riscv64 0.15-1 [115 kB] Get:33 http://ftpmaster.internal/ubuntu mantic/main riscv64 gettext riscv64 0.21-12 [811 kB] Get:34 http://ftpmaster.internal/ubuntu mantic/main riscv64 intltool-debian all 0.35.0+20060710.6 [23.2 kB] Get:35 http://ftpmaster.internal/ubuntu mantic/main riscv64 po-debconf all 1.0.21+nmu1 [233 kB] Get:36 http://ftpmaster.internal/ubuntu mantic/main riscv64 debhelper all 13.11.4ubuntu3 [925 kB] Get:37 http://ftpmaster.internal/ubuntu mantic/main riscv64 libbrotli1 riscv64 1.0.9-2build8 [324 kB] Get:38 http://ftpmaster.internal/ubuntu mantic/main riscv64 libbz2-dev riscv64 1.0.8-5build1 [88.9 kB] Get:39 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsasl2-modules-db riscv64 2.1.28+dfsg1-1 [19.2 kB] Get:40 http://ftpmaster.internal/ubuntu mantic/main riscv64 libsasl2-2 riscv64 2.1.28+dfsg1-1 [54.0 kB] Get:41 http://ftpmaster.internal/ubuntu mantic/main riscv64 libldap2 riscv64 2.6.3+dfsg-1~exp1ubuntu2 [163 kB] Get:42 http://ftpmaster.internal/ubuntu mantic/main riscv64 librtmp1 riscv64 2.4+20151223.gitfa8646d.1-2build4 [54.6 kB] Get:43 http://ftpmaster.internal/ubuntu mantic-proposed/main riscv64 libssh-4 riscv64 0.10.5-2 [163 kB] Get:44 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcurl3-gnutls riscv64 7.88.1-10ubuntu1 [265 kB] Get:45 http://ftpmaster.internal/ubuntu mantic/main riscv64 libcurl4-gnutls-dev riscv64 7.88.1-10ubuntu1 [874 kB] Get:46 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdeflate0 riscv64 1.15-1 [36.8 kB] Get:47 http://ftpmaster.internal/ubuntu mantic/main riscv64 libdeflate-dev riscv64 1.15-1 [83.7 kB] Get:48 http://ftpmaster.internal/ubuntu mantic/universe riscv64 libhtscodecs2 riscv64 1.5.0-1 [80.7 kB] Get:49 http://ftpmaster.internal/ubuntu mantic-proposed/universe riscv64 libhts3 riscv64 1.17+ds-1 [390 kB] Get:50 http://ftpmaster.internal/ubuntu mantic/main riscv64 liblzma-dev riscv64 5.4.1-0.2 [314 kB] Get:51 http://ftpmaster.internal/ubuntu mantic/main riscv64 zlib1g-dev riscv64 1:1.2.13.dfsg-1ubuntu4 [957 kB] Get:52 http://ftpmaster.internal/ubuntu mantic-proposed/universe riscv64 libhts-dev riscv64 1.17+ds-1 [3659 kB] Get:53 http://ftpmaster.internal/ubuntu mantic/main riscv64 libio-pty-perl riscv64 1:1.17-1 [31.8 kB] Get:54 http://ftpmaster.internal/ubuntu mantic/main riscv64 libncurses-dev riscv64 6.4-4 [874 kB] Get:55 http://ftpmaster.internal/ubuntu mantic/main riscv64 libpkgconf3 riscv64 1.8.1-2 [27.8 kB] Get:56 http://ftpmaster.internal/ubuntu mantic/main riscv64 pkgconf-bin riscv64 1.8.1-2 [20.4 kB] Get:57 http://ftpmaster.internal/ubuntu mantic/main riscv64 pkgconf riscv64 1.8.1-2 [16.7 kB] Get:58 http://ftpmaster.internal/ubuntu mantic/main riscv64 pkg-config riscv64 1.8.1-2 [7172 B] Get:59 http://ftpmaster.internal/ubuntu mantic-proposed/universe riscv64 tabix riscv64 1.17+ds-1 [431 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 28.3 MB in 5s (5710 kB/s) Selecting previously unselected package autoconf-archive. (Reading database ... 12511 files and directories currently installed.) Preparing to unpack .../00-autoconf-archive_20220903-3_all.deb ... Unpacking autoconf-archive (20220903-3) ... Selecting previously unselected package libelf1:riscv64. Preparing to unpack .../01-libelf1_0.188-2.1_riscv64.deb ... Unpacking libelf1:riscv64 (0.188-2.1) ... Selecting previously unselected package libicu72:riscv64. Preparing to unpack .../02-libicu72_72.1-3ubuntu2_riscv64.deb ... Unpacking libicu72:riscv64 (72.1-3ubuntu2) ... Selecting previously unselected package libxml2:riscv64. Preparing to unpack .../03-libxml2_2.9.14+dfsg-1.2_riscv64.deb ... Unpacking libxml2:riscv64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package bash-completion. Preparing to unpack .../04-bash-completion_1%3a2.11-6ubuntu1_all.deb ... Unpacking bash-completion (1:2.11-6ubuntu1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../05-bsdextrautils_2.38.1-5ubuntu2_riscv64.deb ... Unpacking bsdextrautils (2.38.1-5ubuntu2) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.44-3_riscv64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:riscv64. Preparing to unpack .../07-libmagic1_1%3a5.44-3_riscv64.deb ... Unpacking libmagic1:riscv64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.44-3_riscv64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-12_riscv64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:riscv64. Preparing to unpack .../10-libuchardet0_0.0.7-1build2_riscv64.deb ... Unpacking libuchardet0:riscv64 (0.0.7-1build2) ... Selecting previously unselected package groff-base. Preparing to unpack .../11-groff-base_1.22.4-10_riscv64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package libnghttp2-14:riscv64. Preparing to unpack .../12-libnghttp2-14_1.54.0-1_riscv64.deb ... Unpacking libnghttp2-14:riscv64 (1.54.0-1) ... Selecting previously unselected package libpipeline1:riscv64. Preparing to unpack .../13-libpipeline1_1.5.7-1_riscv64.deb ... Unpacking libpipeline1:riscv64 (1.5.7-1) ... Selecting previously unselected package libpsl5:riscv64. Preparing to unpack .../14-libpsl5_0.21.2-1_riscv64.deb ... Unpacking libpsl5:riscv64 (0.21.2-1) ... Selecting previously unselected package man-db. Preparing to unpack .../15-man-db_2.11.2-2_riscv64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../16-m4_1.4.19-3_riscv64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../17-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../18-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../19-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../20-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../21-libdebhelper-perl_13.11.4ubuntu3_all.deb ... Unpacking libdebhelper-perl (13.11.4ubuntu3) ... Selecting previously unselected package libtool. Preparing to unpack .../22-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../23-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../24-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../25-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../26-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../27-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libdw1:riscv64. Preparing to unpack .../28-libdw1_0.188-2.1_riscv64.deb ... Unpacking libdw1:riscv64 (0.188-2.1) ... Selecting previously unselected package debugedit. Preparing to unpack .../29-debugedit_1%3a5.0-5_riscv64.deb ... Unpacking debugedit (1:5.0-5) ... Selecting previously unselected package dwz. Preparing to unpack .../30-dwz_0.15-1_riscv64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package gettext. Preparing to unpack .../31-gettext_0.21-12_riscv64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../32-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../33-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../34-debhelper_13.11.4ubuntu3_all.deb ... Unpacking debhelper (13.11.4ubuntu3) ... Selecting previously unselected package libbrotli1:riscv64. Preparing to unpack .../35-libbrotli1_1.0.9-2build8_riscv64.deb ... Unpacking libbrotli1:riscv64 (1.0.9-2build8) ... Selecting previously unselected package libbz2-dev:riscv64. Preparing to unpack .../36-libbz2-dev_1.0.8-5build1_riscv64.deb ... Unpacking libbz2-dev:riscv64 (1.0.8-5build1) ... Selecting previously unselected package libsasl2-modules-db:riscv64. Preparing to unpack .../37-libsasl2-modules-db_2.1.28+dfsg1-1_riscv64.deb ... Unpacking libsasl2-modules-db:riscv64 (2.1.28+dfsg1-1) ... Selecting previously unselected package libsasl2-2:riscv64. Preparing to unpack .../38-libsasl2-2_2.1.28+dfsg1-1_riscv64.deb ... Unpacking libsasl2-2:riscv64 (2.1.28+dfsg1-1) ... Selecting previously unselected package libldap2:riscv64. Preparing to unpack .../39-libldap2_2.6.3+dfsg-1~exp1ubuntu2_riscv64.deb ... Unpacking libldap2:riscv64 (2.6.3+dfsg-1~exp1ubuntu2) ... Selecting previously unselected package librtmp1:riscv64. Preparing to unpack .../40-librtmp1_2.4+20151223.gitfa8646d.1-2build4_riscv64.deb ... Unpacking librtmp1:riscv64 (2.4+20151223.gitfa8646d.1-2build4) ... Selecting previously unselected package libssh-4:riscv64. Preparing to unpack .../41-libssh-4_0.10.5-2_riscv64.deb ... Unpacking libssh-4:riscv64 (0.10.5-2) ... Selecting previously unselected package libcurl3-gnutls:riscv64. Preparing to unpack .../42-libcurl3-gnutls_7.88.1-10ubuntu1_riscv64.deb ... Unpacking libcurl3-gnutls:riscv64 (7.88.1-10ubuntu1) ... Selecting previously unselected package libcurl4-gnutls-dev:riscv64. Preparing to unpack .../43-libcurl4-gnutls-dev_7.88.1-10ubuntu1_riscv64.deb ... Unpacking libcurl4-gnutls-dev:riscv64 (7.88.1-10ubuntu1) ... Selecting previously unselected package libdeflate0:riscv64. Preparing to unpack .../44-libdeflate0_1.15-1_riscv64.deb ... Unpacking libdeflate0:riscv64 (1.15-1) ... Selecting previously unselected package libdeflate-dev:riscv64. Preparing to unpack .../45-libdeflate-dev_1.15-1_riscv64.deb ... Unpacking libdeflate-dev:riscv64 (1.15-1) ... Selecting previously unselected package libhtscodecs2:riscv64. Preparing to unpack .../46-libhtscodecs2_1.5.0-1_riscv64.deb ... Unpacking libhtscodecs2:riscv64 (1.5.0-1) ... Selecting previously unselected package libhts3:riscv64. Preparing to unpack .../47-libhts3_1.17+ds-1_riscv64.deb ... Unpacking libhts3:riscv64 (1.17+ds-1) ... Selecting previously unselected package liblzma-dev:riscv64. Preparing to unpack .../48-liblzma-dev_5.4.1-0.2_riscv64.deb ... Unpacking liblzma-dev:riscv64 (5.4.1-0.2) ... Selecting previously unselected package zlib1g-dev:riscv64. Preparing to unpack .../49-zlib1g-dev_1%3a1.2.13.dfsg-1ubuntu4_riscv64.deb ... Unpacking zlib1g-dev:riscv64 (1:1.2.13.dfsg-1ubuntu4) ... Selecting previously unselected package libhts-dev:riscv64. Preparing to unpack .../50-libhts-dev_1.17+ds-1_riscv64.deb ... Unpacking libhts-dev:riscv64 (1.17+ds-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../51-libio-pty-perl_1%3a1.17-1_riscv64.deb ... Unpacking libio-pty-perl (1:1.17-1) ... Selecting previously unselected package libncurses-dev:riscv64. Preparing to unpack .../52-libncurses-dev_6.4-4_riscv64.deb ... Unpacking libncurses-dev:riscv64 (6.4-4) ... Selecting previously unselected package libpkgconf3:riscv64. Preparing to unpack .../53-libpkgconf3_1.8.1-2_riscv64.deb ... Unpacking libpkgconf3:riscv64 (1.8.1-2) ... Selecting previously unselected package pkgconf-bin. Preparing to unpack .../54-pkgconf-bin_1.8.1-2_riscv64.deb ... Unpacking pkgconf-bin (1.8.1-2) ... Selecting previously unselected package pkgconf:riscv64. Preparing to unpack .../55-pkgconf_1.8.1-2_riscv64.deb ... Unpacking pkgconf:riscv64 (1.8.1-2) ... Selecting previously unselected package pkg-config:riscv64. Preparing to unpack .../56-pkg-config_1.8.1-2_riscv64.deb ... Unpacking pkg-config:riscv64 (1.8.1-2) ... Selecting previously unselected package tabix. Preparing to unpack .../57-tabix_1.17+ds-1_riscv64.deb ... Unpacking tabix (1.17+ds-1) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../58-sbuild-build-depends-main-dummy_0.invalid.0_riscv64.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Setting up libhtscodecs2:riscv64 (1.5.0-1) ... Setting up libpipeline1:riscv64 (1.5.7-1) ... Setting up libncurses-dev:riscv64 (6.4-4) ... Setting up libpsl5:riscv64 (0.21.2-1) ... Setting up libicu72:riscv64 (72.1-3ubuntu2) ... Setting up bsdextrautils (2.38.1-5ubuntu2) ... Setting up libio-pty-perl (1:1.17-1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4ubuntu3) ... Setting up libbrotli1:riscv64 (1.0.9-2build8) ... Setting up libnghttp2-14:riscv64 (1.54.0-1) ... Setting up libmagic1:riscv64 (1:5.44-3) ... Setting up libdeflate0:riscv64 (1.15-1) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up autoconf-archive (20220903-3) ... Setting up file (1:5.44-3) ... Setting up libsasl2-modules-db:riscv64 (2.1.28+dfsg1-1) ... Setting up autotools-dev (20220109.1) ... Setting up libpkgconf3:riscv64 (1.8.1-2) ... Setting up librtmp1:riscv64 (2.4+20151223.gitfa8646d.1-2build4) ... Setting up bash-completion (1:2.11-6ubuntu1) ... Setting up autopoint (0.21-12) ... Setting up pkgconf-bin (1.8.1-2) ... Setting up libsasl2-2:riscv64 (2.1.28+dfsg1-1) ... Setting up libssh-4:riscv64 (0.10.5-2) ... Setting up autoconf (2.71-3) ... Setting up liblzma-dev:riscv64 (5.4.1-0.2) ... Setting up zlib1g-dev:riscv64 (1:1.2.13.dfsg-1ubuntu4) ... Setting up libuchardet0:riscv64 (0.0.7-1build2) ... Setting up libsub-override-perl (0.09-4) ... Setting up libdeflate-dev:riscv64 (1.15-1) ... Setting up tabix (1.17+ds-1) ... Setting up libelf1:riscv64 (0.188-2.1) ... Setting up libxml2:riscv64 (2.9.14+dfsg-1.2) ... Setting up libldap2:riscv64 (2.6.3+dfsg-1~exp1ubuntu2) ... Setting up libbz2-dev:riscv64 (1.0.8-5build1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libdw1:riscv64 (0.188-2.1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libcurl3-gnutls:riscv64 (7.88.1-10ubuntu1) ... Setting up libcurl4-gnutls-dev:riscv64 (7.88.1-10ubuntu1) ... Setting up pkgconf:riscv64 (1.8.1-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up pkg-config:riscv64 (1.8.1-2) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up debugedit (1:5.0-5) ... Setting up libhts3:riscv64 (1.17+ds-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhts-dev:riscv64 (1.17+ds-1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up debhelper (13.11.4ubuntu3) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.37-0ubuntu2) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.13.0-1019-generic #21~20.04.1-Ubuntu SMP Thu Mar 24 22:36:01 UTC 2022 riscv64 (riscv64) Toolchain package versions: binutils_2.40.50.20230622-1ubuntu1 dpkg-dev_1.21.22ubuntu1 g++-12_12.3.0-3ubuntu1 gcc-12_12.3.0-3ubuntu1 libc6-dev_2.37-0ubuntu2 libstdc++-12-dev_12.3.0-3ubuntu1 libstdc++6_13.1.0-6ubuntu1 linux-libc-dev_6.3.0-7.7 Package versions: adduser_3.134ubuntu1 advancecomp_2.5-1 apt_2.7.1 autoconf_2.71-3 autoconf-archive_20220903-3 automake_1:1.16.5-1.3 autopoint_0.21-12 autotools-dev_20220109.1 base-files_13ubuntu1 base-passwd_3.6.1 bash_5.2.15-2ubuntu1 bash-completion_1:2.11-6ubuntu1 binutils_2.40.50.20230622-1ubuntu1 binutils-common_2.40.50.20230622-1ubuntu1 binutils-riscv64-linux-gnu_2.40.50.20230622-1ubuntu1 bsdextrautils_2.38.1-5ubuntu2 bsdutils_1:2.38.1-5ubuntu2 build-essential_12.9ubuntu3 bzip2_1.0.8-5build1 ca-certificates_20230311ubuntu1 coreutils_9.1-1ubuntu2 cpp_4:12.2.0-3ubuntu1 cpp-12_12.3.0-3ubuntu1 dash_0.5.12-2ubuntu1 debconf_1.5.82 debhelper_13.11.4ubuntu3 debianutils_5.7-0.4 debugedit_1:5.0-5 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.22ubuntu1 dpkg-dev_1.21.22ubuntu1 dwz_0.15-1 e2fsprogs_1.47.0-1ubuntu1 fakeroot_1.31-1.2 file_1:5.44-3 findutils_4.9.0-4ubuntu1 g++_4:12.2.0-3ubuntu1 g++-12_12.3.0-3ubuntu1 gcc_4:12.2.0-3ubuntu1 gcc-12_12.3.0-3ubuntu1 gcc-12-base_12.3.0-3ubuntu1 gcc-13-base_13.1.0-6ubuntu1 gettext_0.21-12 gettext-base_0.21-12 gpg_2.2.40-1.1ubuntu1 gpg-agent_2.2.40-1.1ubuntu1 gpgconf_2.2.40-1.1ubuntu1 gpgv_2.2.40-1.1ubuntu1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1ubuntu1 hostname_3.23+nmu1ubuntu1 init_1.65.2 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapparmor1_3.0.8-1ubuntu3 libapt-pkg6.0_2.7.1 libarchive-zip-perl_1.68-1 libargon2-1_0~20190702+dfsg-3 libasan8_13.1.0-6ubuntu1 libassuan0_2.5.5-5 libatomic1_13.1.0-6ubuntu1 libattr1_1:2.5.1-4 libaudit-common_1:3.0.9-1 libaudit1_1:3.0.9-1 libbinutils_2.40.50.20230622-1ubuntu1 libblkid1_2.38.1-5ubuntu2 libbrotli1_1.0.9-2build8 libbz2-1.0_1.0.8-5build1 libbz2-dev_1.0.8-5build1 libc-bin_2.37-0ubuntu2 libc-dev-bin_2.37-0ubuntu2 libc6_2.37-0ubuntu2 libc6-dev_2.37-0ubuntu2 libcap-ng0_0.8.3-1build2 libcap2_1:2.66-4ubuntu1 libcc1-0_13.1.0-6ubuntu1 libcom-err2_1.47.0-1ubuntu1 libcrypt-dev_1:4.4.35-1 libcrypt1_1:4.4.35-1 libcryptsetup12_2:2.6.1-4ubuntu1 libctf-nobfd0_2.40.50.20230622-1ubuntu1 libctf0_2.40.50.20230622-1ubuntu1 libcurl3-gnutls_7.88.1-10ubuntu1 libcurl4-gnutls-dev_7.88.1-10ubuntu1 libdb5.3_5.3.28+dfsg2-1 libdebconfclient0_0.267ubuntu1 libdebhelper-perl_13.11.4ubuntu3 libdeflate-dev_1.15-1 libdeflate0_1.15-1 libdevmapper1.02.1_2:1.02.185-2ubuntu1 libdpkg-perl_1.21.22ubuntu1 libdw1_0.188-2.1 libelf1_0.188-2.1 libext2fs2_1.47.0-1ubuntu1 libfakeroot_1.31-1.2 libfdisk1_2.38.1-5ubuntu2 libffi8_3.4.4-1 libfile-stripnondeterminism-perl_1.13.1-1 libgcc-12-dev_12.3.0-3ubuntu1 libgcc-s1_13.1.0-6ubuntu1 libgcrypt20_1.10.1-3ubuntu1 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1ubuntu1 libgnutls30_3.7.9-2ubuntu1 libgomp1_13.1.0-6ubuntu1 libgpg-error0_1.46-1 libgssapi-krb5-2_1.20.1-2 libhogweed6_3.8.1-2 libhts-dev_1.17+ds-1 libhts3_1.17+ds-1 libhtscodecs2_1.5.0-1 libicu72_72.1-3ubuntu2 libidn2-0_2.3.3-1build1 libio-pty-perl_1:1.17-1 libip4tc2_1.8.7-1ubuntu7 libisl23_0.26-3 libjansson4_2.14-2 libjson-c5_0.16-2 libk5crypto3_1.20.1-2 libkeyutils1_1.6.3-2 libkmod2_30+20221128-1ubuntu1 libkrb5-3_1.20.1-2 libkrb5support0_1.20.1-2 libldap2_2.6.3+dfsg-1~exp1ubuntu2 liblockfile-bin_1.17-1build2 liblockfile1_1.17-1build2 liblz4-1_1.9.4-1 liblzma-dev_5.4.1-0.2 liblzma5_5.4.1-0.2 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.1.0-1 libmount1_2.38.1-5ubuntu2 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libncurses-dev_6.4-4 libncurses6_6.4-4 libncursesw6_6.4-4 libnettle8_3.8.1-2 libnghttp2-14_1.54.0-1 libnpth0_1.6-3build2 libnsl-dev_1.3.0-2build2 libnsl2_1.3.0-2build2 libp11-kit0_0.24.1-2ubuntu1 libpam-modules_1.5.2-6ubuntu1 libpam-modules-bin_1.5.2-6ubuntu1 libpam-runtime_1.5.2-6ubuntu1 libpam0g_1.5.2-6ubuntu1 libpcre2-8-0_10.42-1 libperl5.36_5.36.0-7ubuntu1 libpipeline1_1.5.7-1 libpkgconf3_1.8.1-2 libpng16-16_1.6.39-2 libproc2-0_2:4.0.3-1ubuntu1 libprocps8_2:3.3.17-7ubuntu1 libpsl5_0.21.2-1 libreadline8_8.2-1.3 librtmp1_2.4+20151223.gitfa8646d.1-2build4 libsasl2-2_2.1.28+dfsg1-1 libsasl2-modules-db_2.1.28+dfsg1-1 libseccomp2_2.5.4-1ubuntu3 libselinux1_3.4-1build4 libsemanage-common_3.4-1build4 libsemanage2_3.4-1build4 libsepol2_3.4-2.1 libsmartcols1_2.38.1-5ubuntu2 libsqlite3-0_3.40.1-2 libss2_1.47.0-1ubuntu1 libssh-4_0.10.5-2 libssl3_3.0.9-1ubuntu1 libstdc++-12-dev_12.3.0-3ubuntu1 libstdc++6_13.1.0-6ubuntu1 libsub-override-perl_0.09-4 libsystemd-shared_252.5-2ubuntu3 libsystemd0_252.5-2ubuntu3 libtasn1-6_4.19.0-2 libtinfo6_6.4-4 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libuchardet0_0.0.7-1build2 libudev1_252.5-2ubuntu3 libunistring2_1.0-2 libuuid1_2.38.1-5ubuntu2 libxml2_2.9.14+dfsg-1.2 libxxhash0_0.8.1-1 libzstd1_1.5.4+dfsg2-5 linux-libc-dev_6.3.0-7.7 lockfile-progs_0.1.19build1 login_1:4.13+dfsg1-1ubuntu1 logsave_1.47.0-1ubuntu1 lsb-base_11.6 lto-disabled-list_41 m4_1.4.19-3 make_4.3-4.1build1 man-db_2.11.2-2 mawk_1.3.4.20230525-1 mount_2.38.1-5ubuntu2 ncurses-base_6.4-4 ncurses-bin_6.4-4 openssl_3.0.9-1ubuntu1 optipng_0.7.7-2build1 passwd_1:4.13+dfsg1-1ubuntu1 patch_2.7.6-7build2 perl_5.36.0-7ubuntu1 perl-base_5.36.0-7ubuntu1 perl-modules-5.36_5.36.0-7ubuntu1 pinentry-curses_1.2.1-1ubuntu1 pkg-config_1.8.1-2 pkgbinarymangler_153 pkgconf_1.8.1-2 pkgconf-bin_1.8.1-2 po-debconf_1.0.21+nmu1 policyrcd-script-zg2_0.1-3.1 procps_2:4.0.3-1ubuntu1 readline-common_8.2-1.3 rpcsvc-proto_1.4.2-0ubuntu6 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 systemd_252.5-2ubuntu3 systemd-sysv_252.5-2ubuntu3 sysvinit-utils_3.06-4ubuntu1 tabix_1.17+ds-1 tar_1.34+dfsg-1.2ubuntu1 tzdata_2023c-4exp1ubuntu1 ubuntu-keyring_2021.03.26 usrmerge_35ubuntu1 util-linux_2.38.1-5ubuntu2 util-linux-extra_2.38.1-5ubuntu2 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-1ubuntu4 zlib1g-dev_1:1.2.13.dfsg-1ubuntu4 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: samtools Binary: samtools, samtools-test Architecture: any all Version: 1.17-1 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille , Étienne Mollier Homepage: https://www.htslib.org/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/samtools Vcs-Git: https://salsa.debian.org/med-team/samtools.git Testsuite: autopkgtest Testsuite-Triggers: tabix Build-Depends: debhelper-compat (= 13), bash-completion, libio-pty-perl , libncurses-dev, libhts-dev (>= 1.17~), zlib1g-dev, automake, autoconf-archive, pkg-config, tabix, liblzma-dev, libbz2-dev Package-List: samtools deb science optional arch=any samtools-test deb science optional arch=all Checksums-Sha1: d1268bc344dfa232f8da9ff7b6f0daf7e25d4135 5459752 samtools_1.17.orig.tar.gz 9acd81361fad894450e6943c5d4faf2b334e09d5 22852 samtools_1.17-1.debian.tar.xz Checksums-Sha256: f76ec1880468ecaa5341a7256ae896f2cfb191193dbb683046776fb81e18af49 5459752 samtools_1.17.orig.tar.gz f4101dea7163f452f86363831eb43ae3a6921e54847e99081301106fd392d136 22852 samtools_1.17-1.debian.tar.xz Files: 1da0897ae626b75769e31efa9b8bf7a0 5459752 samtools_1.17.orig.tar.gz 071e15168e5850892703c53ccf502d53 22852 samtools_1.17-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmSUs24UHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdqCwxAAoya/uuqWmg9RqZLjywB3j9N384a0 UyulDt3+uKzixKf42gVQYt/DnqqpXoocCuHqjYqhrJbWQ712VhZOw2Blz5bqkL0r fbbRYg45hvm6zqSgzAzO8bYizIatkA8Fo5LNn9pLqAtZmcFHbsZlZCKdpcWSWKW+ NqF8tlRy9Rl6sOEncCOAfz7jrYvGeZgTCkwGb97EV2qNFqan0ZSwhT1hzaF2YKjW EGl3QSckPg+eJSApfLd+F43Eq1M9mwk9E5vVFMTyNlED5XVNI/lL3slRVYUhxuMl Zuxd1hbEH7aYFnnnhUH1zoDYQiFEkS9edTH+TK4Hhkm6ini0hOxmZXZNbbXwy9TW AWRKJRswSzoIkLQTippbjIloku7wV/pEf9aCQg6qgqPafjAsEMPn1oAHpB1hTLiU omZ8fZwwfD2+lhdwUG0iHP0hnJ/UerhqJd6YXD7wIhq9ION9UtHvVOrQ+F0O7ajM UBIbnaSHnhEODdvLe7qarEV9OnAHW2jJymje/7tz/RHofJydqJH4h5BWsxgITDLU lvfCSngLd6U/t+zxoiFFh9CIGwxxS0skk/CszQeVv7hx61Hbwo+k4M3JZzvz1VNE Q1a8lx0VOjhLwK1T58TQ45xwo6B+kyekb6r33Hbx/tZJy5eLO/pK3SzWbNKg0+XZ 4ORUGHuZYEIwwls= =bnPv -----END PGP SIGNATURE----- gpgv: Signature made Thu Jun 22 20:47:42 2023 UTC gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./samtools_1.17-1.dsc: no acceptable signature found dpkg-source: info: extracting samtools in /<> dpkg-source: info: unpacking samtools_1.17.orig.tar.gz dpkg-source: info: unpacking samtools_1.17-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying reproducible.patch dpkg-source: info: applying samtools-fasta-q-whatis.patch dpkg-source: info: applying typos.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-26332610 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-26332610 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-26332610 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: info: source package samtools dpkg-buildpackage: info: source version 1.17-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 dpkg-source: info: using options from samtools-1.17/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis.*|README.md)$ debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' rm -f config.mk touch config.mk dh_auto_clean -- make -j8 distclean make[2]: Entering directory '/<>' rm -f test/*.new test/*.tmp test/*/*.new test/*/*.tmp test/*/*.tmp.* cd test/dat && rm -f test_input_*.bam.bai view.*.bam.bai cd test/mpileup && rm -f FAIL-*.out* PASS-*.out* anomalous.[bc]*am indels.[bc]*am mpileup.*.[cs]*am mpileup.*.crai overlap50.[bc]*am expected/1.out xx#depth*.bam* cd test/reference && rm -f mpileup.*.fai rm -f *.o misc/*.o test/*.o test/*/*.o version.h ./lz4/lz4.o rm -f samtools libst.a misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim test/merge/test_bam_translate test/merge/test_rtrans_build test/merge/test_trans_tbl_init test/split/test_count_rg test/split/test_expand_format_string test/split/test_filter_header_rg test/split/test_parse_args test/vcf-miniview rm -f config.cache config.h config.log config.mk config.status rm -f TAGS rm -rf autom4te.cache make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/samtools.substvars debian/samtools-test.substvars debian/files rm -fr -- debian/samtools/ debian/tmp/ debian/samtools-test/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i configure.ac:64: warning: _AC_CONFIG_SUBDIRS: you should use literals ./lib/autoconf/status.m4:1096: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:64: the top level find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' touch config.mk aclocal --force -I debian/ -I /usr/share/aclocal autoconf configure.ac:64: warning: _AC_CONFIG_SUBDIRS: you should use literals ./lib/autoconf/status.m4:1096: AC_CONFIG_SUBDIRS is expanded from... m4/ax_with_htslib.m4:55: AX_WITH_HTSLIB is expanded from... configure.ac:64: the top level dh_auto_configure -- --with-htslib=system ./configure --build=riscv64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/riscv64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --with-htslib=system checking for gawk... no checking for mawk... mawk checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking for grep that handles long lines and -e... /usr/bin/grep checking for C compiler warning flags... -Wall checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for htslib/sam.h... yes checking for hts_version in -lhts... yes checking for Curses library... yes checking for working curses.h... yes checking for X/Open Enhanced Curses conformance... no checking for Curses color functions... yes checking for obsolete Curses functions... yes checking for library containing cbreak... none required checking for zlib.h... yes checking for inflate in -lz... yes checking for library containing regcomp... none required configure: creating ./config.status config.status: creating config.mk config.status: creating config.h make[1]: Leaving directory '/<>' rm -f debian/samtools.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- \ CFLAGS="$(dpkg-buildflags --get CFLAGS)" \ CPPFLAGS="\$(DFLAGS) \$(INCLUDES) $(dpkg-buildflags --get CPPFLAGS)" \ LDFLAGS="$(dpkg-buildflags --get LDFLAGS)" make -j8 "CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1" "CPPFLAGS=\$(DFLAGS) \$(INCLUDES) -Wdate-time -D_FORTIFY_SOURCE=2" "LDFLAGS=-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/<>' gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_aux.o bam_aux.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_index.o bam_index.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_plcmd.o bam_plcmd.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_view.o sam_view.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_fastq.o bam_fastq.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_cat.o bam_cat.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_md.o bam_md.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_plbuf.o bam_plbuf.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_reheader.o bam_reheader.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_sort.o bam_sort.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_rmdup.o bam_rmdup.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_rmdupse.o bam_rmdupse.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_mate.o bam_mate.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_stat.o bam_stat.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_color.o bam_color.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C echo '#define SAMTOOLS_VERSION "1.17"' > version.h echo '#define SAMTOOLS_CC "gcc"' >> version.h echo '#define SAMTOOLS_CPPFLAGS "-frelease -Wdate-time -D_FORTIFY_SOURCE=2"' >> version.h echo '#define SAMTOOLS_CFLAGS "-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1"' >> version.h echo '#define SAMTOOLS_LDFLAGS "-Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now"' >> version.h echo '#define SAMTOOLS_HTSDIR ""' >> version.h echo '#define SAMTOOLS_LIBS ""' >> version.h echo '#define SAMTOOLS_CURSES_LIB "-lcurses"' >> version.h sed -i -e 's@/<>@«BUILDPATH»@g' version.h gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2bcf.o bam2bcf.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample.o sample.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cut_target.o cut_target.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o phase.o phase.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam2depth.o bam2depth.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o coverage.o coverage.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o padding.o padding.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bedcov.o bedcov.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bamshuf.o bamshuf.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o faidx.o faidx.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o dict.o dict.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stats.o stats.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o stats_isize.o stats_isize.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_flags.o bam_flags.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_split.o bam_split.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview.o bam_tview.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview_curses.o bam_tview_curses.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_tview_html.o bam_tview_html.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_lpileup.o bam_lpileup.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_quickcheck.o bam_quickcheck.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_addrprg.o bam_addrprg.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_markdup.o bam_markdup.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tmp_file.o tmp_file.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_ampliconclip.o bam_ampliconclip.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o amplicon_stats.o amplicon_stats.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_import.o bam_import.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_samples.o bam_samples.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam_consensus.o bam_consensus.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o consensus_pileup.o consensus_pileup.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o reference.o reference.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o reset.o reset.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cram_size.o cram_size.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o lz4/lz4.o lz4/lz4.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_opts.o sam_opts.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sam_utils.o sam_utils.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bedidx.o bedidx.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bam.o bam.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/ace2sam.o misc/ace2sam.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -DMAQ_LONGREADS -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/maq2sam-long.o misc/maq2sam.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/maq2sam-short.o misc/maq2sam.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/md5fa.o misc/md5fa.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/md5sum-lite.o misc/md5sum-lite.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o misc/wgsim.o misc/wgsim.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_bam_translate.o test/merge/test_bam_translate.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/test.o test/test.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_rtrans_build.o test/merge/test_rtrans_build.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/merge/test_trans_tbl_init.o test/merge/test_trans_tbl_init.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_count_rg.o test/split/test_count_rg.c gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_expand_format_string.o test/split/test_expand_format_string.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_filter_header_rg.o test/split/test_filter_header_rg.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/split/test_parse_args.o test/split/test_parse_args.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o test/vcf-miniview.o test/vcf-miniview.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fdebug-prefix-map=/<>=/usr/src/samtools-1.17-1 -I. -I./lz4 -frelease -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bamtk.o bamtk.c cc1: warning: command-line option ‘-frelease’ is valid for D but not for C ar -rcs libst.a sam_opts.o sam_utils.o bedidx.o bam.o gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o misc/ace2sam misc/ace2sam.o -lhts -lz gcc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o misc/maq2sam-long misc/maq2sam-long.o -lz gcc -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o misc/maq2sam-short misc/maq2sam-short.o -lz gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o misc/md5fa misc/md5fa.o -lhts -lz gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o misc/md5sum-lite misc/md5sum-lite.o -lhts -lz gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o misc/wgsim misc/wgsim.o -lm -lhts -lz gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/split/test_count_rg test/split/test_count_rg.o test/test.o libst.a -lhts -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/split/test_expand_format_string test/split/test_expand_format_string.o test/test.o libst.a -lhts -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/split/test_filter_header_rg test/split/test_filter_header_rg.o test/test.o libst.a -lhts -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/vcf-miniview test/vcf-miniview.o -lhts -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/split/test_parse_args test/split/test_parse_args.o test/test.o libst.a -lhts -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o samtools bam_aux.o bam_index.o bam_plcmd.o sam_view.o bam_fastq.o bam_cat.o bam_md.o bam_plbuf.o bam_reheader.o bam_sort.o bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o bamtk.o bam2bcf.o sample.o cut_target.o phase.o bam2depth.o coverage.o padding.o bedcov.o bamshuf.o faidx.o dict.o stats.o stats_isize.o bam_flags.o bam_split.o bam_tview.o bam_tview_curses.o bam_tview_html.o bam_lpileup.o bam_quickcheck.o bam_addrprg.o bam_markdup.o tmp_file.o bam_ampliconclip.o amplicon_stats.o bam_import.o bam_samples.o bam_consensus.o consensus_pileup.o reference.o reset.o cram_size.o ./lz4/lz4.o libst.a -lhts -lcurses -lm -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/merge/test_trans_tbl_init test/merge/test_trans_tbl_init.o test/test.o libst.a -lhts -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/merge/test_rtrans_build test/merge/test_rtrans_build.o test/test.o libst.a -lhts -lz -lpthread gcc -L./lz4 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o test/merge/test_bam_translate test/merge/test_bam_translate.o test/test.o libst.a -lhts -lz -lpthread make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/samtools.substvars rm -fr -- debian/.debhelper/generated/samtools/ debian/samtools/ debian/tmp/ rm -f debian/samtools.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- \ prefix=/usr install -m0755 -d /<>/debian/tmp make -j8 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no prefix=/usr make[2]: Entering directory '/<>' mkdir -p -m 755 /<>/debian/tmp/usr/bin /<>/debian/tmp/usr/bin /<>/debian/tmp/usr/share/man/man1 install -p samtools /<>/debian/tmp/usr/bin install -p misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim /<>/debian/tmp/usr/bin install -p misc/blast2sam.pl misc/bowtie2sam.pl misc/export2sam.pl misc/fasta-sanitize.pl misc/interpolate_sam.pl misc/novo2sam.pl misc/plot-ampliconstats misc/plot-bamstats misc/psl2sam.pl misc/sam2vcf.pl misc/samtools.pl misc/seq_cache_populate.pl misc/soap2sam.pl misc/wgsim_eval.pl misc/zoom2sam.pl /<>/debian/tmp/usr/bin install -p -m 644 doc/samtools*.1 misc/wgsim.1 /<>/debian/tmp/usr/share/man/man1 make[2]: Leaving directory '/<>' make clean make[2]: Entering directory '/<>' rm -f test/*.new test/*.tmp test/*/*.new test/*/*.tmp test/*/*.tmp.* cd test/dat && rm -f test_input_*.bam.bai view.*.bam.bai cd test/mpileup && rm -f FAIL-*.out* PASS-*.out* anomalous.[bc]*am indels.[bc]*am mpileup.*.[cs]*am mpileup.*.crai overlap50.[bc]*am expected/1.out xx#depth*.bam* cd test/reference && rm -f mpileup.*.fai rm -f *.o misc/*.o test/*.o test/*/*.o version.h ./lz4/lz4.o rm -f samtools libst.a misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim test/merge/test_bam_translate test/merge/test_rtrans_build test/merge/test_trans_tbl_init test/split/test_count_rg test/split/test_expand_format_string test/split/test_filter_header_rg test/split/test_parse_args test/vcf-miniview make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' rm -f debian/samtools.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install install -m0755 -d debian/samtools//usr cp --reflink=auto -a debian/tmp/usr/bin debian/samtools//usr/ install -m0755 -d debian/samtools//usr/share/man cp --reflink=auto -a debian/tmp/usr/share/man/man1 debian/samtools//usr/share/man/ install -m0755 -d debian/samtools/usr/share/commonwl/ cp --reflink=auto -a ./debian/samtools-faidx.cwl ./debian/samtools-index.cwl ./debian/samtools-rmdup.cwl ./debian/samtools-sort.cwl ./debian/samtools-view.cwl debian/samtools/usr/share/commonwl// install -m0755 -d debian/samtools/usr/share/man/man1 cp --reflink=auto -a ./debian/mans/ace2sam.1 ./debian/mans/samtools.pl.1 ./debian/mans/wgsim.1 debian/samtools/usr/share/man/man1/ # Fix Perl interpreter PATH for pscript in `grep -Rl '#!/usr/bin/env \+perl' debian/*` ; do \ sed -i '1s?#!/usr/bin/env \+perl?#!/usr/bin/perl?' ${pscript} ; \ done # Disable the executable bit on a dataset. if [ -d debian/samtools-test ] \ ; then chmod 0644 debian/samtools-test/usr/share/samtools/test/ampliconclip/ac_test.bed \ ; fi make[1]: Leaving directory '/<>' dh_installdocs -a install -m0755 -d debian/samtools/usr/share/doc/samtools install -m0755 -d debian/samtools/usr/share/doc/samtools cp --reflink=auto -a ./AUTHORS debian/samtools/usr/share/doc/samtools cp --reflink=auto -a ./README debian/samtools/usr/share/doc/samtools chmod -R u\+rw,go=rX debian/samtools/usr/share/doc install -p -m0644 debian/README.Debian debian/samtools/usr/share/doc/samtools/README.Debian install -p -m0644 debian/copyright debian/samtools/usr/share/doc/samtools/copyright rm -f debian/samtools.debhelper.log debian/rules override_dh_installchangelogs make[1]: Entering directory '/<>' dh_installchangelogs NEWS install -m0755 -d debian/samtools/usr/share/doc/samtools install -p -m0644 debian/.debhelper/generated/samtools/dh_installchangelogs.dch.trimmed debian/samtools/usr/share/doc/samtools/changelog.Debian install -p -m0644 debian/NEWS debian/samtools/usr/share/doc/samtools/NEWS.Debian install -p -m0644 NEWS debian/samtools/usr/share/doc/samtools/changelog make[1]: Leaving directory '/<>' dh_installexamples -a install -m0755 -d debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/00README.txt debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/ex1.fa debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/ex1.sam.gz debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/toy.fa debian/samtools/usr/share/doc/samtools/examples cp --reflink=auto -a ./examples/toy.sam debian/samtools/usr/share/doc/samtools/examples rm -f debian/samtools.debhelper.log debian/rules execute_before_dh_installman make[1]: Entering directory '/<>' # Fix whatis entries for subcommands; "samtools subcommand \- desc." # will confuse the lexer, but "samtools-subcommand \- desc." will work. sed -i '/^\.SH NAME/{n;s/^\([^ ]\+\) \([^ ]\+\) \\- /\1-\2 \\- /}' \ debian/*/usr/share/man/man*/*.* # .EX expects a indentation width. sed -i 's/^.EX$/.EX 8/' debian/*/usr/share/man/man*/*.* make[1]: Leaving directory '/<>' dh_installman -a rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 ln -s samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fastq.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/ace2sam.1 debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 debian/samtools/usr/share/man/man1/samtools-ampliconclip.1 debian/samtools/usr/share/man/man1/samtools-ampliconstats.1 debian/samtools/usr/share/man/man1/samtools-bedcov.1 debian/samtools/usr/share/man/man1/samtools-calmd.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/samtools-flagstat.1 debian/samtools/usr/share/man/man1/samtools-fqidx.1 debian/samtools/usr/share/man/man1/samtools-head.1 debian/samtools/usr/share/man/man1/samtools-idxstats.1 debian/samtools/usr/share/man/man1/samtools-import.1 debian/samtools/usr/share/man/man1/samtools-index.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/samtools-cat.1 debian/samtools/usr/share/man/man1/samtools-collate.1 debian/samtools/usr/share/man/man1/samtools-consensus.1 debian/samtools/usr/share/man/man1/samtools-coverage.1 debian/samtools/usr/share/man/man1/samtools-cram-size.1 debian/samtools/usr/share/man/man1/samtools-depad.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/samtools-depth.1 debian/samtools/usr/share/man/man1/samtools-dict.1 debian/samtools/usr/share/man/man1/samtools-faidx.1 debian/samtools/usr/share/man/man1/samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fixmate.1 debian/samtools/usr/share/man/man1/samtools-flags.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/samtools-markdup.1 debian/samtools/usr/share/man/man1/samtools-merge.1 debian/samtools/usr/share/man/man1/samtools-mpileup.1 debian/samtools/usr/share/man/man1/samtools-phase.1 debian/samtools/usr/share/man/man1/samtools-quickcheck.1 debian/samtools/usr/share/man/man1/samtools-reference.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/samtools-reheader.1 debian/samtools/usr/share/man/man1/samtools-reset.1 debian/samtools/usr/share/man/man1/samtools-rmdup.1 debian/samtools/usr/share/man/man1/samtools-samples.1 debian/samtools/usr/share/man/man1/samtools-sort.1 debian/samtools/usr/share/man/man1/samtools-split.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/samtools-stats.1 debian/samtools/usr/share/man/man1/samtools-targetcut.1 debian/samtools/usr/share/man/man1/samtools-tview.1 debian/samtools/usr/share/man/man1/samtools-view.1 debian/samtools/usr/share/man/man1/samtools.1 debian/samtools/usr/share/man/man1/samtools.pl.1 man-recode --to-code UTF-8 --suffix .dh-new debian/samtools/usr/share/man/man1/wgsim.1 mv debian/samtools/usr/share/man/man1/wgsim.1.dh-new debian/samtools/usr/share/man/man1/wgsim.1 chmod 0644 -- debian/samtools/usr/share/man/man1/wgsim.1 mv debian/samtools/usr/share/man/man1/samtools-flagstat.1.dh-new debian/samtools/usr/share/man/man1/samtools-flagstat.1 mv debian/samtools/usr/share/man/man1/samtools-fqidx.1.dh-new debian/samtools/usr/share/man/man1/samtools-fqidx.1 mv debian/samtools/usr/share/man/man1/samtools-head.1.dh-new debian/samtools/usr/share/man/man1/samtools-head.1 mv debian/samtools/usr/share/man/man1/samtools-idxstats.1.dh-new debian/samtools/usr/share/man/man1/samtools-idxstats.1 mv debian/samtools/usr/share/man/man1/samtools-import.1.dh-new debian/samtools/usr/share/man/man1/samtools-import.1 mv debian/samtools/usr/share/man/man1/samtools-index.1.dh-new debian/samtools/usr/share/man/man1/samtools-index.1 chmod 0644 -- debian/samtools/usr/share/man/man1/samtools-flagstat.1 debian/samtools/usr/share/man/man1/samtools-fqidx.1 debian/samtools/usr/share/man/man1/samtools-head.1 debian/samtools/usr/share/man/man1/samtools-idxstats.1 debian/samtools/usr/share/man/man1/samtools-import.1 debian/samtools/usr/share/man/man1/samtools-index.1 mv debian/samtools/usr/share/man/man1/samtools-markdup.1.dh-new debian/samtools/usr/share/man/man1/samtools-markdup.1 mv debian/samtools/usr/share/man/man1/samtools-merge.1.dh-new debian/samtools/usr/share/man/man1/samtools-merge.1 mv debian/samtools/usr/share/man/man1/samtools-mpileup.1.dh-new debian/samtools/usr/share/man/man1/samtools-mpileup.1 mv debian/samtools/usr/share/man/man1/samtools-phase.1.dh-new debian/samtools/usr/share/man/man1/samtools-phase.1 mv debian/samtools/usr/share/man/man1/samtools-quickcheck.1.dh-new debian/samtools/usr/share/man/man1/samtools-quickcheck.1 mv debian/samtools/usr/share/man/man1/samtools-reference.1.dh-new debian/samtools/usr/share/man/man1/samtools-reference.1 chmod 0644 -- debian/samtools/usr/share/man/man1/samtools-markdup.1 debian/samtools/usr/share/man/man1/samtools-merge.1 debian/samtools/usr/share/man/man1/samtools-mpileup.1 debian/samtools/usr/share/man/man1/samtools-phase.1 debian/samtools/usr/share/man/man1/samtools-quickcheck.1 debian/samtools/usr/share/man/man1/samtools-reference.1 mv debian/samtools/usr/share/man/man1/samtools-reheader.1.dh-new debian/samtools/usr/share/man/man1/samtools-reheader.1 mv debian/samtools/usr/share/man/man1/samtools-reset.1.dh-new debian/samtools/usr/share/man/man1/samtools-reset.1 mv debian/samtools/usr/share/man/man1/samtools-rmdup.1.dh-new debian/samtools/usr/share/man/man1/samtools-rmdup.1 mv debian/samtools/usr/share/man/man1/samtools-samples.1.dh-new debian/samtools/usr/share/man/man1/samtools-samples.1 mv debian/samtools/usr/share/man/man1/samtools-sort.1.dh-new debian/samtools/usr/share/man/man1/samtools-sort.1 mv debian/samtools/usr/share/man/man1/samtools-split.1.dh-new debian/samtools/usr/share/man/man1/samtools-split.1 chmod 0644 -- debian/samtools/usr/share/man/man1/samtools-reheader.1 debian/samtools/usr/share/man/man1/samtools-reset.1 debian/samtools/usr/share/man/man1/samtools-rmdup.1 debian/samtools/usr/share/man/man1/samtools-samples.1 debian/samtools/usr/share/man/man1/samtools-sort.1 debian/samtools/usr/share/man/man1/samtools-split.1 mv debian/samtools/usr/share/man/man1/ace2sam.1.dh-new debian/samtools/usr/share/man/man1/ace2sam.1 mv debian/samtools/usr/share/man/man1/samtools-addreplacerg.1.dh-new debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 mv debian/samtools/usr/share/man/man1/samtools-ampliconclip.1.dh-new debian/samtools/usr/share/man/man1/samtools-ampliconclip.1 mv debian/samtools/usr/share/man/man1/samtools-ampliconstats.1.dh-new debian/samtools/usr/share/man/man1/samtools-ampliconstats.1 mv debian/samtools/usr/share/man/man1/samtools-bedcov.1.dh-new debian/samtools/usr/share/man/man1/samtools-bedcov.1 mv debian/samtools/usr/share/man/man1/samtools-calmd.1.dh-new debian/samtools/usr/share/man/man1/samtools-calmd.1 chmod 0644 -- debian/samtools/usr/share/man/man1/ace2sam.1 debian/samtools/usr/share/man/man1/samtools-addreplacerg.1 debian/samtools/usr/share/man/man1/samtools-ampliconclip.1 debian/samtools/usr/share/man/man1/samtools-ampliconstats.1 debian/samtools/usr/share/man/man1/samtools-bedcov.1 debian/samtools/usr/share/man/man1/samtools-calmd.1 mv debian/samtools/usr/share/man/man1/samtools-depth.1.dh-new debian/samtools/usr/share/man/man1/samtools-depth.1 mv debian/samtools/usr/share/man/man1/samtools-dict.1.dh-new debian/samtools/usr/share/man/man1/samtools-dict.1 mv debian/samtools/usr/share/man/man1/samtools-faidx.1.dh-new debian/samtools/usr/share/man/man1/samtools-faidx.1 mv debian/samtools/usr/share/man/man1/samtools-fasta.1.dh-new debian/samtools/usr/share/man/man1/samtools-fasta.1 mv debian/samtools/usr/share/man/man1/samtools-fixmate.1.dh-new debian/samtools/usr/share/man/man1/samtools-fixmate.1 mv debian/samtools/usr/share/man/man1/samtools-flags.1.dh-new debian/samtools/usr/share/man/man1/samtools-flags.1 chmod 0644 -- debian/samtools/usr/share/man/man1/samtools-depth.1 debian/samtools/usr/share/man/man1/samtools-dict.1 debian/samtools/usr/share/man/man1/samtools-faidx.1 debian/samtools/usr/share/man/man1/samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fixmate.1 debian/samtools/usr/share/man/man1/samtools-flags.1 mv debian/samtools/usr/share/man/man1/samtools-stats.1.dh-new debian/samtools/usr/share/man/man1/samtools-stats.1 mv debian/samtools/usr/share/man/man1/samtools-targetcut.1.dh-new debian/samtools/usr/share/man/man1/samtools-targetcut.1 mv debian/samtools/usr/share/man/man1/samtools-tview.1.dh-new debian/samtools/usr/share/man/man1/samtools-tview.1 mv debian/samtools/usr/share/man/man1/samtools-view.1.dh-new debian/samtools/usr/share/man/man1/samtools-view.1 mv debian/samtools/usr/share/man/man1/samtools.1.dh-new debian/samtools/usr/share/man/man1/samtools.1 mv debian/samtools/usr/share/man/man1/samtools.pl.1.dh-new debian/samtools/usr/share/man/man1/samtools.pl.1 chmod 0644 -- debian/samtools/usr/share/man/man1/samtools-stats.1 debian/samtools/usr/share/man/man1/samtools-targetcut.1 debian/samtools/usr/share/man/man1/samtools-tview.1 debian/samtools/usr/share/man/man1/samtools-view.1 debian/samtools/usr/share/man/man1/samtools.1 debian/samtools/usr/share/man/man1/samtools.pl.1 mv debian/samtools/usr/share/man/man1/samtools-cat.1.dh-new debian/samtools/usr/share/man/man1/samtools-cat.1 mv debian/samtools/usr/share/man/man1/samtools-collate.1.dh-new debian/samtools/usr/share/man/man1/samtools-collate.1 mv debian/samtools/usr/share/man/man1/samtools-consensus.1.dh-new debian/samtools/usr/share/man/man1/samtools-consensus.1 mv debian/samtools/usr/share/man/man1/samtools-coverage.1.dh-new debian/samtools/usr/share/man/man1/samtools-coverage.1 mv debian/samtools/usr/share/man/man1/samtools-cram-size.1.dh-new debian/samtools/usr/share/man/man1/samtools-cram-size.1 mv debian/samtools/usr/share/man/man1/samtools-depad.1.dh-new debian/samtools/usr/share/man/man1/samtools-depad.1 chmod 0644 -- debian/samtools/usr/share/man/man1/samtools-cat.1 debian/samtools/usr/share/man/man1/samtools-collate.1 debian/samtools/usr/share/man/man1/samtools-consensus.1 debian/samtools/usr/share/man/man1/samtools-coverage.1 debian/samtools/usr/share/man/man1/samtools-cram-size.1 debian/samtools/usr/share/man/man1/samtools-depad.1 dh_lintian -a install -m0755 -d debian/samtools/usr/share/lintian/overrides install -p -m0644 debian/samtools.lintian-overrides debian/samtools/usr/share/lintian/overrides/samtools dh_perl -a mv debian/samtools.substvars.new debian/samtools.substvars dh_link -a rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 ln -s samtools-fasta.1 debian/samtools/usr/share/man/man1/samtools-fastq.1 dh_strip_nondeterminism -a Using 1687465915 as canonical time Normalizing debian/samtools/usr/share/doc/samtools/examples/ex1.sam.gz using File::StripNondeterminism::handlers::gzip dh_compress -a cd debian/samtools chmod a-x usr/share/doc/samtools/NEWS.Debian usr/share/doc/samtools/README usr/share/doc/samtools/changelog usr/share/doc/samtools/changelog.Debian usr/share/man/man1/ace2sam.1 usr/share/man/man1/samtools-addreplacerg.1 usr/share/man/man1/samtools-ampliconclip.1 usr/share/man/man1/samtools-ampliconstats.1 usr/share/man/man1/samtools-bedcov.1 usr/share/man/man1/samtools-calmd.1 usr/share/man/man1/samtools-cat.1 usr/share/man/man1/samtools-collate.1 usr/share/man/man1/samtools-consensus.1 usr/share/man/man1/samtools-coverage.1 usr/share/man/man1/samtools-cram-size.1 usr/share/man/man1/samtools-depad.1 usr/share/man/man1/samtools-depth.1 usr/share/man/man1/samtools-dict.1 usr/share/man/man1/samtools-faidx.1 usr/share/man/man1/samtools-fasta.1 usr/share/man/man1/samtools-fixmate.1 usr/share/man/man1/samtools-flags.1 usr/share/man/man1/samtools-flagstat.1 usr/share/man/man1/samtools-fqidx.1 usr/share/man/man1/samtools-head.1 usr/share/man/man1/samtools-idxstats.1 usr/share/man/man1/samtools-import.1 usr/share/man/man1/samtools-index.1 usr/share/man/man1/samtools-markdup.1 usr/share/man/man1/samtools-merge.1 usr/share/man/man1/samtools-mpileup.1 usr/share/man/man1/samtools-phase.1 usr/share/man/man1/samtools-quickcheck.1 usr/share/man/man1/samtools-reference.1 usr/share/man/man1/samtools-reheader.1 usr/share/man/man1/samtools-reset.1 usr/share/man/man1/samtools-rmdup.1 usr/share/man/man1/samtools-samples.1 usr/share/man/man1/samtools-sort.1 usr/share/man/man1/samtools-split.1 usr/share/man/man1/samtools-stats.1 usr/share/man/man1/samtools-targetcut.1 usr/share/man/man1/samtools-tview.1 usr/share/man/man1/samtools-view.1 usr/share/man/man1/samtools.1 usr/share/man/man1/samtools.pl.1 usr/share/man/man1/wgsim.1 gzip -9nf usr/share/doc/samtools/NEWS.Debian usr/share/doc/samtools/README usr/share/doc/samtools/changelog usr/share/doc/samtools/changelog.Debian usr/share/man/man1/ace2sam.1 usr/share/man/man1/samtools-addreplacerg.1 usr/share/man/man1/samtools-ampliconclip.1 usr/share/man/man1/samtools-ampliconstats.1 usr/share/man/man1/samtools-bedcov.1 usr/share/man/man1/samtools-calmd.1 usr/share/man/man1/samtools-cat.1 usr/share/man/man1/samtools-collate.1 usr/share/man/man1/samtools-consensus.1 usr/share/man/man1/samtools-coverage.1 usr/share/man/man1/samtools-cram-size.1 usr/share/man/man1/samtools-depad.1 usr/share/man/man1/samtools-depth.1 usr/share/man/man1/samtools-dict.1 usr/share/man/man1/samtools-faidx.1 usr/share/man/man1/samtools-fasta.1 usr/share/man/man1/samtools-fixmate.1 usr/share/man/man1/samtools-flags.1 usr/share/man/man1/samtools-flagstat.1 usr/share/man/man1/samtools-fqidx.1 usr/share/man/man1/samtools-head.1 usr/share/man/man1/samtools-idxstats.1 usr/share/man/man1/samtools-import.1 usr/share/man/man1/samtools-index.1 usr/share/man/man1/samtools-markdup.1 usr/share/man/man1/samtools-merge.1 usr/share/man/man1/samtools-mpileup.1 usr/share/man/man1/samtools-phase.1 usr/share/man/man1/samtools-quickcheck.1 usr/share/man/man1/samtools-reference.1 usr/share/man/man1/samtools-reheader.1 usr/share/man/man1/samtools-reset.1 usr/share/man/man1/samtools-rmdup.1 usr/share/man/man1/samtools-samples.1 usr/share/man/man1/samtools-sort.1 usr/share/man/man1/samtools-split.1 usr/share/man/man1/samtools-stats.1 usr/share/man/man1/samtools-targetcut.1 usr/share/man/man1/samtools-tview.1 usr/share/man/man1/samtools-view.1 usr/share/man/man1/samtools.1 usr/share/man/man1/samtools.pl.1 usr/share/man/man1/wgsim.1 cd '/<>' rm -f debian/samtools/usr/share/man/man1/samtools-fastq.1 debian/samtools/usr/share/man/man1/samtools-fastq.1.gz ln -s samtools-fasta.1.gz debian/samtools/usr/share/man/man1/samtools-fastq.1.gz dh_fixperms -a find debian/samtools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/samtools/usr/share/doc -type f -a -true -a ! -regex 'debian/samtools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/samtools/usr/share/man debian/samtools/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/samtools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_dwz -a install -m0755 -d debian/samtools/usr/lib/debug/.dwz/riscv64-linux-gnu dwz -mdebian/samtools/usr/lib/debug/.dwz/riscv64-linux-gnu/samtools.debug -M/usr/lib/debug/.dwz/riscv64-linux-gnu/samtools.debug -- debian/samtools/usr/bin/ace2sam debian/samtools/usr/bin/maq2sam-long debian/samtools/usr/bin/maq2sam-short debian/samtools/usr/bin/md5fa debian/samtools/usr/bin/md5sum-lite debian/samtools/usr/bin/samtools debian/samtools/usr/bin/wgsim dwz: debian/samtools/usr/bin/samtools: DWARF compression not beneficial - old size 692372 new size 711562 objcopy --compress-debug-sections debian/samtools/usr/lib/debug/.dwz/riscv64-linux-gnu/samtools.debug chmod 0644 -- debian/samtools/usr/lib/debug/.dwz/riscv64-linux-gnu/samtools.debug dh_strip -a debugedit --build-id --build-id-seed=samtools/1.17-1 debian/samtools/usr/bin/maq2sam-short debugedit: debian/samtools/usr/bin/maq2sam-short: Unknown DWARF DW_FORM_0x1f20 35853e72022a7e7f2fedb3fe335ecc960b9a730d install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/maq2sam-short debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/35/853e72022a7e7f2fedb3fe335ecc960b9a730d.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/35/853e72022a7e7f2fedb3fe335ecc960b9a730d.debug strip --remove-section=.comment --remove-section=.note -o /tmp/4FANR2df1O/strip0vLOyq debian/samtools/usr/bin/maq2sam-short chmod --reference debian/samtools/usr/bin/maq2sam-short /tmp/4FANR2df1O/strip0vLOyq cat '/tmp/4FANR2df1O/strip0vLOyq' > 'debian/samtools/usr/bin/maq2sam-short' chmod --reference /tmp/4FANR2df1O/strip0vLOyq debian/samtools/usr/bin/maq2sam-short objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/35/853e72022a7e7f2fedb3fe335ecc960b9a730d.debug debian/samtools/usr/bin/maq2sam-short /tmp/4FANR2df1O/objcopy8RY7W7 chmod --reference debian/samtools/usr/bin/maq2sam-short /tmp/4FANR2df1O/objcopy8RY7W7 cat '/tmp/4FANR2df1O/objcopy8RY7W7' > 'debian/samtools/usr/bin/maq2sam-short' chmod --reference /tmp/4FANR2df1O/objcopy8RY7W7 debian/samtools/usr/bin/maq2sam-short debugedit --build-id --build-id-seed=samtools/1.17-1 debian/samtools/usr/bin/wgsim debugedit: debian/samtools/usr/bin/wgsim: Unknown DWARF DW_FORM_0x1f20 91db522d8f1c514e46f002abf472d641bf379576 install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91 objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/wgsim debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91/db522d8f1c514e46f002abf472d641bf379576.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91/db522d8f1c514e46f002abf472d641bf379576.debug strip --remove-section=.comment --remove-section=.note -o /tmp/4FANR2df1O/stripcsCmMn debian/samtools/usr/bin/wgsim chmod --reference debian/samtools/usr/bin/wgsim /tmp/4FANR2df1O/stripcsCmMn cat '/tmp/4FANR2df1O/stripcsCmMn' > 'debian/samtools/usr/bin/wgsim' chmod --reference /tmp/4FANR2df1O/stripcsCmMn debian/samtools/usr/bin/wgsim objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/91/db522d8f1c514e46f002abf472d641bf379576.debug debian/samtools/usr/bin/wgsim /tmp/4FANR2df1O/objcopyiaoqJB chmod --reference debian/samtools/usr/bin/wgsim /tmp/4FANR2df1O/objcopyiaoqJB cat '/tmp/4FANR2df1O/objcopyiaoqJB' > 'debian/samtools/usr/bin/wgsim' chmod --reference /tmp/4FANR2df1O/objcopyiaoqJB debian/samtools/usr/bin/wgsim debugedit --build-id --build-id-seed=samtools/1.17-1 debian/samtools/usr/bin/ace2sam debugedit: debian/samtools/usr/bin/ace2sam: Unknown DWARF DW_FORM_0x1f20 e0a931d78a3e366efec163a07b824c794697952f install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/e0 objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/ace2sam debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/e0/a931d78a3e366efec163a07b824c794697952f.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/e0/a931d78a3e366efec163a07b824c794697952f.debug strip --remove-section=.comment --remove-section=.note -o /tmp/4FANR2df1O/stripDF6eLk debian/samtools/usr/bin/ace2sam chmod --reference debian/samtools/usr/bin/ace2sam /tmp/4FANR2df1O/stripDF6eLk cat '/tmp/4FANR2df1O/stripDF6eLk' > 'debian/samtools/usr/bin/ace2sam' chmod --reference /tmp/4FANR2df1O/stripDF6eLk debian/samtools/usr/bin/ace2sam objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/e0/a931d78a3e366efec163a07b824c794697952f.debug debian/samtools/usr/bin/ace2sam /tmp/4FANR2df1O/objcopyvc61af chmod --reference debian/samtools/usr/bin/ace2sam /tmp/4FANR2df1O/objcopyvc61af cat '/tmp/4FANR2df1O/objcopyvc61af' > 'debian/samtools/usr/bin/ace2sam' chmod --reference /tmp/4FANR2df1O/objcopyvc61af debian/samtools/usr/bin/ace2sam debugedit --build-id --build-id-seed=samtools/1.17-1 debian/samtools/usr/bin/samtools a09cbc9da25db0386da128171fead526f9b5314e install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/samtools debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a0/9cbc9da25db0386da128171fead526f9b5314e.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a0/9cbc9da25db0386da128171fead526f9b5314e.debug strip --remove-section=.comment --remove-section=.note -o /tmp/4FANR2df1O/stripkI27Sp debian/samtools/usr/bin/samtools chmod --reference debian/samtools/usr/bin/samtools /tmp/4FANR2df1O/stripkI27Sp cat '/tmp/4FANR2df1O/stripkI27Sp' > 'debian/samtools/usr/bin/samtools' chmod --reference /tmp/4FANR2df1O/stripkI27Sp debian/samtools/usr/bin/samtools objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/a0/9cbc9da25db0386da128171fead526f9b5314e.debug debian/samtools/usr/bin/samtools /tmp/4FANR2df1O/objcopy23AH2H chmod --reference debian/samtools/usr/bin/samtools /tmp/4FANR2df1O/objcopy23AH2H cat '/tmp/4FANR2df1O/objcopy23AH2H' > 'debian/samtools/usr/bin/samtools' chmod --reference /tmp/4FANR2df1O/objcopy23AH2H debian/samtools/usr/bin/samtools debugedit --build-id --build-id-seed=samtools/1.17-1 debian/samtools/usr/bin/md5sum-lite debugedit: debian/samtools/usr/bin/md5sum-lite: Unknown DWARF DW_FORM_0x1f21 1aa0c088644a3198c8ec074a819e42d9fb610382 install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/1a objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/md5sum-lite debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/1a/a0c088644a3198c8ec074a819e42d9fb610382.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/1a/a0c088644a3198c8ec074a819e42d9fb610382.debug strip --remove-section=.comment --remove-section=.note -o /tmp/4FANR2df1O/stripxMT8mD debian/samtools/usr/bin/md5sum-lite chmod --reference debian/samtools/usr/bin/md5sum-lite /tmp/4FANR2df1O/stripxMT8mD cat '/tmp/4FANR2df1O/stripxMT8mD' > 'debian/samtools/usr/bin/md5sum-lite' chmod --reference /tmp/4FANR2df1O/stripxMT8mD debian/samtools/usr/bin/md5sum-lite objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/1a/a0c088644a3198c8ec074a819e42d9fb610382.debug debian/samtools/usr/bin/md5sum-lite /tmp/4FANR2df1O/objcopyoaZTzC chmod --reference debian/samtools/usr/bin/md5sum-lite /tmp/4FANR2df1O/objcopyoaZTzC cat '/tmp/4FANR2df1O/objcopyoaZTzC' > 'debian/samtools/usr/bin/md5sum-lite' chmod --reference /tmp/4FANR2df1O/objcopyoaZTzC debian/samtools/usr/bin/md5sum-lite debugedit --build-id --build-id-seed=samtools/1.17-1 debian/samtools/usr/bin/maq2sam-long debugedit: debian/samtools/usr/bin/maq2sam-long: Unknown DWARF DW_FORM_0x1f20 de46b9953140c2d01decd249dccb894f17ba04d4 install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/de objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/maq2sam-long debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/de/46b9953140c2d01decd249dccb894f17ba04d4.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/de/46b9953140c2d01decd249dccb894f17ba04d4.debug strip --remove-section=.comment --remove-section=.note -o /tmp/4FANR2df1O/stripdgGYRq debian/samtools/usr/bin/maq2sam-long chmod --reference debian/samtools/usr/bin/maq2sam-long /tmp/4FANR2df1O/stripdgGYRq cat '/tmp/4FANR2df1O/stripdgGYRq' > 'debian/samtools/usr/bin/maq2sam-long' chmod --reference /tmp/4FANR2df1O/stripdgGYRq debian/samtools/usr/bin/maq2sam-long objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/de/46b9953140c2d01decd249dccb894f17ba04d4.debug debian/samtools/usr/bin/maq2sam-long /tmp/4FANR2df1O/objcopyA2gfxZ chmod --reference debian/samtools/usr/bin/maq2sam-long /tmp/4FANR2df1O/objcopyA2gfxZ cat '/tmp/4FANR2df1O/objcopyA2gfxZ' > 'debian/samtools/usr/bin/maq2sam-long' chmod --reference /tmp/4FANR2df1O/objcopyA2gfxZ debian/samtools/usr/bin/maq2sam-long debugedit --build-id --build-id-seed=samtools/1.17-1 debian/samtools/usr/bin/md5fa debugedit: debian/samtools/usr/bin/md5fa: Unknown DWARF DW_FORM_0x1f21 d155c503b35e70da5ca8f9338c48c2142facd16f install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/samtools/usr/bin/md5fa debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/d1/55c503b35e70da5ca8f9338c48c2142facd16f.debug chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/d1/55c503b35e70da5ca8f9338c48c2142facd16f.debug strip --remove-section=.comment --remove-section=.note -o /tmp/4FANR2df1O/stripZmyE51 debian/samtools/usr/bin/md5fa chmod --reference debian/samtools/usr/bin/md5fa /tmp/4FANR2df1O/stripZmyE51 cat '/tmp/4FANR2df1O/stripZmyE51' > 'debian/samtools/usr/bin/md5fa' chmod --reference /tmp/4FANR2df1O/stripZmyE51 debian/samtools/usr/bin/md5fa objcopy --add-gnu-debuglink debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.build-id/d1/55c503b35e70da5ca8f9338c48c2142facd16f.debug debian/samtools/usr/bin/md5fa /tmp/4FANR2df1O/objcopy1H9zFN chmod --reference debian/samtools/usr/bin/md5fa /tmp/4FANR2df1O/objcopy1H9zFN cat '/tmp/4FANR2df1O/objcopy1H9zFN' > 'debian/samtools/usr/bin/md5fa' chmod --reference /tmp/4FANR2df1O/objcopy1H9zFN debian/samtools/usr/bin/md5fa install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/samtools/usr/lib/debug/.dwz/riscv64-linux-gnu debian/.debhelper/samtools/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/samtools/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/samtools/usr/lib/debug install -m0755 -d debian/.debhelper/samtools/dbgsym-root/usr/share/doc ln -s samtools debian/.debhelper/samtools/dbgsym-root/usr/share/doc/samtools-dbgsym install -m0755 -d debian/.debhelper/samtools dh_makeshlibs -a rm -f debian/samtools/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/samtools/DEBIAN dpkg-shlibdeps -Tdebian/samtools.substvars debian/samtools/usr/bin/maq2sam-short debian/samtools/usr/bin/wgsim debian/samtools/usr/bin/ace2sam debian/samtools/usr/bin/samtools debian/samtools/usr/bin/md5sum-lite debian/samtools/usr/bin/maq2sam-long debian/samtools/usr/bin/md5fa dh_installdeb -a install -m0755 -d debian/samtools/DEBIAN dh_gencontrol -a install -m0755 -d debian/samtools/DEBIAN echo misc:Depends= >> debian/samtools.substvars echo misc:Pre-Depends= >> debian/samtools.substvars install -m0755 -d debian/.debhelper/samtools/dbgsym-root/DEBIAN dpkg-gencontrol -psamtools -ldebian/changelog -Tdebian/samtools.substvars -Pdebian/.debhelper/samtools/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=samtools-dbgsym "-DDepends=samtools (= \${binary:Version})" "-DDescription=debug symbols for samtools" "-DBuild-Ids=1aa0c088644a3198c8ec074a819e42d9fb610382 35853e72022a7e7f2fedb3fe335ecc960b9a730d 91db522d8f1c514e46f002abf472d641bf379576 a09cbc9da25db0386da128171fead526f9b5314e d155c503b35e70da5ca8f9338c48c2142facd16f de46b9953140c2d01decd249dccb894f17ba04d4 e0a931d78a3e366efec163a07b824c794697952f" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package samtools: substitution variable ${perl:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/DEBIAN/control dpkg-gencontrol -psamtools -ldebian/changelog -Tdebian/samtools.substvars -Pdebian/samtools dpkg-gencontrol: warning: package samtools: substitution variable ${perl:Depends} unused, but is defined chmod 0644 -- debian/samtools/DEBIAN/control dh_md5sums -a install -m0755 -d debian/samtools/DEBIAN cd debian/samtools >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/samtools/DEBIAN/md5sums install -m0755 -d debian/.debhelper/samtools/dbgsym-root/DEBIAN cd debian/.debhelper/samtools/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/samtools/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/samtools .. dpkg-deb --root-owner-group --build debian/.debhelper/samtools/dbgsym-root debian/.debhelper/scratch-space/build-samtools INFO: pkgstriptranslations version 153 INFO: pkgstriptranslations version 153 pkgstriptranslations: processing samtools (in debian/samtools); do_strip: , oemstrip: pkgstriptranslations: processing samtools-dbgsym (in debian/.debhelper/samtools/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/samtools/dbgsym-root/DEBIAN/control, package samtools-dbgsym, directory debian/.debhelper/samtools/dbgsym-root dpkg-deb: building package 'samtools-dbgsym' in 'debian/.debhelper/scratch-space/build-samtools/samtools-dbgsym_1.17-1_riscv64.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/samtools/DEBIAN/control, package samtools, directory debian/samtools .. removing usr/share/doc/samtools/changelog.gz pkgstripfiles: Running PNG optimization (using 8 cpus) for package samtools ... pkgstripfiles: No PNG files. Renaming samtools-dbgsym_1.17-1_riscv64.deb to samtools-dbgsym_1.17-1_riscv64.ddeb mv debian/.debhelper/scratch-space/build-samtools/samtools-dbgsym_1.17-1_riscv64.deb ../samtools-dbgsym_1.17-1_riscv64.ddeb dpkg-deb: building package 'samtools' in '../samtools_1.17-1_riscv64.deb'. dpkg-genbuildinfo --build=any -O../samtools_1.17-1_riscv64.buildinfo dpkg-genchanges --build=any -mLaunchpad Build Daemon -O../samtools_1.17-1_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from samtools-1.17/debian/source/options: --single-debian-patch --extend-diff-ignore=^(\.travis.*|README.md)$ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-06-23T07:26:09Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ samtools_1.17-1_riscv64.changes: -------------------------------- Format: 1.8 Date: Thu, 22 Jun 2023 22:31:55 +0200 Source: samtools Binary: samtools Built-For-Profiles: noudeb Architecture: riscv64 Version: 1.17-1 Distribution: mantic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Étienne Mollier Description: samtools - processing sequence alignments in SAM, BAM and CRAM formats Changes: samtools (1.17-1) unstable; urgency=medium . * Migrate samtools to unstable. Checksums-Sha1: 2312dc67b9d4425a396333102d3d9b854bcd4eb1 856162 samtools-dbgsym_1.17-1_riscv64.ddeb 006630fcc7f58a2e11dc5b76c4679144aa3818dd 6545 samtools_1.17-1_riscv64.buildinfo 38191c28f67f382fff6cd97478cce5e29c69ac39 600064 samtools_1.17-1_riscv64.deb Checksums-Sha256: 3a1da2491a0f1ba87ceb645874677175740c9ca8d035155769fb2ddbd042e351 856162 samtools-dbgsym_1.17-1_riscv64.ddeb c0a1f956fa66cb6a00a7cf6ca37ffed7236c9cac4e4ddd70be1b37afcc239374 6545 samtools_1.17-1_riscv64.buildinfo ea07d1edbe6b0243b84d3dcc31d5b4e974dfed605a510f24d071f659ef972284 600064 samtools_1.17-1_riscv64.deb Files: 0db2157b207cdf809e3fbe1918dd2d88 856162 debug optional samtools-dbgsym_1.17-1_riscv64.ddeb 95d46e632f228d99f43e40299b0efc6d 6545 science optional samtools_1.17-1_riscv64.buildinfo f85626ef647bdcb0e15b8cf0d30614c3 600064 science optional samtools_1.17-1_riscv64.deb /<>/samtools_1.17-1_riscv64.changes.new could not be renamed to /<>/samtools_1.17-1_riscv64.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: samtools Binary: samtools samtools-dbgsym Architecture: riscv64 Version: 1.17-1 Checksums-Md5: 0db2157b207cdf809e3fbe1918dd2d88 856162 samtools-dbgsym_1.17-1_riscv64.ddeb f85626ef647bdcb0e15b8cf0d30614c3 600064 samtools_1.17-1_riscv64.deb Checksums-Sha1: 2312dc67b9d4425a396333102d3d9b854bcd4eb1 856162 samtools-dbgsym_1.17-1_riscv64.ddeb 38191c28f67f382fff6cd97478cce5e29c69ac39 600064 samtools_1.17-1_riscv64.deb Checksums-Sha256: 3a1da2491a0f1ba87ceb645874677175740c9ca8d035155769fb2ddbd042e351 856162 samtools-dbgsym_1.17-1_riscv64.ddeb ea07d1edbe6b0243b84d3dcc31d5b4e974dfed605a510f24d071f659ef972284 600064 samtools_1.17-1_riscv64.deb Build-Origin: Ubuntu Build-Architecture: riscv64 Build-Date: Fri, 23 Jun 2023 07:26:03 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs usr-local-has-programs Installed-Build-Depends: autoconf (= 2.71-3), autoconf-archive (= 20220903-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-12), autotools-dev (= 20220109.1), base-files (= 13ubuntu1), base-passwd (= 3.6.1), bash (= 5.2.15-2ubuntu1), bash-completion (= 1:2.11-6ubuntu1), binutils (= 2.40.50.20230622-1ubuntu1), binutils-common (= 2.40.50.20230622-1ubuntu1), binutils-riscv64-linux-gnu (= 2.40.50.20230622-1ubuntu1), bsdextrautils (= 2.38.1-5ubuntu2), bsdutils (= 1:2.38.1-5ubuntu2), build-essential (= 12.9ubuntu3), bzip2 (= 1.0.8-5build1), coreutils (= 9.1-1ubuntu2), cpp (= 4:12.2.0-3ubuntu1), cpp-12 (= 12.3.0-3ubuntu1), dash (= 0.5.12-2ubuntu1), debconf (= 1.5.82), debhelper (= 13.11.4ubuntu3), debianutils (= 5.7-0.4), debugedit (= 1:5.0-5), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.21.22ubuntu1), dpkg-dev (= 1.21.22ubuntu1), dwz (= 0.15-1), file (= 1:5.44-3), findutils (= 4.9.0-4ubuntu1), g++ (= 4:12.2.0-3ubuntu1), g++-12 (= 12.3.0-3ubuntu1), gcc (= 4:12.2.0-3ubuntu1), gcc-12 (= 12.3.0-3ubuntu1), gcc-12-base (= 12.3.0-3ubuntu1), gcc-13-base (= 13.1.0-6ubuntu1), gettext (= 0.21-12), gettext-base (= 0.21-12), grep (= 3.8-5), groff-base (= 1.22.4-10), gzip (= 1.12-1ubuntu1), hostname (= 3.23+nmu1ubuntu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 13.1.0-6ubuntu1), libatomic1 (= 13.1.0-6ubuntu1), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.0.9-1), libaudit1 (= 1:3.0.9-1), libbinutils (= 2.40.50.20230622-1ubuntu1), libblkid1 (= 2.38.1-5ubuntu2), libbrotli1 (= 1.0.9-2build8), libbz2-1.0 (= 1.0.8-5build1), libbz2-dev (= 1.0.8-5build1), libc-bin (= 2.37-0ubuntu2), libc-dev-bin (= 2.37-0ubuntu2), libc6 (= 2.37-0ubuntu2), libc6-dev (= 2.37-0ubuntu2), libcap-ng0 (= 0.8.3-1build2), libcap2 (= 1:2.66-4ubuntu1), libcc1-0 (= 13.1.0-6ubuntu1), libcom-err2 (= 1.47.0-1ubuntu1), libcrypt-dev (= 1:4.4.35-1), libcrypt1 (= 1:4.4.35-1), libctf-nobfd0 (= 2.40.50.20230622-1ubuntu1), libctf0 (= 2.40.50.20230622-1ubuntu1), libcurl3-gnutls (= 7.88.1-10ubuntu1), libcurl4-gnutls-dev (= 7.88.1-10ubuntu1), libdb5.3 (= 5.3.28+dfsg2-1), libdebconfclient0 (= 0.267ubuntu1), libdebhelper-perl (= 13.11.4ubuntu3), libdeflate-dev (= 1.15-1), libdeflate0 (= 1.15-1), libdpkg-perl (= 1.21.22ubuntu1), libdw1 (= 0.188-2.1), libelf1 (= 0.188-2.1), libffi8 (= 3.4.4-1), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-12-dev (= 12.3.0-3ubuntu1), libgcc-s1 (= 13.1.0-6ubuntu1), libgcrypt20 (= 1.10.1-3ubuntu1), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1ubuntu1), libgnutls30 (= 3.7.9-2ubuntu1), libgomp1 (= 13.1.0-6ubuntu1), libgpg-error0 (= 1.46-1), libgssapi-krb5-2 (= 1.20.1-2), libhogweed6 (= 3.8.1-2), libhts-dev (= 1.17+ds-1), libhts3 (= 1.17+ds-1), libhtscodecs2 (= 1.5.0-1), libicu72 (= 72.1-3ubuntu2), libidn2-0 (= 2.3.3-1build1), libio-pty-perl (= 1:1.17-1), libisl23 (= 0.26-3), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-2), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-2), libkrb5support0 (= 1.20.1-2), libldap2 (= 2.6.3+dfsg-1~exp1ubuntu2), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.4.1-0.2), liblzma5 (= 5.4.1-0.2), libmagic-mgc (= 1:5.44-3), libmagic1 (= 1:5.44-3), libmd0 (= 1.1.0-1), libmount1 (= 2.38.1-5ubuntu2), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.0-1), libncurses-dev (= 6.4-4), libncurses6 (= 6.4-4), libncursesw6 (= 6.4-4), libnettle8 (= 3.8.1-2), libnghttp2-14 (= 1.54.0-1), libnsl-dev (= 1.3.0-2build2), libnsl2 (= 1.3.0-2build2), libp11-kit0 (= 0.24.1-2ubuntu1), libpam-modules (= 1.5.2-6ubuntu1), libpam-modules-bin (= 1.5.2-6ubuntu1), libpam-runtime (= 1.5.2-6ubuntu1), libpam0g (= 1.5.2-6ubuntu1), libpcre2-8-0 (= 10.42-1), libperl5.36 (= 5.36.0-7ubuntu1), libpipeline1 (= 1.5.7-1), libpkgconf3 (= 1.8.1-2), libpsl5 (= 0.21.2-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2build4), libsasl2-2 (= 2.1.28+dfsg1-1), libsasl2-modules-db (= 2.1.28+dfsg1-1), libselinux1 (= 3.4-1build4), libsmartcols1 (= 2.38.1-5ubuntu2), libssh-4 (= 0.10.5-2), libssl3 (= 3.0.9-1ubuntu1), libstdc++-12-dev (= 12.3.0-3ubuntu1), libstdc++6 (= 13.1.0-6ubuntu1), libsub-override-perl (= 0.09-4), libsystemd0 (= 252.5-2ubuntu3), libtasn1-6 (= 4.19.0-2), libtinfo6 (= 6.4-4), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-5), libuchardet0 (= 0.0.7-1build2), libudev1 (= 252.5-2ubuntu3), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-5ubuntu2), libxml2 (= 2.9.14+dfsg-1.2), libzstd1 (= 1.5.4+dfsg2-5), linux-libc-dev (= 6.3.0-7.7), login (= 1:4.13+dfsg1-1ubuntu1), lto-disabled-list (= 41), m4 (= 1.4.19-3), make (= 4.3-4.1build1), man-db (= 2.11.2-2), mawk (= 1.3.4.20230525-1), ncurses-base (= 6.4-4), ncurses-bin (= 6.4-4), patch (= 2.7.6-7build2), perl (= 5.36.0-7ubuntu1), perl-base (= 5.36.0-7ubuntu1), perl-modules-5.36 (= 5.36.0-7ubuntu1), pkg-config (= 1.8.1-2), pkgconf (= 1.8.1-2), pkgconf-bin (= 1.8.1-2), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-0ubuntu6), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.06-4ubuntu1), tabix (= 1.17+ds-1), tar (= 1.34+dfsg-1.2ubuntu1), usrmerge (= 35ubuntu1), util-linux (= 2.38.1-5ubuntu2), util-linux-extra (= 2.38.1-5ubuntu2), xz-utils (= 5.4.1-0.2), zlib1g (= 1:1.2.13.dfsg-1ubuntu4), zlib1g-dev (= 1:1.2.13.dfsg-1ubuntu4) Environment: DEB_BUILD_OPTIONS="nocheck parallel=8" DEB_BUILD_PROFILES="noudeb" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1687465915" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ samtools_1.17-1_riscv64.deb --------------------------- new Debian package, version 2.0. size 600064 bytes: control archive=2917 bytes. 913 bytes, 18 lines control 5608 bytes, 82 lines md5sums Package: samtools Version: 1.17-1 Architecture: riscv64 Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1175 Depends: libc6 (>= 2.34), libhts3 (>= 1.17), libncurses6 (>= 6), libtinfo6 (>= 6), zlib1g (>= 1:1.1.4) Suggests: cwltool Section: science Priority: optional Homepage: https://www.htslib.org/ Description: processing sequence alignments in SAM, BAM and CRAM formats Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) and CRAM formats, does sorting, merging and indexing, and allows one to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM or CRAM (not SAM) file on a remote FTP or HTTP server. drwxr-xr-x root/root 0 2023-06-22 20:31 ./ drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/ drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/bin/ -rwxr-xr-x root/root 18880 2023-06-22 20:31 ./usr/bin/ace2sam -rwxr-xr-x root/root 5443 2023-06-22 20:31 ./usr/bin/blast2sam.pl -rwxr-xr-x root/root 3360 2023-06-22 20:31 ./usr/bin/bowtie2sam.pl -rwxr-xr-x root/root 17996 2023-06-22 20:31 ./usr/bin/export2sam.pl -rwxr-xr-x root/root 3300 2023-06-22 20:31 ./usr/bin/fasta-sanitize.pl -rwxr-xr-x root/root 6121 2023-06-22 20:31 ./usr/bin/interpolate_sam.pl -rwxr-xr-x root/root 10648 2023-06-22 20:31 ./usr/bin/maq2sam-long -rwxr-xr-x root/root 10648 2023-06-22 20:31 ./usr/bin/maq2sam-short -rwxr-xr-x root/root 10672 2023-06-22 20:31 ./usr/bin/md5fa -rwxr-xr-x root/root 6504 2023-06-22 20:31 ./usr/bin/md5sum-lite -rwxr-xr-x root/root 7969 2023-06-22 20:31 ./usr/bin/novo2sam.pl -rwxr-xr-x root/root 44331 2023-06-22 20:31 ./usr/bin/plot-ampliconstats -rwxr-xr-x root/root 50549 2023-06-22 20:31 ./usr/bin/plot-bamstats -rwxr-xr-x root/root 3204 2023-06-22 20:31 ./usr/bin/psl2sam.pl -rwxr-xr-x root/root 8957 2023-06-22 20:31 ./usr/bin/sam2vcf.pl -rwxr-xr-x root/root 561520 2023-06-22 20:31 ./usr/bin/samtools -rwxr-xr-x root/root 16474 2023-06-22 20:31 ./usr/bin/samtools.pl -rwxr-xr-x root/root 11333 2023-06-22 20:31 ./usr/bin/seq_cache_populate.pl -rwxr-xr-x root/root 3905 2023-06-22 20:31 ./usr/bin/soap2sam.pl -rwxr-xr-x root/root 27192 2023-06-22 20:31 ./usr/bin/wgsim -rwxr-xr-x root/root 12542 2023-06-22 20:31 ./usr/bin/wgsim_eval.pl -rwxr-xr-x root/root 3579 2023-06-22 20:31 ./usr/bin/zoom2sam.pl drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/ drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/commonwl/ -rwxr-xr-x root/root 1906 2023-06-11 13:09 ./usr/share/commonwl/samtools-faidx.cwl -rwxr-xr-x root/root 1979 2023-06-11 13:09 ./usr/share/commonwl/samtools-index.cwl -rwxr-xr-x root/root 1627 2023-06-11 13:09 ./usr/share/commonwl/samtools-rmdup.cwl -rwxr-xr-x root/root 2834 2023-06-11 13:09 ./usr/share/commonwl/samtools-sort.cwl -rwxr-xr-x root/root 6224 2023-06-11 13:09 ./usr/share/commonwl/samtools-view.cwl drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/doc/samtools/ -rw-r--r-- root/root 828 2023-02-21 12:24 ./usr/share/doc/samtools/AUTHORS -rw-r--r-- root/root 369 2023-06-11 13:09 ./usr/share/doc/samtools/NEWS.Debian.gz -rw-r--r-- root/root 497 2023-06-11 13:09 ./usr/share/doc/samtools/README.Debian -rw-r--r-- root/root 2479 2023-02-21 12:24 ./usr/share/doc/samtools/README.gz -rw-r--r-- root/root 1777 2023-06-22 20:31 ./usr/share/doc/samtools/changelog.Debian.gz -rw-r--r-- root/root 2250 2023-06-11 13:09 ./usr/share/doc/samtools/copyright drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/doc/samtools/examples/ -rw-r--r-- root/root 1315 2023-02-21 12:24 ./usr/share/doc/samtools/examples/00README.txt -rw-r--r-- root/root 3225 2023-02-21 12:24 ./usr/share/doc/samtools/examples/ex1.fa -rw-r--r-- root/root 114565 2023-06-22 20:31 ./usr/share/doc/samtools/examples/ex1.sam.gz -rw-r--r-- root/root 98 2023-02-21 12:24 ./usr/share/doc/samtools/examples/toy.fa -rw-r--r-- root/root 786 2023-02-21 12:24 ./usr/share/doc/samtools/examples/toy.sam drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/lintian/ drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 168 2023-06-12 18:58 ./usr/share/lintian/overrides/samtools drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/man/ drwxr-xr-x root/root 0 2023-06-22 20:31 ./usr/share/man/man1/ -rw-r--r-- root/root 462 2023-06-22 20:31 ./usr/share/man/man1/ace2sam.1.gz -rw-r--r-- root/root 1639 2023-06-22 20:31 ./usr/share/man/man1/samtools-addreplacerg.1.gz -rw-r--r-- root/root 2314 2023-06-22 20:31 ./usr/share/man/man1/samtools-ampliconclip.1.gz -rw-r--r-- root/root 5839 2023-06-22 20:31 ./usr/share/man/man1/samtools-ampliconstats.1.gz -rw-r--r-- root/root 2017 2023-06-22 20:31 ./usr/share/man/man1/samtools-bedcov.1.gz -rw-r--r-- root/root 2301 2023-06-22 20:31 ./usr/share/man/man1/samtools-calmd.1.gz -rw-r--r-- root/root 1543 2023-06-22 20:31 ./usr/share/man/man1/samtools-cat.1.gz -rw-r--r-- root/root 2472 2023-06-22 20:31 ./usr/share/man/man1/samtools-collate.1.gz -rw-r--r-- root/root 5618 2023-06-22 20:31 ./usr/share/man/man1/samtools-consensus.1.gz -rw-r--r-- root/root 2419 2023-06-22 20:31 ./usr/share/man/man1/samtools-coverage.1.gz -rw-r--r-- root/root 3179 2023-06-22 20:31 ./usr/share/man/man1/samtools-cram-size.1.gz -rw-r--r-- root/root 1754 2023-06-22 20:31 ./usr/share/man/man1/samtools-depad.1.gz -rw-r--r-- root/root 3189 2023-06-22 20:31 ./usr/share/man/man1/samtools-depth.1.gz -rw-r--r-- root/root 1684 2023-06-22 20:31 ./usr/share/man/man1/samtools-dict.1.gz -rw-r--r-- root/root 2119 2023-06-22 20:31 ./usr/share/man/man1/samtools-faidx.1.gz -rw-r--r-- root/root 3947 2023-06-22 20:31 ./usr/share/man/man1/samtools-fasta.1.gz lrwxrwxrwx root/root 0 2023-06-22 20:31 ./usr/share/man/man1/samtools-fastq.1.gz -> samtools-fasta.1.gz -rw-r--r-- root/root 1652 2023-06-22 20:31 ./usr/share/man/man1/samtools-fixmate.1.gz -rw-r--r-- root/root 1499 2023-06-22 20:31 ./usr/share/man/man1/samtools-flags.1.gz -rw-r--r-- root/root 2603 2023-06-22 20:31 ./usr/share/man/man1/samtools-flagstat.1.gz -rw-r--r-- root/root 2168 2023-06-22 20:31 ./usr/share/man/man1/samtools-fqidx.1.gz -rw-r--r-- root/root 1335 2023-06-22 20:31 ./usr/share/man/man1/samtools-head.1.gz -rw-r--r-- root/root 1413 2023-06-22 20:31 ./usr/share/man/man1/samtools-idxstats.1.gz -rw-r--r-- root/root 3421 2023-06-22 20:31 ./usr/share/man/man1/samtools-import.1.gz -rw-r--r-- root/root 1932 2023-06-22 20:31 ./usr/share/man/man1/samtools-index.1.gz -rw-r--r-- root/root 3860 2023-06-22 20:31 ./usr/share/man/man1/samtools-markdup.1.gz -rw-r--r-- root/root 3346 2023-06-22 20:31 ./usr/share/man/man1/samtools-merge.1.gz -rw-r--r-- root/root 7005 2023-06-22 20:31 ./usr/share/man/man1/samtools-mpileup.1.gz -rw-r--r-- root/root 1437 2023-06-22 20:31 ./usr/share/man/man1/samtools-phase.1.gz -rw-r--r-- root/root 1679 2023-06-22 20:31 ./usr/share/man/man1/samtools-quickcheck.1.gz -rw-r--r-- root/root 1880 2023-06-22 20:31 ./usr/share/man/man1/samtools-reference.1.gz -rw-r--r-- root/root 1958 2023-06-22 20:31 ./usr/share/man/man1/samtools-reheader.1.gz -rw-r--r-- root/root 2306 2023-06-22 20:31 ./usr/share/man/man1/samtools-reset.1.gz -rw-r--r-- root/root 1471 2023-06-22 20:31 ./usr/share/man/man1/samtools-rmdup.1.gz -rw-r--r-- root/root 2281 2023-06-22 20:31 ./usr/share/man/man1/samtools-samples.1.gz -rw-r--r-- root/root 3706 2023-06-22 20:31 ./usr/share/man/man1/samtools-sort.1.gz -rw-r--r-- root/root 1644 2023-06-22 20:31 ./usr/share/man/man1/samtools-split.1.gz -rw-r--r-- root/root 6260 2023-06-22 20:31 ./usr/share/man/man1/samtools-stats.1.gz -rw-r--r-- root/root 1428 2023-06-22 20:31 ./usr/share/man/man1/samtools-targetcut.1.gz -rw-r--r-- root/root 2045 2023-06-22 20:31 ./usr/share/man/man1/samtools-tview.1.gz -rw-r--r-- root/root 7041 2023-06-22 20:31 ./usr/share/man/man1/samtools-view.1.gz -rw-r--r-- root/root 15923 2023-06-22 20:31 ./usr/share/man/man1/samtools.1.gz -rw-r--r-- root/root 410 2023-06-22 20:31 ./usr/share/man/man1/samtools.pl.1.gz -rw-r--r-- root/root 518 2023-06-22 20:31 ./usr/share/man/man1/wgsim.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: riscv64 Build Type: any Build-Space: 29168 Build-Time: 382 Distribution: mantic-proposed Host Architecture: riscv64 Install-Time: 156 Job: samtools_1.17-1.dsc Machine Architecture: riscv64 Package: samtools Package-Time: 570 Source-Version: 1.17-1 Space: 29168 Status: successful Version: 1.17-1 -------------------------------------------------------------------------------- Finished at 2023-06-23T07:26:09Z Build needed 00:09:30, 29168k disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=mantic --arch=riscv64 PACKAGEBUILD-26332610 Scanning for processes to kill in build PACKAGEBUILD-26332610 RUN: /usr/share/launchpad-buildd/bin/in-target umount-chroot --backend=chroot --series=mantic --arch=riscv64 PACKAGEBUILD-26332610 Stopping target for build PACKAGEBUILD-26332610 RUN: /usr/share/launchpad-buildd/bin/in-target remove-build --backend=chroot --series=mantic --arch=riscv64 PACKAGEBUILD-26332610 Removing build PACKAGEBUILD-26332610