samtools 0.1.18-1ubuntu2 source package in Ubuntu


samtools (0.1.18-1ubuntu2) precise; urgency=low

  * No-change rebuild to drop spurious libsfgcc1 dependency on armhf.
 -- Adam Conrad <>   Fri, 02 Dec 2011 21:19:17 -0700

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Uploaded by:
Adam Conrad on 2011-12-03
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Ubuntu Developers
Low Urgency

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Precise release on 2011-12-03 universe science


File Size SHA-256 Checksum
samtools_0.1.18.orig.tar.bz2 370.4 KiB f3faaf34430d4782956562eb72906289e8e34d44d0c4d73837bdbeead7746b16
samtools_0.1.18-1ubuntu2.debian.tar.gz 7.9 KiB 46f97c21f3fe65235ec1f28b7d66a78ace673f323b3b6166102f351a6dbf5d35
samtools_0.1.18-1ubuntu2.dsc 1.5 KiB 2c4a015d430ea3ea5aa1bd1b6bdea3ec6d6ddf87f111a4b971526c7fec69282e

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Binary packages built by this source

libbam-dev: manipulates nucleotide sequence alignments in BAM or SAM format

 The BAM library provides I/O and various operations on manipulating nucleotide
 sequence alignments in the BAM (Binary Alignment/Mapping) or SAM (Sequence
 Alignment/Map) format. It now supports importing from or exporting to SAM,
 sorting, merging, generating pileup, and quickly retrieval of reads overlapped
 with a specified region.

samtools: processing sequence alignments in SAM and BAM formats

 Samtools is a set of utilities that manipulate nucleotide sequence alignments
 in the binary BAM format. It imports from and exports to the ascii SAM
 (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows
 to retrieve reads in any regions swiftly. It is designed to work on a stream,
 and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.