ruby-bio: FTBFS: Error: libxml-ruby library is not present.

Bug #1255633 reported by Andreas Moog on 2013-11-27
6
This bug affects 1 person
Affects Status Importance Assigned to Milestone
ruby-bio (Debian)
Fix Released
Unknown
ruby-bio (Ubuntu)
High
Unassigned

Bug Description

Imported from Debian bug http://bugs.debian.org/730644:

Package: ruby-bio
Version: 1.4.3.0001-1
Severity: serious

Hello there,

I tried building your package in a clean unstable chroot, but it failed:

> ===============================================================================
> Failure:
> Error: libxml-ruby library is not present. Please install libxml-ruby library. It is needed for Bio::PhyloXML module. Unit test for PhyloXML will not be performed.
> <nil> is not true.
> test_libxml(Bio::TestPhyloXMLWriter_Check_LibXML)
> /«PKGBUILDDIR»/test/unit/bio/db/test_phyloxml_writer.rb:31:in `test_libxml'
> 28: module Bio
> 29: class TestPhyloXMLWriter_Check_LibXML < Test::Unit::TestCase
> 30: def test_libxml
> => 31: assert(defined?(LibXML),
> 32: "Error: libxml-ruby library is not present. Please install libxml-ruby library. It is needed for Bio::PhyloXML module. Unit test for PhyloXML will not be performed.")
> 33: end
> 34: end #class TestPhyloXMLWriter_Check_LibXML
> ===============================================================================
> F
> ===============================================================================
> Failure:
> Error: libxml-ruby library is not present. Please install libxml-ruby library. It is needed for Bio::PhyloXML module. Unit test for PhyloXML will not be performed.
> <nil> is not true.
> test_libxml(Bio::TestPhyloXML_Check_LibXML)
> /«PKGBUILDDIR»/test/unit/bio/db/test_phyloxml.rb:29:in `test_libxml'
> 26: module Bio
> 27: class TestPhyloXML_Check_LibXML < Test::Unit::TestCase
> 28: def test_libxml
> => 29: assert(defined?(LibXML),
> 30: "Error: libxml-ruby library is not present. Please install libxml-ruby library. It is needed for Bio::PhyloXML module. Unit test for PhyloXML will not be performed.")
> 31: end
> 32: end #class TestPhyloXML_LibXMLCheck
> ===============================================================================

I don't know why it is failing, the libxml-ruby library is pulled in via
the build-depends. I've attached a full buildlog.

Andreas Moog (ampelbein) on 2013-11-27
Changed in ruby-bio (Ubuntu):
importance: Undecided → High
tags: added: ftbfs trusty
description: updated
Changed in ruby-bio (Debian):
importance: Undecided → Unknown
Changed in ruby-bio (Debian):
status: New → Fix Released
Andreas Moog (ampelbein) on 2013-12-25
Changed in ruby-bio (Ubuntu):
status: New → Fix Released
To post a comment you must log in.
This report contains Public information  Edit
Everyone can see this information.

Other bug subscribers

Remote bug watches

Bug watches keep track of this bug in other bug trackers.