roary 3.13.0+dfsg-1 source package in Ubuntu


roary (3.13.0+dfsg-1) unstable; urgency=medium

  * New upstream release.
  * Use debhelper 12.
  * Bump Standards-Version.
  * Update source lintian override location and tags.

 -- Sascha Steinbiss <email address hidden>  Fri, 08 Nov 2019 14:37:07 +0100

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Debian Med
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Debian Med
Medium Urgency

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File Size SHA-256 Checksum
roary_3.13.0+dfsg-1.dsc 2.4 KiB 76251aea7f3d3b51e9a79c1f2ce1549dadbac5ba96877f7f5fddbe00d276935e
roary_3.13.0+dfsg.orig.tar.xz 202.5 KiB 5450fe6f4bab8b27829d2ec6836c0a8c9a38d42b3891fab29b10a9587dee2fd1
roary_3.13.0+dfsg-1.debian.tar.xz 6.5 KiB f316c055c6c368084b80133c39749d78c70f229ecb1e5a8134ee35c4e7d1e830

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Binary packages built by this source

roary: high speed stand alone pan genome pipeline

 Roary is a high speed stand alone pan genome pipeline, which takes annotated
 assemblies in GFF3 format (as produced, for instance, by Prokka) and calculates
 the pan genome. Using a standard desktop PC, it can analyse datasets with
 thousands of samples, something which is computationally infeasible with
 existing methods, without compromising the quality of the results. 128 samples
 can be analysed in under 1 hour using 1 GB of RAM and a single processor.
 To perform this analysis using existing methods would take weeks and hundreds
 of GB of RAM. Roary is not intended for meta-genomics or for comparing
 extremely diverse sets of genomes.