Ubuntu
rna-star package

rna-star 2.7.1a+dfsg-2 source package in Ubuntu

Changelog

rna-star (2.7.1a+dfsg-2) unstable; urgency=medium

  [ Helmut Grohne ]
  * Fix FTCBFS: Let dh_auto_build pass cross tools to make.
    Closes: #932066

 -- Sascha Steinbiss <email address hidden>  Wed, 17 Jul 2019 23:19:13 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
amd64 arm64 ppc64el mips64el
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
rna-star_2.7.1a+dfsg-2.dsc 1.8 KiB a0837af87f9e9d946126c8a3fc0b64c562a700339b0f2115746c12740efd364f
rna-star_2.7.1a+dfsg.orig.tar.xz 363.6 KiB 502492bce29a7c9fe8adaf9bff9a43fc4fdb0472cc24e5a18fa3be8c7590cd40
rna-star_2.7.1a+dfsg-2.debian.tar.xz 366.2 KiB 978066894803e9559adb512345b148066036cf103188a97b69cd2e6f2601daa2

Available diffs

No changes file available.

Binary packages built by this source

rna-star: ultrafast universal RNA-seq aligner

 Spliced Transcripts Alignment to a Reference (STAR) software based on a
 previously undescribed RNA-seq alignment algorithm that uses sequential
 maximum mappable seed search in uncompressed suffix arrays followed by
 seed clustering and stitching procedure. STAR outperforms other aligners
 by a factor of >50 in mapping speed, aligning to the human genome 550
 million 2 × 76 bp paired-end reads per hour on a modest 12-core server,
 while at the same time improving alignment sensitivity and precision. In
 addition to unbiased de novo detection of canonical junctions, STAR can
 discover non-canonical splices and chimeric (fusion) transcripts, and is
 also capable of mapping full-length RNA sequences. Using Roche 454
 sequencing of reverse transcription polymerase chain reaction amplicons,
 the authors experimentally validated 1960 novel intergenic splice
 junctions with an 80-90% success rate, corroborating the high precision
 of the STAR mapping strategy.

rna-star-dbgsym: No summary available for rna-star-dbgsym in ubuntu eoan.

No description available for rna-star-dbgsym in ubuntu eoan.