New tests added last version are failing

Bug #2071941 reported by Miriam España Acebal
6
This bug affects 1 person
Affects Status Importance Assigned to Milestone
r-cran-bayestestr (Ubuntu)
In Progress
Undecided
Miriam España Acebal

Bug Description

Autopkgtests are failing [1]. Important part of the log is:

 ══ Failed tests ═══════════════════════════════════════════════════════════════
213s ── Error ('test-rope_range.R:34:3'): rope_range ────────────────────────────────
213s Error in `.fun(model_code = .x1)`: Boost not found; call install.packages('BH')
213s Backtrace:
213s ▆
213s 1. ├─base::suppressWarnings(...) at test-rope_range.R:34:3
213s 2. │ └─base::withCallingHandlers(...)
213s 3. └─brms::brm(mpg ~ wt + gear, data = mtcars, iter = 300)
213s 4. └─brms::do_call(compile_model, compile_args)
213s 5. └─brms:::eval2(call, envir = args, enclos = envir)
213s 6. └─base::eval(expr, envir, ...)
213s 7. └─base::eval(expr, envir, ...)
213s 8. └─brms (local) .fun(...)
213s 9. └─brms (local) .compile_model(model, ...)
213s 10. ├─brms:::eval_silent(...)
213s 11. │ └─base::eval(expr, envir)
213s 12. │ └─base::eval(expr, envir)
213s 13. └─brms::do_call(rstan::stan_model, args)
213s 14. └─brms:::eval2(call, envir = args, enclos = envir)
213s 15. └─base::eval(expr, envir, ...)
213s 16. └─base::eval(expr, envir, ...)
213s 17. └─rstan (local) .fun(model_code = .x1)
213s ── Error ('test-rope_range.R:45:3'): rope_range (multivariate) ─────────────────
213s Error in `.fun(model_code = .x1)`: Boost not found; call install.packages('BH')
213s Backtrace:
213s ▆
213s 1. ├─base::suppressWarnings(...) at test-rope_range.R:45:3
213s 2. │ └─base::withCallingHandlers(...)
213s 3. └─brms::brm(...)
213s 4. └─brms::do_call(compile_model, compile_args)
213s 5. └─brms:::eval2(call, envir = args, enclos = envir)
213s 6. └─base::eval(expr, envir, ...)
213s 7. └─base::eval(expr, envir, ...)
213s 8. └─brms (local) .fun(...)
213s 9. └─brms (local) .compile_model(model, ...)
213s 10. ├─brms:::eval_silent(...)
213s 11. │ └─base::eval(expr, envir)
213s 12. │ └─base::eval(expr, envir)
213s 13. └─brms::do_call(rstan::stan_model, args)
213s 14. └─brms:::eval2(call, envir = args, enclos = envir)
213s 15. └─base::eval(expr, envir, ...)
213s 16. └─base::eval(expr, envir, ...)
213s 17. └─rstan (local) .fun(model_code = .x1)
213s ── Error ('test-rope.R:75:1'): (code run outside of `test_that()`) ─────────────
213s Error in `.fun(model_code = .x1)`: Boost not found; call install.packages('BH')
213s Backtrace:
213s ▆
213s 1. ├─base::suppressWarnings(...) at test-rope.R:75:1
213s 2. │ └─base::withCallingHandlers(...)
213s 3. └─brms::brm(mpg ~ wt + gear, data = mtcars, iter = 500)
213s 4. └─brms::do_call(compile_model, compile_args)
213s 5. └─brms:::eval2(call, envir = args, enclos = envir)
213s 6. └─base::eval(expr, envir, ...)
213s 7. └─base::eval(expr, envir, ...)
213s 8. └─brms (local) .fun(...)
213s 9. └─brms (local) .compile_model(model, ...)
213s 10. ├─brms:::eval_silent(...)
213s 11. │ └─base::eval(expr, envir)
213s 12. │ └─base::eval(expr, envir)
213s 13. └─brms::do_call(rstan::stan_model, args)
213s 14. └─brms:::eval2(call, envir = args, enclos = envir)
213s 15. └─base::eval(expr, envir, ...)
213s 16. └─base::eval(expr, envir, ...)
213s 17. └─rstan (local) .fun(model_code = .x1)
213s

Those failing tests were commented in previous package (e.g. [2]).

The "Boost not found; call install.packages('BH')" suggest that r-cran-bh package is not installed, which is false. Some online researching suggests a restart, so I'm adding that to the test control.

If not successful on that, I suggest to comment the test again to unblock
r-cran-effectsize [3]

[1] https://objectstorage.prodstack5.canonical.com/swift/v1/AUTH_0f9aae918d5b4744bf7b827671c86842/autopkgtest-oracular/oracular/arm64/r/r-cran-bayestestr/20240701_001624_0d606@/log.gz
[2] https://salsa.debian.org/r-pkg-team/r-cran-bayestestr/-/blob/ad3c30a8154f677cab9f124290c4fb575cc14f05/tests/testthat/test-rope_range.R#L32
[3] https://ubuntu-archive-team.ubuntu.com/proposed-migration/update_excuses.html#r-cran-effectsize

Revision history for this message
Miriam España Acebal (mirespace) wrote :

(ofyi) The following didn't work:

+++ b/debian/tests/control
[...]
-Restrictions: allow-stderr
+Restrictions: allow-stderr, needs-reboot

Changed in r-cran-bayestestr (Ubuntu):
assignee: nobody → Miriam España Acebal (mirespace)
status: New → In Progress
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