Ubuntu
r-cran-alakazam package

r-cran-alakazam 1.2.1-1 source package in Ubuntu

Changelog

r-cran-alakazam (1.2.1-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.6.1 (routine-update)
  * dh-update-R to update Build-Depends (routine-update)
  * Set upstream metadata fields: Archive, Bug-Database, Repository.

 -- Andreas Tille <email address hidden>  Thu, 22 Sep 2022 06:37:51 +0200

Upload details

Uploaded by:
Debian R Packages Maintainers
Uploaded to:
Sid
Original maintainer:
Debian R Packages Maintainers
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
r-cran-alakazam_1.2.1-1.dsc 2.4 KiB b3593f67bc25f4d5ff4b6b5b2880969797dbe67d2d4d695ffd7cd0d0d58e99a0
r-cran-alakazam_1.2.1.orig.tar.gz 2.0 MiB 161c87a946857da2b876f679abc4ae8d265835c92c0d56e0ecacf0aea04084d4
r-cran-alakazam_1.2.1-1.debian.tar.xz 13.7 KiB 844f1c29c707218989cadd189cae5f8dd19f4552bebb60553ecfd720e7fa556d

Available diffs

No changes file available.

Binary packages built by this source

r-cran-alakazam: Immunoglobulin Clonal Lineage and Diversity Analysis

 Alakazam is part of the Immcantation analysis framework for Adaptive
 Immune Receptor Repertoire sequencing (AIRR-seq) and provides a set of
 tools to investigate lymphocyte receptor clonal lineages, diversity,
 gene usage, and other repertoire level properties, with a focus on
 high-throughput immunoglobulin (Ig) sequencing.
 .
 Alakazam serves five main purposes:
  * Providing core functionality for other R packages in the Immcantation
    framework. This includes common tasks such as file I/O, basic DNA
    sequence manipulation, and interacting with V(D)J segment and gene
    annotations.
  * Providing an R interface for interacting with the output of the
    pRESTO and Change-O tool suites.
  * Performing lineage reconstruction on clonal populations of Ig
    sequences and analyzing the topology of the resultant lineage trees.
  * Performing clonal abundance and diversity analysis on lymphocyte
    repertoires.
  * Performing physicochemical property analyses of lymphocyte receptor
    sequences.

r-cran-alakazam-dbgsym: debug symbols for r-cran-alakazam