Ubuntu
r-cran-alakazam package

r-cran-alakazam 1.1.0-1 source package in Ubuntu

Changelog

r-cran-alakazam (1.1.0-1) unstable; urgency=medium

  * New upstream version
  * Standards-Version: 4.5.1 (routine-update)

 -- Steffen Moeller <email address hidden>  Mon, 15 Feb 2021 15:58:30 +0100

Upload details

Uploaded by:
Debian R Packages Maintainers
Uploaded to:
Sid
Original maintainer:
Debian R Packages Maintainers
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
r-cran-alakazam_1.1.0-1.dsc 2.4 KiB 72fccac9c18dace839daebf2d74f424d5c6dd1deb1321129ce01d1e88c6fb40a
r-cran-alakazam_1.1.0.orig.tar.gz 2.4 MiB 0099e61ccbddb1c217e8bb16fd7535a1366f68ef62b5f5542f2d752f7858c347
r-cran-alakazam_1.1.0-1.debian.tar.xz 13.6 KiB 38a0073d0d1e999ad73f9e3b212ba70e632b353e8458c075dfe8321f592d3fda

Available diffs

No changes file available.

Binary packages built by this source

r-cran-alakazam: Immunoglobulin Clonal Lineage and Diversity Analysis

 Alakazam is part of the Immcantation analysis framework for Adaptive
 Immune Receptor Repertoire sequencing (AIRR-seq) and provides a set of
 tools to investigate lymphocyte receptor clonal lineages, diversity,
 gene usage, and other repertoire level properties, with a focus on
 high-throughput immunoglobulin (Ig) sequencing.
 .
 Alakazam serves five main purposes:
  * Providing core functionality for other R packages in the Immcantation
    framework. This includes common tasks such as file I/O, basic DNA
    sequence manipulation, and interacting with V(D)J segment and gene
    annotations.
  * Providing an R interface for interacting with the output of the
    pRESTO and Change-O tool suites.
  * Performing lineage reconstruction on clonal populations of Ig
    sequences and analyzing the topology of the resultant lineage trees.
  * Performing clonal abundance and diversity analysis on lymphocyte
    repertoires.
  * Performing physicochemical property analyses of lymphocyte receptor
    sequences.

r-cran-alakazam-dbgsym: No summary available for r-cran-alakazam-dbgsym in ubuntu impish.

No description available for r-cran-alakazam-dbgsym in ubuntu impish.