r-cran-alakazam 0.3.0-1build1 source package in Ubuntu
Changelog
r-cran-alakazam (0.3.0-1build1) focal; urgency=medium * No-change rebuild for libgcc-s1 package name change. -- Matthias Klose <email address hidden> Tue, 24 Mar 2020 15:01:04 +0100
Upload details
- Uploaded by:
- Matthias Klose
- Uploaded to:
- Focal
- Original maintainer:
- Debian R Packages Maintainers
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Focal | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
r-cran-alakazam_0.3.0.orig.tar.gz | 1.4 MiB | 6f891805fdbaad0789358b55d65ed83e3a480813a67fe7878c575e554eadeac9 |
r-cran-alakazam_0.3.0-1build1.debian.tar.xz | 7.3 KiB | b3fed3de86c505257e5d074c09af34026c552fa895a0a50be889b16ce8a91d7e |
r-cran-alakazam_0.3.0-1build1.dsc | 2.3 KiB | d492be9f728fca2c00a1552bd31f32efb40515a17fdb61e5086828f14c0fe9f6 |
Available diffs
- diff from 0.3.0-1 (in Debian) to 0.3.0-1build1 (326 bytes)
Binary packages built by this source
- r-cran-alakazam: Immunoglobulin Clonal Lineage and Diversity Analysis
Alakazam is part of the Immcantation analysis framework for Adaptive
Immune Receptor Repertoire sequencing (AIRR-seq) and provides a set of
tools to investigate lymphocyte receptor clonal lineages, diversity,
gene usage, and other repertoire level properties, with a focus on
high-throughput immunoglobulin (Ig) sequencing.
.
Alakazam serves five main purposes:
* Providing core functionality for other R packages in the Immcantation
framework. This includes common tasks such as file I/O, basic DNA
sequence manipulation, and interacting with V(D)J segment and gene
annotations.
* Providing an R interface for interacting with the output of the
pRESTO and Change-O tool suites.
* Performing lineage reconstruction on clonal populations of Ig
sequences and analyzing the topology of the resultant lineage trees.
* Performing clonal abundance and diversity analysis on lymphocyte
repertoires.
* Performing physicochemical property analyses of lymphocyte receptor
sequences.
- r-cran-alakazam-dbgsym: debug symbols for r-cran-alakazam