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r-bioc-ensembldb package

r-bioc-ensembldb 2.2.0-2 source package in Ubuntu

Changelog

r-bioc-ensembldb (2.2.0-2) unstable; urgency=medium

  * Upstream switched from unittests to testthat but now even testthat.R
    importet dataset EnsDb.Hsapiens.v75 which is not packaged.  So switch
    back to basic `Testsuite: autopkgtest-pkg-r` for autopkgtest
    Closes: #882355

 -- Andreas Tille <email address hidden>  Sun, 03 Dec 2017 09:33:19 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Builds

Bionic: [FULLYBUILT] amd64

Downloads

File Size SHA-256 Checksum
r-bioc-ensembldb_2.2.0-2.dsc 2.1 KiB e3c9ca454781ac03741acaaa5fce35a4a13ca013b49af16d4e2e6dca0b1f9e76
r-bioc-ensembldb_2.2.0.orig.tar.gz 2.7 MiB a192b5656f7bfcdf96b78268c4aed8db7e3a926521695a17384716cd876214f0
r-bioc-ensembldb_2.2.0-2.debian.tar.xz 4.1 KiB 25dc6514b7cf03d83f31876991ed64829e2aca2d576c738e9c56f37b88c07226

Available diffs

No changes file available.

Binary packages built by this source

r-bioc-ensembldb: GNU R utilities to create and use an Ensembl based annotation database

 The package provides functions to create and use transcript centric
 annotation databases/packages. The annotation for the databases are
 directly fetched from Ensembl using their Perl API. The functionality
 and data is similar to that of the TxDb packages from the
 GenomicFeatures package, but, in addition to retrieve all
 gene/transcript models and annotations from the database, the ensembldb
 package provides also a filter framework allowing to retrieve
 annotations for specific entries like genes encoded on a chromosome
 region or transcript models of lincRNA genes.