r-bioc-dada2 1.28.0+dfsg-1 source package in Ubuntu


r-bioc-dada2 (1.28.0+dfsg-1) unstable; urgency=medium

  * Team upload.
  * New upstream version
  * Standards-Version: 4.6.2 (routine-update)
  * Set upstream metadata fields: Repository-Browse.
  * Lintian-overrides for custom-library-search-path

 -- Andreas Tille <email address hidden>  Thu, 27 Jul 2023 06:30:32 +0200

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Debian R Packages Maintainers
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Original maintainer:
Debian R Packages Maintainers
Medium Urgency

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Series Pocket Published Component Section
Mantic release universe misc


Mantic: [FULLYBUILT] amd64


File Size SHA-256 Checksum
r-bioc-dada2_1.28.0+dfsg-1.dsc 2.2 KiB 82e1f66fcd26d2d7c4a332e6364fe3cd7cfe130c69a1c4b752c7565d21246c80
r-bioc-dada2_1.28.0+dfsg.orig.tar.xz 2.1 MiB a1b3588c864427ab8cdd591883554858fec61d9b72fb86016a171798c47d5fda
r-bioc-dada2_1.28.0+dfsg-1.debian.tar.xz 3.4 KiB 7e64c0069e92540c820901603091995001c67f8a98ba2fa0f6a2f5c3bfaf6bfa

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Binary packages built by this source

r-bioc-dada2: sample inference from amplicon sequencing data

 The dada2 package contributes to software workflows to interpret
 sequencing data from microbiota - the relative abundance of
 bacterial and/or yeast, typically measured in the gut.
 It infers exact amplicon sequence
 variants (ASVs) from high-throughput amplicon sequencing data,
 replacing the coarser and less accurate OTU clustering approach.
 The dada2 pipeline takes as input demultiplexed fastq files, and
 outputs the sequence variants and their sample-wise abundances
 after removing substitution and chimera errors. Taxonomic
 classification is available via a native implementation of the RDP
 naive Bayesian classifier, and species-level assignment to 16S
 rRNA gene fragments by exact matching.

r-bioc-dada2-dbgsym: debug symbols for r-bioc-dada2