r-bioc-dada2 1.24.0+dfsg-1build1 source package in Ubuntu
Changelog
r-bioc-dada2 (1.24.0+dfsg-1build1) kinetic; urgency=medium * No-change rebuild against r-cran-rcppparallel / onetbb -- Graham Inggs <email address hidden> Mon, 05 Sep 2022 07:24:56 +0000
Upload details
- Uploaded by:
- Graham Inggs
- Uploaded to:
- Kinetic
- Original maintainer:
- Debian R Packages Maintainers
- Architectures:
- any-amd64
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| r-bioc-dada2_1.24.0+dfsg.orig.tar.xz | 2.1 MiB | 8fde0c0268d5f579a27030f710def8eb15d21ab59b0319ca5ffbf006cd1fd43c |
| r-bioc-dada2_1.24.0+dfsg-1build1.debian.tar.xz | 3.4 KiB | ba834bb066b26c4fac455e0d423d6c36a31359a714f3bc1fa1bdca098ba92461 |
| r-bioc-dada2_1.24.0+dfsg-1build1.dsc | 2.2 KiB | 56952ba9dba59a67a99e14d9188d168985b05f13bfb7e6e0adac4997901fd659 |
Available diffs
Binary packages built by this source
- r-bioc-dada2: sample inference from amplicon sequencing data
The dada2 package contributes to software workflows to interpret
sequencing data from microbiota - the relative abundance of
bacterial and/or yeast, typically measured in the gut.
It infers exact amplicon sequence
variants (ASVs) from high-throughput amplicon sequencing data,
replacing the coarser and less accurate OTU clustering approach.
The dada2 pipeline takes as input demultiplexed fastq files, and
outputs the sequence variants and their sample-wise abundances
after removing substitution and chimera errors. Taxonomic
classification is available via a native implementation of the RDP
naive Bayesian classifier, and species-level assignment to 16S
rRNA gene fragments by exact matching.
- r-bioc-dada2-dbgsym: No summary available for r-bioc-dada2-dbgsym in ubuntu kinetic.
No description available for r-bioc-dada2-dbgsym in ubuntu kinetic.
