https://launchpad.net/ubuntu/+source/r-bioc-biobase/2.44.0-1/+build/17217883
RUN: /usr/share/launchpad-buildd/bin/builder-prep 
Kernel version: Linux bos02-arm64-008 4.4.0-154-generic #181-Ubuntu SMP Tue Jun 25 05:31:08 UTC 2019 aarch64
Buildd toolchain package versions: launchpad-buildd_176 python-lpbuildd_176 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2.
Syncing the system clock with the buildd NTP service...
 3 Jul 17:10:49 ntpdate[1933]: adjust time server 10.211.37.1 offset -0.351111 sec
RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-17217883 --image-type chroot /home/buildd/filecache-default/a8e076447bc9c859868a26138221e631724b6c90
Creating target for build PACKAGEBUILD-17217883
RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-17217883
Starting target for build PACKAGEBUILD-17217883
RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-17217883 'deb http://ftpmaster.internal/ubuntu eoan main universe' 'deb http://ftpmaster.internal/ubuntu eoan-security main universe' 'deb http://ftpmaster.internal/ubuntu eoan-updates main universe' 'deb http://ftpmaster.internal/ubuntu eoan-proposed main universe'
Overriding sources.list in build-PACKAGEBUILD-17217883
RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=eoan --arch=armhf PACKAGEBUILD-17217883
Updating target for build PACKAGEBUILD-17217883
Get:1 http://ftpmaster.internal/ubuntu eoan InRelease [255 kB]
Get:2 http://ftpmaster.internal/ubuntu eoan-security InRelease [79.7 kB]
Get:3 http://ftpmaster.internal/ubuntu eoan-updates InRelease [79.7 kB]
Get:4 http://ftpmaster.internal/ubuntu eoan-proposed InRelease [106 kB]
Get:5 http://ftpmaster.internal/ubuntu eoan/main armhf Packages [937 kB]
Get:6 http://ftpmaster.internal/ubuntu eoan/main Translation-en [503 kB]
Get:7 http://ftpmaster.internal/ubuntu eoan/universe armhf Packages [8731 kB]
Get:8 http://ftpmaster.internal/ubuntu eoan/universe Translation-en [5285 kB]
Get:9 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf Packages [78.1 kB]
Get:10 http://ftpmaster.internal/ubuntu eoan-proposed/main Translation-en [42.6 kB]
Get:11 http://ftpmaster.internal/ubuntu eoan-proposed/universe armhf Packages [165 kB]
Get:12 http://ftpmaster.internal/ubuntu eoan-proposed/universe Translation-en [95.3 kB]
Fetched 16.4 MB in 9s (1870 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages were automatically installed and are no longer required:
  libapt-pkg5.0 libisl19 libjson-c3 libreadline7
Use 'sudo apt autoremove' to remove them.
The following NEW packages will be installed:
  gcc-9-base libapt-pkg5.90 libisl21 libjson-c4 libpcre2-8-0 libreadline8
The following packages will be upgraded:
  adduser advancecomp apt base-files base-passwd bash binutils
  binutils-arm-linux-gnueabihf binutils-common bsdutils build-essential bzip2
  ca-certificates coreutils cpp cpp-8 dash debconf debianutils diffutils
  dmsetup dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++ g++-8 gcc gcc-8
  gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers
  libacl1 libapparmor1 libargon2-1 libasan5 libassuan0 libatomic1 libattr1
  libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin
  libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2
  libcomerr2 libcryptsetup12 libdb5.3 libdebconfclient0 libdevmapper1.02.1
  libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgcrypt20
  libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libhogweed4
  libidn11 libjson-c3 libkmod2 liblz4-1 liblzma5 libmount1 libmpfr6
  libncurses6 libncursesw6 libnettle6 libp11-kit0 libpam-modules
  libpam-modules-bin libpam-runtime libpam0g libpcre3 libperl5.28 libpng16-16
  libprocps7 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1
  libslang2 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-8-dev
  libstdc++6 libsystemd0 libtinfo6 libubsan1 libudev1 libunistring2 libuuid1
  libzstd1 linux-libc-dev login lsb-base mount multiarch-support ncurses-base
  ncurses-bin openssl optipng passwd patch perl perl-base perl-modules-5.28
  pinentry-curses pkgbinarymangler procps readline-common sed systemd
  systemd-sysv sysvinit-utils tar tzdata util-linux xz-utils zlib1g
142 upgraded, 6 newly installed, 0 to remove and 0 not upgraded.
Need to get 66.4 MB of archives.
After this operation, 11.6 MB of additional disk space will be used.
Get:1 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libc6-dev armhf 2.29-0ubuntu3 [1911 kB]
Get:2 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libc-dev-bin armhf 2.29-0ubuntu3 [59.3 kB]
Get:3 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf linux-libc-dev armhf 5.0.0-20.21 [1021 kB]
Get:4 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libc6 armhf 2.29-0ubuntu3 [2132 kB]
Get:5 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libc-bin armhf 2.29-0ubuntu3 [471 kB]
Get:6 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf gcc-9-base armhf 9.1.0-5ubuntu1 [18.1 kB]
Get:7 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libgcc1 armhf 1:9.1.0-5ubuntu1 [37.4 kB]
Get:8 http://ftpmaster.internal/ubuntu eoan/main armhf base-files armhf 10.2ubuntu3 [60.1 kB]
Get:9 http://ftpmaster.internal/ubuntu eoan/main armhf debianutils armhf 4.8.6.1 [84.2 kB]
Get:10 http://ftpmaster.internal/ubuntu eoan/main armhf bash armhf 5.0-4ubuntu1 [572 kB]
Get:11 http://ftpmaster.internal/ubuntu eoan/main armhf bsdutils armhf 1:2.33.1-0.1ubuntu2 [58.1 kB]
Get:12 http://ftpmaster.internal/ubuntu eoan/main armhf coreutils armhf 8.30-3ubuntu1 [1125 kB]
Get:13 http://ftpmaster.internal/ubuntu eoan/main armhf lsb-base all 10.2019051400ubuntu1 [12.4 kB]
Get:14 http://ftpmaster.internal/ubuntu eoan/main armhf tar armhf 1.30+dfsg-6 [219 kB]
Get:15 http://ftpmaster.internal/ubuntu eoan/main armhf dpkg armhf 1.19.6ubuntu1 [1085 kB]
Get:16 http://ftpmaster.internal/ubuntu eoan/main armhf libperl5.28 armhf 5.28.1-6 [3163 kB]
Get:17 http://ftpmaster.internal/ubuntu eoan/main armhf perl armhf 5.28.1-6 [204 kB]
Get:18 http://ftpmaster.internal/ubuntu eoan/main armhf perl-base armhf 5.28.1-6 [1398 kB]
Get:19 http://ftpmaster.internal/ubuntu eoan/main armhf perl-modules-5.28 all 5.28.1-6 [2818 kB]
Get:20 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf bzip2 armhf 1.0.6-9.1 [32.0 kB]
Get:21 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libbz2-1.0 armhf 1.0.6-9.1 [30.7 kB]
Get:22 http://ftpmaster.internal/ubuntu eoan/main armhf libdb5.3 armhf 5.3.28+dfsg1-0.6ubuntu1 [590 kB]
Get:23 http://ftpmaster.internal/ubuntu eoan/main armhf libgdbm6 armhf 1.18.1-4 [24.4 kB]
Get:24 http://ftpmaster.internal/ubuntu eoan/main armhf libgdbm-compat4 armhf 1.18.1-4 [5788 B]
Get:25 http://ftpmaster.internal/ubuntu eoan/main armhf zlib1g armhf 1:1.2.11.dfsg-1ubuntu2 [48.3 kB]
Get:26 http://ftpmaster.internal/ubuntu eoan/main armhf debconf all 1.5.72 [122 kB]
Get:27 http://ftpmaster.internal/ubuntu eoan/main armhf dash armhf 0.5.10.2-5 [78.3 kB]
Get:28 http://ftpmaster.internal/ubuntu eoan/main armhf diffutils armhf 1:3.7-3 [180 kB]
Get:29 http://ftpmaster.internal/ubuntu eoan/main armhf findutils armhf 4.6.0+git+20190209-2 [307 kB]
Get:30 http://ftpmaster.internal/ubuntu eoan/main armhf grep armhf 3.3-1 [138 kB]
Get:31 http://ftpmaster.internal/ubuntu eoan/main armhf gzip armhf 1.10-0ubuntu1 [90.3 kB]
Get:32 http://ftpmaster.internal/ubuntu eoan/main armhf libsmartcols1 armhf 2.33.1-0.1ubuntu2 [80.7 kB]
Get:33 http://ftpmaster.internal/ubuntu eoan/main armhf libuuid1 armhf 2.33.1-0.1ubuntu2 [20.2 kB]
Get:34 http://ftpmaster.internal/ubuntu eoan/main armhf libblkid1 armhf 2.33.1-0.1ubuntu2 [119 kB]
Get:35 http://ftpmaster.internal/ubuntu eoan/main armhf libfdisk1 armhf 2.33.1-0.1ubuntu2 [159 kB]
Get:36 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre2-8-0 armhf 10.32-5 [158 kB]
Get:37 http://ftpmaster.internal/ubuntu eoan/main armhf libselinux1 armhf 2.9-1 [59.7 kB]
Get:38 http://ftpmaster.internal/ubuntu eoan/main armhf libmount1 armhf 2.33.1-0.1ubuntu2 [130 kB]
Get:39 http://ftpmaster.internal/ubuntu eoan/main armhf libncurses6 armhf 6.1+20181013-2ubuntu2 [79.0 kB]
Get:40 http://ftpmaster.internal/ubuntu eoan/main armhf libtinfo6 armhf 6.1+20181013-2ubuntu2 [70.7 kB]
Get:41 http://ftpmaster.internal/ubuntu eoan/main armhf libncursesw6 armhf 6.1+20181013-2ubuntu2 [105 kB]
Get:42 http://ftpmaster.internal/ubuntu eoan/main armhf fdisk armhf 2.33.1-0.1ubuntu2 [106 kB]
Get:43 http://ftpmaster.internal/ubuntu eoan/main armhf login armhf 1:4.5-1.1ubuntu2 [261 kB]
Get:44 http://ftpmaster.internal/ubuntu eoan/main armhf util-linux armhf 2.33.1-0.1ubuntu2 [925 kB]
Get:45 http://ftpmaster.internal/ubuntu eoan/main armhf ncurses-bin armhf 6.1+20181013-2ubuntu2 [156 kB]
Get:46 http://ftpmaster.internal/ubuntu eoan/main armhf sed armhf 4.7-1 [181 kB]
Get:47 http://ftpmaster.internal/ubuntu eoan/main armhf libdebconfclient0 armhf 0.249ubuntu1 [5868 B]
Get:48 http://ftpmaster.internal/ubuntu eoan/main armhf base-passwd armhf 3.5.46 [45.9 kB]
Get:49 http://ftpmaster.internal/ubuntu eoan/main armhf init-system-helpers all 1.57 [38.3 kB]
Get:50 http://ftpmaster.internal/ubuntu eoan/main armhf ncurses-base all 6.1+20181013-2ubuntu2 [17.9 kB]
Get:51 http://ftpmaster.internal/ubuntu eoan/main armhf sysvinit-utils armhf 2.93-8ubuntu1 [17.9 kB]
Get:52 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf liblz4-1 armhf 1.9.1-1 [51.2 kB]
Get:53 http://ftpmaster.internal/ubuntu eoan/main armhf liblzma5 armhf 5.2.4-1 [84.6 kB]
Get:54 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libstdc++6 armhf 9.1.0-5ubuntu1 [450 kB]
Get:55 http://ftpmaster.internal/ubuntu eoan/main armhf libnettle6 armhf 3.4.1-1 [123 kB]
Get:56 http://ftpmaster.internal/ubuntu eoan/main armhf libhogweed4 armhf 3.4.1-1 [129 kB]
Get:57 http://ftpmaster.internal/ubuntu eoan/main armhf libp11-kit0 armhf 0.23.15-2 [163 kB]
Get:58 http://ftpmaster.internal/ubuntu eoan/main armhf libunistring2 armhf 0.9.10-1ubuntu2 [357 kB]
Get:59 http://ftpmaster.internal/ubuntu eoan/main armhf libgnutls30 armhf 3.6.7-4ubuntu1 [712 kB]
Get:60 http://ftpmaster.internal/ubuntu eoan/main armhf systemd-sysv armhf 240-6ubuntu9 [9380 B]
Get:61 http://ftpmaster.internal/ubuntu eoan/main armhf libacl1 armhf 2.2.53-4 [15.8 kB]
Get:62 http://ftpmaster.internal/ubuntu eoan/main armhf libapparmor1 armhf 2.13.2-9ubuntu7 [29.4 kB]
Get:63 http://ftpmaster.internal/ubuntu eoan/main armhf libaudit-common all 1:2.8.4-3ubuntu1 [4200 B]
Get:64 http://ftpmaster.internal/ubuntu eoan/main armhf libcap-ng0 armhf 0.7.9-2 [9656 B]
Get:65 http://ftpmaster.internal/ubuntu eoan/main armhf libaudit1 armhf 1:2.8.4-3ubuntu1 [35.7 kB]
Get:66 http://ftpmaster.internal/ubuntu eoan/main armhf libcap2 armhf 1:2.25-2 [12.1 kB]
Get:67 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libjson-c4 armhf 0.13.1+dfsg-2 [25.1 kB]
Get:68 http://ftpmaster.internal/ubuntu eoan/main armhf libargon2-1 armhf 0~20171227-0.2 [20.0 kB]
Get:69 http://ftpmaster.internal/ubuntu eoan/main armhf libudev1 armhf 240-6ubuntu9 [57.8 kB]
Get:70 http://ftpmaster.internal/ubuntu eoan/main armhf libdevmapper1.02.1 armhf 2:1.02.155-2ubuntu4 [117 kB]
Get:71 http://ftpmaster.internal/ubuntu eoan/main armhf libssl1.1 armhf 1.1.1c-1ubuntu3 [1070 kB]
Get:72 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libcryptsetup12 armhf 2:2.1.0-5ubuntu2 [129 kB]
Get:73 http://ftpmaster.internal/ubuntu eoan/main armhf libgpg-error0 armhf 1.36-1 [49.4 kB]
Get:74 http://ftpmaster.internal/ubuntu eoan/main armhf libidn11 armhf 1.33-2.2ubuntu2 [43.1 kB]
Get:75 http://ftpmaster.internal/ubuntu eoan/main armhf libkmod2 armhf 26-1ubuntu1 [36.5 kB]
Get:76 http://ftpmaster.internal/ubuntu eoan/main armhf libpam0g armhf 1.3.1-5ubuntu1 [50.5 kB]
Get:77 http://ftpmaster.internal/ubuntu eoan/main armhf libseccomp2 armhf 2.4.1-0ubuntu0.19.10.3 [30.9 kB]
Get:78 http://ftpmaster.internal/ubuntu eoan/main armhf mount armhf 2.33.1-0.1ubuntu2 [105 kB]
Get:79 http://ftpmaster.internal/ubuntu eoan/main armhf libsepol1 armhf 2.9-1 [220 kB]
Get:80 http://ftpmaster.internal/ubuntu eoan/main armhf libsemanage-common all 2.9-1 [9916 B]
Get:81 http://ftpmaster.internal/ubuntu eoan/main armhf libsemanage1 armhf 2.9-1 [72.9 kB]
Get:82 http://ftpmaster.internal/ubuntu eoan/main armhf libpam-modules-bin armhf 1.3.1-5ubuntu1 [33.1 kB]
Get:83 http://ftpmaster.internal/ubuntu eoan/main armhf libpam-modules armhf 1.3.1-5ubuntu1 [230 kB]
Get:84 http://ftpmaster.internal/ubuntu eoan/main armhf passwd armhf 1:4.5-1.1ubuntu2 [768 kB]
Get:85 http://ftpmaster.internal/ubuntu eoan/main armhf adduser all 3.118ubuntu1 [163 kB]
Get:86 http://ftpmaster.internal/ubuntu eoan/main armhf systemd armhf 240-6ubuntu9 [3150 kB]
Get:87 http://ftpmaster.internal/ubuntu eoan/main armhf libsystemd0 armhf 240-6ubuntu9 [221 kB]
Get:88 http://ftpmaster.internal/ubuntu eoan/main armhf libzstd1 armhf 1.3.8+dfsg-3 [195 kB]
Get:89 http://ftpmaster.internal/ubuntu eoan/main armhf libapt-pkg5.90 armhf 1.9.1 [739 kB]
Get:90 http://ftpmaster.internal/ubuntu eoan/main armhf libgcrypt20 armhf 1.8.4-5ubuntu1 [364 kB]
Get:91 http://ftpmaster.internal/ubuntu eoan/main armhf gpgv armhf 2.2.12-1ubuntu3 [167 kB]
Get:92 http://ftpmaster.internal/ubuntu eoan/main armhf apt armhf 1.9.1 [1225 kB]
Get:93 http://ftpmaster.internal/ubuntu eoan/main armhf libext2fs2 armhf 1.45.2-1ubuntu1 [170 kB]
Get:94 http://ftpmaster.internal/ubuntu eoan/main armhf e2fsprogs armhf 1.45.2-1ubuntu1 [513 kB]
Get:95 http://ftpmaster.internal/ubuntu eoan/main armhf init armhf 1.57 [6084 B]
Get:96 http://ftpmaster.internal/ubuntu eoan/main armhf libattr1 armhf 1:2.4.48-4 [11.3 kB]
Get:97 http://ftpmaster.internal/ubuntu eoan/main armhf libpam-runtime all 1.3.1-5ubuntu1 [37.3 kB]
Get:98 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre3 armhf 2:8.39-12 [207 kB]
Get:99 http://ftpmaster.internal/ubuntu eoan/main armhf libcom-err2 armhf 1.45.2-1ubuntu1 [9004 B]
Get:100 http://ftpmaster.internal/ubuntu eoan/main armhf libprocps7 armhf 2:3.3.15-2ubuntu2 [29.8 kB]
Get:101 http://ftpmaster.internal/ubuntu eoan/main armhf libss2 armhf 1.45.2-1ubuntu1 [9296 B]
Get:102 http://ftpmaster.internal/ubuntu eoan/main armhf procps armhf 2:3.3.15-2ubuntu2 [219 kB]
Get:103 http://ftpmaster.internal/ubuntu eoan/main armhf openssl armhf 1.1.1c-1ubuntu3 [595 kB]
Get:104 http://ftpmaster.internal/ubuntu eoan/main armhf ca-certificates all 20190110 [146 kB]
Get:105 http://ftpmaster.internal/ubuntu eoan/main armhf dmsetup armhf 2:1.02.155-2ubuntu4 [74.4 kB]
Get:106 http://ftpmaster.internal/ubuntu eoan/main armhf libjson-c3 armhf 0.12.1+ds-2 [20.2 kB]
Get:107 http://ftpmaster.internal/ubuntu eoan/main armhf readline-common all 8.0-1 [53.4 kB]
Get:108 http://ftpmaster.internal/ubuntu eoan/main armhf libreadline8 armhf 8.0-1 [108 kB]
Get:109 http://ftpmaster.internal/ubuntu eoan/main armhf libslang2 armhf 2.3.2-3 [384 kB]
Get:110 http://ftpmaster.internal/ubuntu eoan/main armhf libsqlite3-0 armhf 3.27.2-3 [453 kB]
Get:111 http://ftpmaster.internal/ubuntu eoan/main armhf tzdata all 2019a-1 [187 kB]
Get:112 http://ftpmaster.internal/ubuntu eoan/main armhf xz-utils armhf 5.2.4-1 [80.6 kB]
Get:113 http://ftpmaster.internal/ubuntu eoan/main armhf libpng16-16 armhf 1.6.37-1 [162 kB]
Get:114 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf multiarch-support armhf 2.29-0ubuntu3 [6920 B]
Get:115 http://ftpmaster.internal/ubuntu eoan/main armhf advancecomp armhf 2.1-2.1 [166 kB]
Get:116 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf binutils-arm-linux-gnueabihf armhf 2.32.51.20190702-1ubuntu1 [2221 kB]
Get:117 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libbinutils armhf 2.32.51.20190702-1ubuntu1 [312 kB]
Get:118 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf binutils armhf 2.32.51.20190702-1ubuntu1 [3352 B]
Get:119 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf binutils-common armhf 2.32.51.20190702-1ubuntu1 [202 kB]
Get:120 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libubsan1 armhf 9.1.0-5ubuntu1 [118 kB]
Get:121 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libgomp1 armhf 9.1.0-5ubuntu1 [77.5 kB]
Get:122 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libatomic1 armhf 9.1.0-5ubuntu1 [7096 B]
Get:123 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libasan5 armhf 9.1.0-5ubuntu1 [387 kB]
Get:124 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf g++-8 armhf 8.3.0-16ubuntu3 [7799 kB]
Get:125 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf gcc-8 armhf 8.3.0-16ubuntu3 [7591 kB]
Get:126 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libstdc++-8-dev armhf 8.3.0-16ubuntu3 [1583 kB]
Get:127 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libgcc-8-dev armhf 8.3.0-16ubuntu3 [630 kB]
Get:128 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libcc1-0 armhf 9.1.0-5ubuntu1 [41.7 kB]
Get:129 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf cpp-8 armhf 8.3.0-16ubuntu3 [6812 kB]
Get:130 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf gcc-8-base armhf 8.3.0-16ubuntu3 [18.5 kB]
Get:131 http://ftpmaster.internal/ubuntu eoan/main armhf libisl21 armhf 0.21-1 [441 kB]
Get:132 http://ftpmaster.internal/ubuntu eoan/main armhf libmpfr6 armhf 4.0.2-1 [196 kB]
Get:133 http://ftpmaster.internal/ubuntu eoan/main armhf g++ armhf 4:8.3.0-1ubuntu3 [1604 B]
Get:134 http://ftpmaster.internal/ubuntu eoan/main armhf gcc armhf 4:8.3.0-1ubuntu3 [5228 B]
Get:135 http://ftpmaster.internal/ubuntu eoan/main armhf cpp armhf 4:8.3.0-1ubuntu3 [27.6 kB]
Get:136 http://ftpmaster.internal/ubuntu eoan/main armhf dpkg-dev all 1.19.6ubuntu1 [675 kB]
Get:137 http://ftpmaster.internal/ubuntu eoan/main armhf libdpkg-perl all 1.19.6ubuntu1 [230 kB]
Get:138 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf patch armhf 2.7.6-4 [101 kB]
Get:139 http://ftpmaster.internal/ubuntu eoan/main armhf build-essential armhf 12.6ubuntu1 [4664 B]
Get:140 http://ftpmaster.internal/ubuntu eoan/main armhf e2fslibs armhf 1.45.2-1ubuntu1 [2716 B]
Get:141 http://ftpmaster.internal/ubuntu eoan/main armhf libassuan0 armhf 2.5.3-1 [29.0 kB]
Get:142 http://ftpmaster.internal/ubuntu eoan/main armhf pinentry-curses armhf 1.1.0-2 [31.3 kB]
Get:143 http://ftpmaster.internal/ubuntu eoan/main armhf gpg armhf 2.2.12-1ubuntu3 [415 kB]
Get:144 http://ftpmaster.internal/ubuntu eoan/main armhf gpgconf armhf 2.2.12-1ubuntu3 [105 kB]
Get:145 http://ftpmaster.internal/ubuntu eoan/main armhf gpg-agent armhf 2.2.12-1ubuntu3 [190 kB]
Get:146 http://ftpmaster.internal/ubuntu eoan/main armhf libcomerr2 armhf 1.45.2-1ubuntu1 [2704 B]
Get:147 http://ftpmaster.internal/ubuntu eoan/main armhf optipng armhf 0.7.7-1 [81.1 kB]
Get:148 http://ftpmaster.internal/ubuntu eoan/main armhf pkgbinarymangler all 144 [55.2 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 66.4 MB in 8s (7993 kB/s)
(Reading database ... 12402 files and directories currently installed.)
Preparing to unpack .../libc6-dev_2.29-0ubuntu3_armhf.deb ...
Unpacking libc6-dev:armhf (2.29-0ubuntu3) over (2.28-0ubuntu1) ...
Preparing to unpack .../libc-dev-bin_2.29-0ubuntu3_armhf.deb ...
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Current default time zone: 'Etc/UTC'
Local time is now:      Wed Jul  3 17:11:54 UTC 2019.
Universal Time is now:  Wed Jul  3 17:11:54 UTC 2019.
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RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-17217883 armhf eoan-proposed -c chroot:build-PACKAGEBUILD-17217883 --arch=armhf --dist=eoan-proposed --nolog r-bioc-biobase_2.44.0-1.dsc
Initiating build PACKAGEBUILD-17217883 with 4 jobs across 4 processor cores.
Kernel reported to sbuild: 4.4.0-154-generic #181-Ubuntu SMP Tue Jun 25 05:31:08 UTC 2019 armv7l
sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-008.buildd

+==============================================================================+
| r-bioc-biobase 2.44.0-1 (armhf)                            03 Jul 2019 17:12 |
+==============================================================================+

Package: r-bioc-biobase
Version: 2.44.0-1
Source Version: 2.44.0-1
Distribution: eoan-proposed
Machine Architecture: arm64
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'build/r-bioc-biobase-SWLH3J/r-bioc-biobase-2.44.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-bioc-biobase-SWLH3J' with '<<BUILDDIR>>'
I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-17217883/chroot-autobuild' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Local sources
-------------

r-bioc-biobase_2.44.0-1.dsc exists in .; copying to chroot

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+------------------------------------------------------------------------------+
| Install core build dependencies (apt-based resolver)                         |
+------------------------------------------------------------------------------+

Installing build dependencies
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The following packages were automatically installed and are no longer required:
  libapt-pkg5.0 libisl19 libjson-c3 libreadline7
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
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Filtered Build-Depends: debhelper (>= 12~), dh-r, r-base-dev, r-bioc-biocgenerics (>= 0.27.1)
dpkg-deb: building package 'sbuild-build-depends-r-bioc-biobase-dummy' in '/<<BUILDDIR>>/resolver-zW_XOk/apt_archive/sbuild-build-depends-r-bioc-biobase-dummy.deb'.
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+------------------------------------------------------------------------------+
| Install r-bioc-biobase build dependencies (apt-based resolver)               |
+------------------------------------------------------------------------------+

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libapt-pkg5.0 libisl19 libjson-c3 libreadline7
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
  dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-8
  groff-base icu-devtools intltool-debian libarchive-zip-perl
  libasn1-8-heimdal libblas-dev libblas3 libbsd0 libbz2-dev libcairo2
  libcroco3 libcurl4 libdatrie1 libelf1 libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-8-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz0b
  libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal
  libhx509-5-heimdal libice6 libicu-dev libicu63 libjbig0 libjpeg-dev
  libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3
  libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev
  liblapack3 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1
  libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3
  libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev
  libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
  libreadline-dev libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db
  libsigsegv2 libsm6 libssh-4 libswitch-perl libtcl8.6 libthai-data libthai0
  libtiff5 libtk8.6 libtool libuchardet0 libwebp6 libwind0-heimdal libx11-6
  libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
  libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db pkg-config
  po-debconf r-base-core r-base-dev r-bioc-biocgenerics ucf unzip x11-common
  xauth xdg-utils zip zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
  vacation debtags dh-make gettext-doc libasprintf-dev libgettextpo-dev
  gfortran-multilib gfortran-doc gfortran-8-multilib gfortran-8-doc
  libgfortran5-dbg libcoarrays-dev groff liblapack-doc krb5-doc krb5-user
  icu-doc liblzma-doc ncurses-doc readline-doc tcl8.6 tk8.6 libtool-doc
  gcj-jdk m4-doc apparmor less www-browser libmail-box-perl elpa-ess
  r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
  texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
  texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
  r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges
  r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2
  r-bioc-annotate
Recommended packages:
  devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
  shared-mime-info xdg-user-dirs krb5-locales libpng-tools publicsuffix
  libsasl2-modules libltdl-dev libmail-sendmail-perl r-recommended r-doc-html
  r-cran-runit libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl
  x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev bsdmainutils dctrl-tools debhelper
  dh-autoreconf dh-r dh-strip-nondeterminism dwz file fontconfig
  fontconfig-config fonts-dejavu-core gettext gettext-base gfortran gfortran-8
  groff-base icu-devtools intltool-debian libarchive-zip-perl
  libasn1-8-heimdal libblas-dev libblas3 libbsd0 libbz2-dev libcairo2
  libcroco3 libcurl4 libdatrie1 libelf1 libexpat1
  libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
  libfreetype6 libfribidi0 libgfortran-8-dev libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libgssapi3-heimdal libharfbuzz0b
  libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal
  libhx509-5-heimdal libice6 libicu-dev libicu63 libjbig0 libjpeg-dev
  libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3
  libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblapack-dev
  liblapack3 libldap-2.4-2 libldap-common liblzma-dev libmagic-mgc libmagic1
  libncurses-dev libncurses5-dev libnghttp2-14 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3
  libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix0 libpcre3-dev
  libpcre32-3 libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpsl5
  libreadline-dev libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db
  libsigsegv2 libsm6 libssh-4 libswitch-perl libtcl8.6 libthai-data libthai0
  libtiff5 libtk8.6 libtool libuchardet0 libwebp6 libwind0-heimdal libx11-6
  libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
  libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 m4 man-db pkg-config
  po-debconf r-base-core r-base-dev r-bioc-biocgenerics
  sbuild-build-depends-r-bioc-biobase-dummy ucf unzip x11-common xauth
  xdg-utils zip zlib1g-dev
0 upgraded, 138 newly installed, 0 to remove and 0 not upgraded.
Need to get 72.4 MB of archives.
After this operation, 201 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-zW_XOk/apt_archive ./ sbuild-build-depends-r-bioc-biobase-dummy 0.invalid.0 [892 B]
Get:2 http://ftpmaster.internal/ubuntu eoan/main armhf libxau6 armhf 1:1.0.8-1 [7324 B]
Get:3 http://ftpmaster.internal/ubuntu eoan/main armhf libbsd0 armhf 0.9.1-2 [48.4 kB]
Get:4 http://ftpmaster.internal/ubuntu eoan/main armhf libxdmcp6 armhf 1:1.1.2-3 [9316 B]
Get:5 http://ftpmaster.internal/ubuntu eoan/main armhf libxcb1 armhf 1.13.1-2 [40.8 kB]
Get:6 http://ftpmaster.internal/ubuntu eoan/main armhf libx11-data all 2:1.6.7-1 [113 kB]
Get:7 http://ftpmaster.internal/ubuntu eoan/main armhf libx11-6 armhf 2:1.6.7-1 [515 kB]
Get:8 http://ftpmaster.internal/ubuntu eoan/main armhf libxext6 armhf 2:1.3.3-1 [25.1 kB]
Get:9 http://ftpmaster.internal/ubuntu eoan/main armhf bsdmainutils armhf 11.1.2ubuntu2 [176 kB]
Get:10 http://ftpmaster.internal/ubuntu eoan/main armhf libuchardet0 armhf 0.0.6-3 [62.1 kB]
Get:11 http://ftpmaster.internal/ubuntu eoan/main armhf groff-base armhf 1.22.4-3 [772 kB]
Get:12 http://ftpmaster.internal/ubuntu eoan/main armhf libpipeline1 armhf 1.5.1-2 [21.6 kB]
Get:13 http://ftpmaster.internal/ubuntu eoan/main armhf man-db armhf 2.8.5-2 [1068 kB]
Get:14 http://ftpmaster.internal/ubuntu eoan/main armhf libmagic-mgc armhf 1:5.35-4 [200 kB]
Get:15 http://ftpmaster.internal/ubuntu eoan/main armhf libmagic1 armhf 1:5.35-4 [66.8 kB]
Get:16 http://ftpmaster.internal/ubuntu eoan/main armhf file armhf 1:5.35-4 [22.0 kB]
Get:17 http://ftpmaster.internal/ubuntu eoan/main armhf libelf1 armhf 0.176-1.1 [40.9 kB]
Get:18 http://ftpmaster.internal/ubuntu eoan/main armhf libexpat1 armhf 2.2.6-2 [60.4 kB]
Get:19 http://ftpmaster.internal/ubuntu eoan/main armhf libfribidi0 armhf 1.0.5-3.1 [24.3 kB]
Get:20 http://ftpmaster.internal/ubuntu eoan/main armhf libglib2.0-0 armhf 2.60.4-1 [1079 kB]
Get:21 http://ftpmaster.internal/ubuntu eoan/main armhf libicu63 armhf 63.2-2 [8002 kB]
Get:22 http://ftpmaster.internal/ubuntu eoan/main armhf libxml2 armhf 2.9.4+dfsg1-7ubuntu3 [533 kB]
Get:23 http://ftpmaster.internal/ubuntu eoan/main armhf ucf all 3.0038+nmu1 [51.6 kB]
Get:24 http://ftpmaster.internal/ubuntu eoan/main armhf gettext-base armhf 0.19.8.1-9 [46.0 kB]
Get:25 http://ftpmaster.internal/ubuntu eoan/main armhf libkrb5support0 armhf 1.17-3 [29.8 kB]
Get:26 http://ftpmaster.internal/ubuntu eoan/main armhf libk5crypto3 armhf 1.17-3 [83.7 kB]
Get:27 http://ftpmaster.internal/ubuntu eoan/main armhf libkeyutils1 armhf 1.6-6 [9028 B]
Get:28 http://ftpmaster.internal/ubuntu eoan/main armhf libkrb5-3 armhf 1.17-3 [286 kB]
Get:29 http://ftpmaster.internal/ubuntu eoan/main armhf libgssapi-krb5-2 armhf 1.17-3 [101 kB]
Get:30 http://ftpmaster.internal/ubuntu eoan/main armhf libpsl5 armhf 0.20.2-2 [48.7 kB]
Get:31 http://ftpmaster.internal/ubuntu eoan/main armhf libxmuu1 armhf 2:1.1.2-2 [9130 B]
Get:32 http://ftpmaster.internal/ubuntu eoan/main armhf xauth armhf 1:1.0.10-1 [21.7 kB]
Get:33 http://ftpmaster.internal/ubuntu eoan/main armhf libsigsegv2 armhf 2.12-2 [13.1 kB]
Get:34 http://ftpmaster.internal/ubuntu eoan/main armhf m4 armhf 1.4.18-2 [186 kB]
Get:35 http://ftpmaster.internal/ubuntu eoan/main armhf autoconf all 2.69-11 [322 kB]
Get:36 http://ftpmaster.internal/ubuntu eoan/main armhf autotools-dev all 20180224.1 [39.6 kB]
Get:37 http://ftpmaster.internal/ubuntu eoan/main armhf automake all 1:1.16.1-4ubuntu3 [522 kB]
Get:38 http://ftpmaster.internal/ubuntu eoan/main armhf autopoint all 0.19.8.1-9 [412 kB]
Get:39 http://ftpmaster.internal/ubuntu eoan/main armhf dctrl-tools armhf 2.24-3 [53.8 kB]
Get:40 http://ftpmaster.internal/ubuntu eoan/main armhf libtool all 2.4.6-10 [194 kB]
Get:41 http://ftpmaster.internal/ubuntu eoan/main armhf dh-autoreconf all 19 [16.1 kB]
Get:42 http://ftpmaster.internal/ubuntu eoan/main armhf libarchive-zip-perl all 1.64-1 [84.9 kB]
Get:43 http://ftpmaster.internal/ubuntu eoan/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [13.7 kB]
Get:44 http://ftpmaster.internal/ubuntu eoan/main armhf dh-strip-nondeterminism all 1.1.2-1 [5208 B]
Get:45 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf dwz armhf 0.12.20190702-1ubuntu1 [74.7 kB]
Get:46 http://ftpmaster.internal/ubuntu eoan/main armhf libcroco3 armhf 0.6.12-3 [69.6 kB]
Get:47 http://ftpmaster.internal/ubuntu eoan/main armhf gettext armhf 0.19.8.1-9 [833 kB]
Get:48 http://ftpmaster.internal/ubuntu eoan/main armhf intltool-debian all 0.35.0+20060710.5 [24.9 kB]
Get:49 http://ftpmaster.internal/ubuntu eoan/main armhf po-debconf all 1.0.21 [233 kB]
Get:50 http://ftpmaster.internal/ubuntu eoan/main armhf debhelper all 12.1.1ubuntu1 [899 kB]
Get:51 http://ftpmaster.internal/ubuntu eoan/main armhf zip armhf 3.0-11build1 [145 kB]
Get:52 http://ftpmaster.internal/ubuntu eoan/main armhf unzip armhf 6.0-23ubuntu1 [153 kB]
Get:53 http://ftpmaster.internal/ubuntu eoan/main armhf libpaper1 armhf 1.1.28 [12.1 kB]
Get:54 http://ftpmaster.internal/ubuntu eoan/main armhf libpaper-utils armhf 1.1.28 [7960 B]
Get:55 http://ftpmaster.internal/ubuntu eoan/main armhf xdg-utils all 1.1.3-1ubuntu2 [60.5 kB]
Get:56 http://ftpmaster.internal/ubuntu eoan/main armhf libblas3 armhf 3.8.0-2 [98.5 kB]
Get:57 http://ftpmaster.internal/ubuntu eoan/main armhf libfreetype6 armhf 2.9.1-3 [278 kB]
Get:58 http://ftpmaster.internal/ubuntu eoan/main armhf fonts-dejavu-core all 2.37-1 [1041 kB]
Get:59 http://ftpmaster.internal/ubuntu eoan/main armhf fontconfig-config all 2.13.1-2ubuntu2 [28.9 kB]
Get:60 http://ftpmaster.internal/ubuntu eoan/main armhf libfontconfig1 armhf 2.13.1-2ubuntu2 [95.8 kB]
Get:61 http://ftpmaster.internal/ubuntu eoan/main armhf libpixman-1-0 armhf 0.36.0-1 [157 kB]
Get:62 http://ftpmaster.internal/ubuntu eoan/main armhf libxcb-render0 armhf 1.13.1-2 [13.9 kB]
Get:63 http://ftpmaster.internal/ubuntu eoan/main armhf libxcb-shm0 armhf 1.13.1-2 [5380 B]
Get:64 http://ftpmaster.internal/ubuntu eoan/main armhf libxrender1 armhf 1:0.9.10-1 [15.6 kB]
Get:65 http://ftpmaster.internal/ubuntu eoan/main armhf libcairo2 armhf 1.16.0-4 [510 kB]
Get:66 http://ftpmaster.internal/ubuntu eoan/main armhf libroken18-heimdal armhf 7.5.0+dfsg-3 [34.3 kB]
Get:67 http://ftpmaster.internal/ubuntu eoan/main armhf libasn1-8-heimdal armhf 7.5.0+dfsg-3 [138 kB]
Get:68 http://ftpmaster.internal/ubuntu eoan/main armhf libheimbase1-heimdal armhf 7.5.0+dfsg-3 [24.2 kB]
Get:69 http://ftpmaster.internal/ubuntu eoan/main armhf libhcrypto4-heimdal armhf 7.5.0+dfsg-3 [76.7 kB]
Get:70 http://ftpmaster.internal/ubuntu eoan/main armhf libwind0-heimdal armhf 7.5.0+dfsg-3 [47.2 kB]
Get:71 http://ftpmaster.internal/ubuntu eoan/main armhf libhx509-5-heimdal armhf 7.5.0+dfsg-3 [87.9 kB]
Get:72 http://ftpmaster.internal/ubuntu eoan/main armhf libkrb5-26-heimdal armhf 7.5.0+dfsg-3 [167 kB]
Get:73 http://ftpmaster.internal/ubuntu eoan/main armhf libheimntlm0-heimdal armhf 7.5.0+dfsg-3 [13.1 kB]
Get:74 http://ftpmaster.internal/ubuntu eoan/main armhf libgssapi3-heimdal armhf 7.5.0+dfsg-3 [78.6 kB]
Get:75 http://ftpmaster.internal/ubuntu eoan/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-1 [13.2 kB]
Get:76 http://ftpmaster.internal/ubuntu eoan/main armhf libsasl2-2 armhf 2.1.27+dfsg-1 [42.2 kB]
Get:77 http://ftpmaster.internal/ubuntu eoan/main armhf libldap-common all 2.4.47+dfsg-3ubuntu2 [16.6 kB]
Get:78 http://ftpmaster.internal/ubuntu eoan/main armhf libldap-2.4-2 armhf 2.4.47+dfsg-3ubuntu2 [132 kB]
Get:79 http://ftpmaster.internal/ubuntu eoan/main armhf libnghttp2-14 armhf 1.37.0-1 [68.7 kB]
Get:80 http://ftpmaster.internal/ubuntu eoan/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [49.2 kB]
Get:81 http://ftpmaster.internal/ubuntu eoan/main armhf libssh-4 armhf 0.8.7-1 [159 kB]
Get:82 http://ftpmaster.internal/ubuntu eoan/main armhf libcurl4 armhf 7.64.0-4ubuntu1 [198 kB]
Get:83 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg-turbo8 armhf 2.0.1-0ubuntu2 [90.0 kB]
Get:84 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg8 armhf 8c-2ubuntu8 [2202 B]
Get:85 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libgfortran5 armhf 9.1.0-5ubuntu1 [252 kB]
Get:86 http://ftpmaster.internal/ubuntu eoan/main armhf liblapack3 armhf 3.8.0-2 [1619 kB]
Get:87 http://ftpmaster.internal/ubuntu eoan/main armhf fontconfig armhf 2.13.1-2ubuntu2 [169 kB]
Get:88 http://ftpmaster.internal/ubuntu eoan/main armhf libthai-data all 0.1.28-2 [134 kB]
Get:89 http://ftpmaster.internal/ubuntu eoan/main armhf libdatrie1 armhf 0.2.12-2 [15.0 kB]
Get:90 http://ftpmaster.internal/ubuntu eoan/main armhf libthai0 armhf 0.1.28-2 [14.7 kB]
Get:91 http://ftpmaster.internal/ubuntu eoan/main armhf libpango-1.0-0 armhf 1.42.4-6 [138 kB]
Get:92 http://ftpmaster.internal/ubuntu eoan/main armhf libgraphite2-3 armhf 1.3.13-7 [62.8 kB]
Get:93 http://ftpmaster.internal/ubuntu eoan/main armhf libharfbuzz0b armhf 2.4.0-1 [332 kB]
Get:94 http://ftpmaster.internal/ubuntu eoan/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [30.0 kB]
Get:95 http://ftpmaster.internal/ubuntu eoan/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [19.5 kB]
Get:96 http://ftpmaster.internal/ubuntu eoan/main armhf libtcl8.6 armhf 8.6.9+dfsg-2 [790 kB]
Get:97 http://ftpmaster.internal/ubuntu eoan/main armhf libjbig0 armhf 2.1-3.1build1 [23.9 kB]
Get:98 http://ftpmaster.internal/ubuntu eoan/main armhf libwebp6 armhf 0.6.1-2 [152 kB]
Get:99 http://ftpmaster.internal/ubuntu eoan/main armhf libtiff5 armhf 4.0.10-4 [139 kB]
Get:100 http://ftpmaster.internal/ubuntu eoan/main armhf libxft2 armhf 2.3.2-2 [31.6 kB]
Get:101 http://ftpmaster.internal/ubuntu eoan/main armhf x11-common all 1:7.7+19ubuntu12 [22.4 kB]
Get:102 http://ftpmaster.internal/ubuntu eoan/main armhf libxss1 armhf 1:1.2.3-1 [7512 B]
Get:103 http://ftpmaster.internal/ubuntu eoan/main armhf libtk8.6 armhf 8.6.9-2 [618 kB]
Get:104 http://ftpmaster.internal/ubuntu eoan/main armhf libice6 armhf 2:1.0.9-2 [33.5 kB]
Get:105 http://ftpmaster.internal/ubuntu eoan/main armhf libsm6 armhf 2:1.2.3-1 [14.1 kB]
Get:106 http://ftpmaster.internal/ubuntu eoan/main armhf libxt6 armhf 1:1.1.5-1 [129 kB]
Get:107 http://ftpmaster.internal/ubuntu eoan-proposed/universe armhf r-base-core armhf 3.6.0.20190628-1ubuntu1 [24.2 MB]
Get:108 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libgfortran-8-dev armhf 8.3.0-16ubuntu3 [271 kB]
Get:109 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf gfortran-8 armhf 8.3.0-16ubuntu3 [7250 kB]
Get:110 http://ftpmaster.internal/ubuntu eoan/main armhf gfortran armhf 4:8.3.0-1ubuntu3 [1364 B]
Get:111 http://ftpmaster.internal/ubuntu eoan/main armhf libblas-dev armhf 3.8.0-2 [105 kB]
Get:112 http://ftpmaster.internal/ubuntu eoan/main armhf liblapack-dev armhf 3.8.0-2 [1667 kB]
Get:113 http://ftpmaster.internal/ubuntu eoan/main armhf libncurses-dev armhf 6.1+20181013-2ubuntu2 [295 kB]
Get:114 http://ftpmaster.internal/ubuntu eoan/main armhf libncurses5-dev armhf 6.1+20181013-2ubuntu2 [992 B]
Get:115 http://ftpmaster.internal/ubuntu eoan/main armhf libreadline-dev armhf 8.0-1 [127 kB]
Get:116 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg-turbo8-dev armhf 2.0.1-0ubuntu2 [203 kB]
Get:117 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg8-dev armhf 8c-2ubuntu8 [1554 B]
Get:118 http://ftpmaster.internal/ubuntu eoan/main armhf libjpeg-dev armhf 8c-2ubuntu8 [1554 B]
Get:119 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre2-16-0 armhf 10.32-5 [146 kB]
Get:120 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre2-32-0 armhf 10.32-5 [140 kB]
Get:121 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre2-posix0 armhf 10.32-5 [5192 B]
Get:122 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre2-dev armhf 10.32-5 [557 kB]
Get:123 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre16-3 armhf 2:8.39-12 [128 kB]
Get:124 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre32-3 armhf 2:8.39-12 [120 kB]
Get:125 http://ftpmaster.internal/ubuntu eoan/main armhf libpcrecpp0v5 armhf 2:8.39-12 [13.1 kB]
Get:126 http://ftpmaster.internal/ubuntu eoan/main armhf libpcre3-dev armhf 2:8.39-12 [474 kB]
Get:127 http://ftpmaster.internal/ubuntu eoan/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1ubuntu2 [166 kB]
Get:128 http://ftpmaster.internal/ubuntu eoan/main armhf libpng-dev armhf 1.6.37-1 [160 kB]
Get:129 http://ftpmaster.internal/ubuntu eoan-proposed/main armhf libbz2-dev armhf 1.0.6-9.1 [28.9 kB]
Get:130 http://ftpmaster.internal/ubuntu eoan/main armhf liblzma-dev armhf 5.2.4-1 [139 kB]
Get:131 http://ftpmaster.internal/ubuntu eoan/main armhf icu-devtools armhf 63.2-2 [160 kB]
Get:132 http://ftpmaster.internal/ubuntu eoan/main armhf libicu-dev armhf 63.2-2 [8927 kB]
Get:133 http://ftpmaster.internal/ubuntu eoan/main armhf pkg-config armhf 0.29.1-0ubuntu3 [42.2 kB]
Get:134 http://ftpmaster.internal/ubuntu eoan-proposed/universe armhf r-base-dev all 3.6.0.20190628-1ubuntu1 [4528 B]
Get:135 http://ftpmaster.internal/ubuntu eoan/main armhf libfile-which-perl all 1.23-1 [13.8 kB]
Get:136 http://ftpmaster.internal/ubuntu eoan/universe armhf libswitch-perl all 2.17-2 [18.8 kB]
Get:137 http://ftpmaster.internal/ubuntu eoan/universe armhf dh-r all 20190121 [32.0 kB]
Get:138 http://ftpmaster.internal/ubuntu eoan/universe armhf r-bioc-biocgenerics all 0.28.0-2 [644 kB]
debconf: delaying package configuration, since apt-utils is not installed
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Setting up libexpat1:armhf (2.2.6-2) ...
Setting up libpcrecpp0v5:armhf (2:8.39-12) ...
Setting up libpipeline1:armhf (1.5.1-2) ...
Setting up libgraphite2-3:armhf (1.3.13-7) ...
Setting up libpixman-1-0:armhf (0.36.0-1) ...
Setting up libfile-which-perl (1.23-1) ...
Setting up libxau6:armhf (1:1.0.8-1) ...
Setting up libkeyutils1:armhf (1.6-6) ...
Setting up libncurses-dev:armhf (6.1+20181013-2ubuntu2) ...
Setting up libpsl5:armhf (0.20.2-2) ...
Setting up libpcre16-3:armhf (2:8.39-12) ...
Setting up libdatrie1:armhf (0.2.12-2) ...
Setting up libmagic-mgc (1:5.35-4) ...
Setting up libarchive-zip-perl (1.64-1) ...
Setting up libglib2.0-0:armhf (2.60.4-1) ...
No schema files found: doing nothing.
Setting up unzip (6.0-23ubuntu1) ...
Setting up x11-common (1:7.7+19ubuntu12) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libnghttp2-14:armhf (1.37.0-1) ...
Setting up libmagic1:armhf (1:5.35-4) ...
Setting up gettext-base (0.19.8.1-9) ...
Setting up file (1:5.35-4) ...
Setting up libreadline-dev:armhf (8.0-1) ...
Setting up libldap-common (2.4.47+dfsg-3ubuntu2) ...
Setting up libjbig0:armhf (2.1-3.1build1) ...
Setting up libpcre2-16-0:armhf (10.32-5) ...
Setting up libicu63:armhf (63.2-2) ...
Setting up libkrb5support0:armhf (1.17-3) ...
Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-1) ...
Setting up zip (3.0-11build1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libpcre2-32-0:armhf (10.32-5) ...
Setting up libblas3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libpcre2-posix0:armhf (10.32-5) ...
Setting up libswitch-perl (2.17-2) ...
Setting up libfreetype6:armhf (2.9.1-3) ...
Setting up libx11-data (2:1.6.7-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libfribidi0:armhf (1.0.5-3.1) ...
Setting up libpcre32-3:armhf (2:8.39-12) ...
Setting up libtcl8.6:armhf (8.6.9+dfsg-2) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (63.2-2) ...
Setting up pkg-config (0.29.1-0ubuntu3) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up ucf (3.0038+nmu1) ...
Setting up libk5crypto3:armhf (1.17-3) ...
Setting up libjpeg-turbo8:armhf (2.0.1-0ubuntu2) ...
Setting up libsasl2-2:armhf (2.1.27+dfsg-1) ...
Setting up libgfortran5:armhf (9.1.0-5ubuntu1) ...
Setting up libroken18-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up liblzma-dev:armhf (5.2.4-1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1ubuntu2) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libncurses5-dev:armhf (6.1+20181013-2ubuntu2) ...
Setting up libharfbuzz0b:armhf (2.4.0-1) ...
Setting up libthai-data (0.1.28-2) ...
Setting up libkrb5-3:armhf (1.17-3) ...
Setting up libbsd0:armhf (0.9.1-2) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libicu-dev:armhf (63.2-2) ...
Setting up libxml2:armhf (2.9.4+dfsg1-7ubuntu3) ...
Setting up xdg-utils (1.1.3-1ubuntu2) ...
Setting up libblas-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up dctrl-tools (2.24-3) ...
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Setting up libbz2-dev:armhf (1.0.6-9.1) ...
Setting up libjpeg8:armhf (8c-2ubuntu8) ...
Setting up libfile-stripnondeterminism-perl (1.1.2-1) ...
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Setting up libpaper1:armhf (1.1.28) ...

Creating config file /etc/papersize with new version
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Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libpcre2-dev:armhf (10.32-5) ...
Setting up libtool (2.4.6-10) ...
Setting up libxcb-render0:armhf (1.13.1-2) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up fontconfig-config (2.13.1-2ubuntu2) ...
Setting up gfortran-8 (8.3.0-16ubuntu3) ...
Setting up libasn1-8-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up libpng-dev:armhf (1.6.37-1) ...
Setting up m4 (1.4.18-2) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libhcrypto4-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up gfortran (4:8.3.0-1ubuntu3) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libthai0:armhf (0.1.28-2) ...
Setting up libwind0-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up bsdmainutils (11.1.2ubuntu2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up liblapack-dev:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-3) ...
Setting up libcroco3:armhf (0.6.12-3) ...
Setting up libssh-4:armhf (0.8.7-1) ...
Setting up autoconf (2.69-11) ...
Setting up dwz (0.12.20190702-1ubuntu1) ...
Setting up groff-base (1.22.4-3) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up libtiff5:armhf (4.0.10-4) ...
Setting up libfontconfig1:armhf (2.13.1-2ubuntu2) ...
Setting up libjpeg8-dev:armhf (8c-2ubuntu8) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2) ...
Setting up automake (1:1.16.1-4ubuntu3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up fontconfig (2.13.1-2ubuntu2) ...
Regenerating fonts cache... done.
Setting up gettext (0.19.8.1-9) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libhx509-5-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up libpango-1.0-0:armhf (1.42.4-6) ...
Setting up libjpeg-dev:armhf (8c-2ubuntu8) ...
Setting up libxext6:armhf (2:1.3.3-1) ...
Setting up man-db (2.8.5-2) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer.
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ...
Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ...
Setting up libkrb5-26-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up libxft2:armhf (2.3.2-2) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.9-2) ...
Setting up libheimntlm0-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up libgssapi3-heimdal:armhf (7.5.0+dfsg-3) ...
Setting up libldap-2.4-2:armhf (2.4.47+dfsg-3ubuntu2) ...
Setting up libcurl4:armhf (7.64.0-4ubuntu1) ...
Setting up r-base-core (3.6.0.20190628-1ubuntu1) ...

Creating config file /etc/R/Renviron with new version
Setting up r-bioc-biocgenerics (0.28.0-2) ...
Setting up r-base-dev (3.6.0.20190628-1ubuntu1) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (12.1.1ubuntu1) ...
Setting up dh-strip-nondeterminism (1.1.2-1) ...
Setting up dh-r (20190121) ...
Setting up sbuild-build-depends-r-bioc-biobase-dummy (0.invalid.0) ...
Processing triggers for systemd (240-6ubuntu9) ...
Processing triggers for libc-bin (2.29-0ubuntu3) ...

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-154-generic arm64 (armv7l)
Toolchain package versions: binutils_2.32.51.20190702-1ubuntu1 dpkg-dev_1.19.6ubuntu1 g++-8_8.3.0-16ubuntu3 gcc-8_8.3.0-16ubuntu3 libc6-dev_2.29-0ubuntu3 libstdc++-8-dev_8.3.0-16ubuntu3 libstdc++6_9.1.0-5ubuntu1 linux-libc-dev_5.0.0-20.21
Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1 apt_1.9.1 autoconf_2.69-11 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.2ubuntu3 base-passwd_3.5.46 bash_5.0-4ubuntu1 binutils_2.32.51.20190702-1ubuntu1 binutils-arm-linux-gnueabihf_2.32.51.20190702-1ubuntu1 binutils-common_2.32.51.20190702-1ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu2 build-essential_12.6ubuntu1 bzip2_1.0.6-9.1 ca-certificates_20190110 coreutils_8.30-3ubuntu1 cpp_4:8.3.0-1ubuntu3 cpp-8_8.3.0-16ubuntu3 dash_0.5.10.2-5 dctrl-tools_2.24-3 debconf_1.5.72 debhelper_12.1.1ubuntu1 debianutils_4.8.6.1 dh-autoreconf_19 dh-r_20190121 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dmsetup_2:1.02.155-2ubuntu4 dpkg_1.19.6ubuntu1 dpkg-dev_1.19.6ubuntu1 dwz_0.12.20190702-1ubuntu1 e2fslibs_1.45.2-1ubuntu1 e2fsprogs_1.45.2-1ubuntu1 fakeroot_1.23-1 fdisk_2.33.1-0.1ubuntu2 file_1:5.35-4 findutils_4.6.0+git+20190209-2 fontconfig_2.13.1-2ubuntu2 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r-bioc-biocgenerics_0.28.0-2 readline-common_8.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-biobase-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-6ubuntu9 systemd-sysv_240-6ubuntu9 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.93-8ubuntu1 tar_1.30+dfsg-6 tzdata_2019a-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 unzip_6.0-23ubuntu1 util-linux_2.33.1-0.1ubuntu2 x11-common_1:7.7+19ubuntu12 xauth_1:1.0.10-1 xdg-utils_1.1.3-1ubuntu2 xz-utils_5.2.4-1 zip_3.0-11build1 zlib1g_1:1.2.11.dfsg-1ubuntu2 zlib1g-dev_1:1.2.11.dfsg-1ubuntu2

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| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: Signature made Wed Jul  3 09:55:41 2019 UTC
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-bioc-biobase_2.44.0-1.dsc
dpkg-source: info: extracting r-bioc-biobase in r-bioc-biobase-2.44.0
dpkg-source: info: unpacking r-bioc-biobase_2.44.0.orig.tar.gz
dpkg-source: info: unpacking r-bioc-biobase_2.44.0-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying exclude_testing_golubEsets.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LANG=C.UTF-8
LC_ALL=C.UTF-8
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dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package r-bioc-biobase
dpkg-buildpackage: info: source version 2.44.0-1
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
dh clean --buildsystem R
   dh_auto_clean -O--buildsystem=R
   dh_autoreconf_clean -O--buildsystem=R
   dh_clean -O--buildsystem=R
 debian/rules build-arch
dh build-arch --buildsystem R
   dh_update_autotools_config -a -O--buildsystem=R
   dh_autoreconf -a -O--buildsystem=R
   dh_auto_configure -a -O--buildsystem=R
   dh_auto_build -a -O--buildsystem=R
   dh_auto_test -a -O--buildsystem=R
   create-stamp debian/debhelper-build-stamp
 fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
   dh_testroot -a -O--buildsystem=R
   dh_prep -a -O--buildsystem=R
   dh_auto_install -a -O--buildsystem=R
I: R packages needed for DEP8: runit
I: R Package: Biobase Version: 2.44.0
I: Building using R version 3.6.0.20190628-1ubuntu1
I: R API version: r-api-3.5
I: Using built-time from d/changelog: Wed, 03 Jul 2019 11:50:34 +0200
	mkdir -p /<<PKGBUILDDIR>>/debian/r-bioc-biobase/usr/lib/R/site-library
	R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-bioc-biobase/usr/lib/R/site-library --clean . "--built-timestamp='Wed, 03 Jul 2019 11:50:34 +0200'"
* installing *source* package ‘Biobase’ ...
** using staged installation
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG     -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-_KkR_B/r-base-3.6.0.20190628=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c Rinit.c -o Rinit.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG     -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-_KkR_B/r-base-3.6.0.20190628=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c anyMissing.c -o anyMissing.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG     -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-_KkR_B/r-base-3.6.0.20190628=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c envir.c -o envir.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG     -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-_KkR_B/r-base-3.6.0.20190628=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c matchpt.c -o matchpt.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG     -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-_KkR_B/r-base-3.6.0.20190628=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c rowMedians.c -o rowMedians.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG     -fpic  -g -O2 -fdebug-prefix-map=/build/r-base-_KkR_B/r-base-3.6.0.20190628=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g  -c sublist_extract.c -o sublist_extract.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o Biobase.so Rinit.o anyMissing.o envir.o matchpt.o rowMedians.o sublist_extract.o -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-bioc-biobase/usr/lib/R/site-library/00LOCK-r-bioc-biobase-2.44.0/00new/Biobase/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Biobase)
W: Ignoring specified R dependency: R (>= 2.10)
I: Using r-bioc-biocgenerics for Depends:BiocGenerics (>= 0.27.1)
I: Using r-cran-runit for Recommends:runit
W: Cannot find a debian package for Suggests:tkWidgets
W: Cannot find a debian package for Suggests:ALL
W: Cannot find a debian package for Suggests:golubEsets
I: BioConductor API version: r-api-bioc-3.9
   dh_installdocs -a -O--buildsystem=R
   dh_installchangelogs -a -O--buildsystem=R
   dh_installinit -a -O--buildsystem=R
   dh_installsystemduser -a -O--buildsystem=R
   dh_perl -a -O--buildsystem=R
   dh_link -a -O--buildsystem=R
   dh_strip_nondeterminism -a -O--buildsystem=R
   dh_compress -a -O--buildsystem=R
   dh_fixperms -a -O--buildsystem=R
   dh_missing -a -O--buildsystem=R
   dh_dwz -a -O--buildsystem=R
   dh_strip -a -O--buildsystem=R
   dh_makeshlibs -a -O--buildsystem=R
   dh_shlibdeps -a -O--buildsystem=R
   dh_installdeb -a -O--buildsystem=R
   dh_gencontrol -a -O--buildsystem=R
   dh_md5sums -a -O--buildsystem=R
   dh_builddeb -a -O--buildsystem=R
INFO: pkgstriptranslations version 144
INFO: pkgstriptranslations version 144
pkgstriptranslations: processing r-bioc-biobase (in debian/r-bioc-biobase); do_strip: , oemstrip: 
pkgstriptranslations: processing r-bioc-biobase-dbgsym (in debian/.debhelper/r-bioc-biobase/dbgsym-root); do_strip: , oemstrip: 
pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>"
pkgstripfiles: processing control file: debian/r-bioc-biobase/DEBIAN/control, package r-bioc-biobase, directory debian/r-bioc-biobase
pkgstripfiles: Truncating usr/share/doc/r-bioc-biobase/changelog.Debian.gz to topmost ten records
pkgstripfiles: Running PNG optimization (using 4 cpus) for package r-bioc-biobase ...
pkgstripfiles: No PNG files.
dpkg-deb: building package 'r-bioc-biobase' in '../r-bioc-biobase_2.44.0-1_armhf.deb'.
pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>"
pkgstripfiles: processing control file: debian/.debhelper/r-bioc-biobase/dbgsym-root/DEBIAN/control, package r-bioc-biobase-dbgsym, directory debian/.debhelper/r-bioc-biobase/dbgsym-root
dpkg-deb: building package 'r-bioc-biobase-dbgsym' in 'debian/.debhelper/scratch-space/build-r-bioc-biobase/r-bioc-biobase-dbgsym_2.44.0-1_armhf.deb'.
	Renaming r-bioc-biobase-dbgsym_2.44.0-1_armhf.deb to r-bioc-biobase-dbgsym_2.44.0-1_armhf.ddeb
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mLaunchpad Build Daemon <buildd@bos02-arm64-008.buildd> >../r-bioc-biobase_2.44.0-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 20190703-1713

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


r-bioc-biobase_2.44.0-1_armhf.changes:
--------------------------------------

Format: 1.8
Date: Wed, 03 Jul 2019 11:50:34 +0200
Source: r-bioc-biobase
Binary: r-bioc-biobase
Architecture: armhf
Version: 2.44.0-1
Distribution: eoan-proposed
Urgency: medium
Maintainer: Launchpad Build Daemon <buildd@bos02-arm64-008.buildd>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 r-bioc-biobase - base functions for Bioconductor
Changes:
 r-bioc-biobase (2.44.0-1) unstable; urgency=medium
 .
   [ Dylan Aïssi ]
   * Add Testsuite: autopkgtest-pkg-r
 .
   [ Andreas Tille ]
   * New upstream version
   * debhelper 12
   * Standards-Version: 4.3.0
   * Remove trailing whitespace in debian/copyright
   * rename debian/tests/control.autodep8 to debian/tests/control
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+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


r-bioc-biobase_2.44.0-1_armhf.deb
---------------------------------

 new debian package, version 2.0.
 size 2220520 bytes: control archive=4360 bytes.
    1089 bytes,    22 lines      control              
   12409 bytes,   129 lines      md5sums              
 Package: r-bioc-biobase
 Version: 2.44.0-1
 Architecture: armhf
 Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
 Original-Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
 Installed-Size: 2947
 Depends: r-base-core (>= 3.6.0.20190628-1ubuntu1), r-api-3.5, r-api-bioc-3.9, r-bioc-biocgenerics (>= 0.27.1), libc6 (>= 2.4)
 Recommends: r-cran-runit
 Section: gnu-r
 Priority: optional
 Homepage: https://bioconductor.org/packages/Biobase/
 Description: base functions for Bioconductor
  Biobase is part of the Bioconductor project, and is used by many other
  packages. Biobase contains standardized data structures to represent genomic
  data, and functions that are needed by many other packages or which replace R
  functions.
  .
  Bioconductor is a project to develop innovative software tools for use in
  computational biology. It is based on the R language. You should already be
  quite familiar with R before using Bioconductor. Bioconductor packages provide
  flexible interactive tools for carrying out a number of different computational
  tasks.

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drwxr-xr-x root/root         0 2019-07-03 09:50 ./usr/lib/
drwxr-xr-x root/root         0 2019-07-03 09:50 ./usr/lib/R/
drwxr-xr-x root/root         0 2019-07-03 09:50 ./usr/lib/R/site-library/
drwxr-xr-x root/root         0 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/
-rw-r--r-- root/root       822 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/CITATION
drwxr-xr-x root/root         0 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/Code/
-rw-r--r-- root/root       201 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/Code/DESCRIPTION
drwxr-xr-x root/root         0 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/Code/R/
-rw-r--r-- root/root        91 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/Code/R/get@PKGNAME@.R
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-rw-r--r-- root/root       487 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/Code/man/@PKGNAME@.Rd
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-rw-r--r-- root/root      1344 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/DESCRIPTION
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-rw-r--r-- root/root       342 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/Meta/vignette.rds
-rw-r--r-- root/root      3144 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/NAMESPACE
-rw-r--r-- root/root      5473 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/NEWS
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-rw-r--r-- root/root      1056 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/R/Biobase
-rw-r--r-- root/root    665201 2019-07-03 09:50 ./usr/lib/R/site-library/Biobase/R/Biobase.rdb
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Purging /<<BUILDDIR>>
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Build Architecture: armhf
Build-Space: 8752
Build-Time: 48
Distribution: eoan-proposed
Host Architecture: armhf
Install-Time: 51
Job: r-bioc-biobase_2.44.0-1.dsc
Machine Architecture: arm64
Package: r-bioc-biobase
Package-Time: 101
Source-Version: 2.44.0-1
Space: 8752
Status: successful
Version: 2.44.0-1
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Finished at 20190703-1713
Build needed 00:01:41, 8752k disc space
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Scanning for processes to kill in build PACKAGEBUILD-17217883