python-pyvcf 0.6.8+git20170215.476169c-9build1 source package in Ubuntu
Changelog
python-pyvcf (0.6.8+git20170215.476169c-9build1) lunar; urgency=medium * No-change rebuild with Python 3.11 only -- Graham Inggs <email address hidden> Thu, 16 Mar 2023 07:29:17 +0000
Upload details
- Uploaded by:
- Graham Inggs
- Uploaded to:
- Lunar
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Mantic | release | universe | misc | |
| Lunar | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| python-pyvcf_0.6.8+git20170215.476169c.orig.tar.xz | 913.8 KiB | df89a50c3b0faed0acffe86377ceca77053b2fc516de95e4a14623bbef42fb87 |
| python-pyvcf_0.6.8+git20170215.476169c-9build1.debian.tar.xz | 10.0 KiB | 81edf52e3d8a94cad0db056f40181917398adcb70e31402082ac6596c7c23a2a |
| python-pyvcf_0.6.8+git20170215.476169c-9build1.dsc | 2.4 KiB | 5d3086ac1d721258b6ee5c83f33612b49c21d19dc89055a130de17422aee2359 |
Available diffs
Binary packages built by this source
- python-pyvcf-examples: Example data for Variant Call Format (VCF) parser for Python
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
.
The intent of this module is to mimic the ``csv`` module in the Python
stdlib, as opposed to more flexible serialization formats like JSON or
YAML. ``vcf`` will attempt to parse the content of each record based on
the data types specified in the meta-information lines -- specifically
the ##INFO and
##FORMAT lines. If these lines are missing or incomplete, it will check
against the reserved types mentioned in the spec. Failing that, it will
just return strings.
.
This package provides example data to test the Python modules.
- python3-vcf: Variant Call Format (VCF) parser for Python 3
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
.
The intent of this module is to mimic the ``csv`` module in the Python
stdlib, as opposed to more flexible serialization formats like JSON or
YAML. ``vcf`` will attempt to parse the content of each record based on
the data types specified in the meta-information lines -- specifically
the ##INFO and
##FORMAT lines. If these lines are missing or incomplete, it will check
against the reserved types mentioned in the spec. Failing that, it will
just return strings.
.
This package provides the Python 3 modules.
- python3-vcf-dbgsym: debug symbols for python3-vcf
- pyvcf: helper scripts for Variant Call Format (VCF) parser
The Variant Call Format (VCF) specifies the format of a text file used
in bioinformatics for storing gene sequence variations. The format has
been developed with the advent of large-scale genotyping and DNA
sequencing projects, such as the 1000 Genomes Project.
.
The intent of this module is to mimic the ``csv`` module in the Python
stdlib, as opposed to more flexible serialization formats like JSON or
YAML. ``vcf`` will attempt to parse the content of each record based on
the data types specified in the meta-information lines -- specifically
the ##INFO and
##FORMAT lines. If these lines are missing or incomplete, it will check
against the reserved types mentioned in the spec. Failing that, it will
just return strings.
.
This package provides helper scripts using python3-pyvcf.
