python-pyfaidx 0.4.8.1-1 source package in Ubuntu
Changelog
python-pyfaidx (0.4.8.1-1) unstable; urgency=medium * New upstream version * debhelper 10 * d/watch: version=4 * New Build-Depends: python-mock, python3-mock -- Andreas Tille <email address hidden> Sun, 11 Dec 2016 17:37:58 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Bionic | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| python-pyfaidx_0.4.8.1-1.dsc | 2.3 KiB | e5dd7f0e8c707e4294906672d82b8251ac9acd427fcd24326dcf5f233c44d7ca |
| python-pyfaidx_0.4.8.1.orig.tar.gz | 57.1 KiB | 976ab943c6a48f87429e8023a4d6faef5d335a87b2323dc42a0ee31fe4952fa4 |
| python-pyfaidx_0.4.8.1-1.debian.tar.xz | 3.9 KiB | 1d468064a2d5123a34ae23f8a58f3db2e57e29f709a723e8e58136b1aab2e7e1 |
Available diffs
- diff from 0.4.7.1-1 to 0.4.8.1-1 (10.7 KiB)
No changes file available.
Binary packages built by this source
- python-pyfaidx: efficient random access to fasta subsequences for Python
Samtools provides a function "faidx" (FAsta InDeX), which creates a
small flat index file ".fai" allowing for fast random access to any
subsequence in the indexed FASTA file, while loading a minimal amount of
the file in to memory. This Python module implements pure Python classes
for indexing, retrieval, and in-place modification of FASTA files using
a samtools compatible index. The pyfaidx module is API compatible with
the pygr seqdb module. A command-line script "faidx" is installed
alongside the pyfaidx module, and facilitates complex manipulation of
FASTA files without any programming knowledge.
.
This package provides the Python 2 modules to access fasta files.
- python-pyfaidx-examples: No summary available for python-pyfaidx-examples in ubuntu zesty.
No description available for python-
pyfaidx- examples in ubuntu zesty.
- python3-pyfaidx: efficient random access to fasta subsequences for Python 3
Samtools provides a function "faidx" (FAsta InDeX), which creates a
small flat index file ".fai" allowing for fast random access to any
subsequence in the indexed FASTA file, while loading a minimal amount of
the file in to memory. This Python module implements pure Python classes
for indexing, retrieval, and in-place modification of FASTA files using
a samtools compatible index. The pyfaidx module is API compatible with
the pygr seqdb module. A command-line script "faidx" is installed
alongside the pyfaidx module, and facilitates complex manipulation of
FASTA files without any programming knowledge.
.
This package provides the Python 3 modules to access fasta files.
