Ubuntu
python-freecontact package

python-freecontact 1.1-6build8 source package in Ubuntu

Changelog

python-freecontact (1.1-6build8) noble; urgency=medium

  * No-change rebuild for CVE-2024-3094

 -- William Grant <email address hidden>  Mon, 01 Apr 2024 18:28:20 +1100

Upload details

Uploaded by:
William Grant
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc

Downloads

File Size SHA-256 Checksum
python-freecontact_1.1.orig.tar.gz 64.4 KiB 895e06aa9f7878f7fff34b8f851ee361967a3cc1f3b441de32dbcbf1f31aaa85
python-freecontact_1.1-6build8.debian.tar.xz 4.4 KiB 8032d3450f7608706ba46bdfa6edc98e748a760794a1d98a523a1ee8d6ae67b8
python-freecontact_1.1-6build8.dsc 2.2 KiB 3d05cb70d337b7a8adb4be874511e8bce8282c4663322dc163799c7e73358833

Available diffs

View changes file

Binary packages built by this source

python3-freecontact: fast protein contact predictor - binding for Python3

 FreeContact is a protein residue contact predictor optimized for speed.
 Its input is a multiple sequence alignment. FreeContact can function as an
 accelerated drop-in for the published contact predictors
 EVfold-mfDCA of DS. Marks (2011) and
 PSICOV of D. Jones (2011).
 .
 FreeContact is accelerated by a combination of vector instructions, multiple
 threads, and faster implementation of key parts.
 Depending on the alignment, 8-fold or higher speedups are possible.
 .
 A sufficiently large alignment is required for meaningful results.
 As a minimum, an alignment with an effective (after-weighting) sequence count
 bigger than the length of the query sequence should be used. Alignments with
 tens of thousands of (effective) sequences are considered good input.
 .
 jackhmmer(1) from the hmmer package, or hhblits(1) from hhsuite
 can be used to generate the alignments, for example.
 .
 This package contains the Python3 binding.

python3-freecontact-dbgsym: debug symbols for python3-freecontact