Ubuntu
python-bx package

python-bx 0.8.13-1build2 source package in Ubuntu

Changelog

python-bx (0.8.13-1build2) lunar; urgency=medium

  * No-change rebuild with Python 3.11 as supported

 -- Graham Inggs <email address hidden>  Thu, 03 Nov 2022 17:39:51 +0000

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Uploaded by:
Graham Inggs
Uploaded to:
Lunar
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

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File Size SHA-256 Checksum
python-bx_0.8.13.orig.tar.gz 1.6 MiB 38597646e52ae183a03a598759ce152af91199a32c5a82c3be2b0f7ead0e1880
python-bx_0.8.13-1build2.debian.tar.xz 11.8 KiB 74e719df15c45d2032ff95e743a9f7fc12ffabc63407a5f87db5e91cf2e6ac97
python-bx_0.8.13-1build2.dsc 2.2 KiB 73e354d1b4e3460e07bb6634194a75db34d574c6724a8c74ff680e13209c210c

Available diffs

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Binary packages built by this source

python3-bx: library to manage genomic data and its alignment

 The bx-python project is a Python3 library and associated set of scripts to
 allow for rapid implementation of genome scale analyses. The library contains
 a variety of useful modules, but the particular strengths are:
  * Classes for reading and working with genome-scale multiple local
    alignments (in MAF, AXT, and LAV formats)
  * Generic data structure for indexing on disk files that contain blocks of
    data associated with intervals on various sequences (used, for example, to
    provide random access to individual alignments in huge files; optimized
    for use over network filesystems)
  * Data structures for working with intervals on sequences
  * "Binned bitsets" which act just like chromosome sized bit arrays, but
    lazily allocate regions and allow large blocks of all set or all unset
    bits to be stored compactly
  * "Intersecter" for performing fast intersection tests that preserve both
    query and target intervals and associated annotation

python3-bx-dbgsym: debug symbols for python3-bx