| 2009-09-18 12:49:02 |
Ole Streicher |
bug |
|
|
added bug |
| 2009-09-18 12:52:58 |
Ole Streicher |
description |
the following code fails for me if the output file already exists:
>>> import pyfits
>>> pyfits.PrimaryHDU().writeto('Map.fits', clobber='True')
/var/lib/python-support/python2.6/pyfits/NP_pyfits.py:4895:
DeprecationWarning: functions overriding warnings.showwarning() must
support the 'line' argument
warnings.warn( "Overwrite existing file '%s'." % name)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
1483, in writeto
classExtensions=classExtensions)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
4895, in writeto
warnings.warn( "Overwrite existing file '%s'." % name)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line 76,
in showwarning
_showwarning(message, category, filename, lineno, file)
File "/usr/lib/python2.6/warnings.py", line 29, in _show_warning
file.write(formatwarning(message, category, filename, lineno, line))
TypeError: formatwarning() takes exactly 4 arguments (5 given)
This happens on Ubuntu 9.04 with python 2.6.2 and pyfits 1.3-2.
I contacted the pyfits author and go the answer that pyfits 1.3 is not compatible with python 2.6.
So, probably it would be the best to update the pyfits in the repository with a current version? |
the following code fails for me if the output file already exists:
>>> import pyfits
>>> pyfits.PrimaryHDU().writeto('Map.fits', clobber='True')
/var/lib/python-support/python2.6/pyfits/NP_pyfits.py:4895:
DeprecationWarning: functions overriding warnings.showwarning() must
support the 'line' argument
warnings.warn( "Overwrite existing file '%s'." % name)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
1483, in writeto
classExtensions=classExtensions)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
4895, in writeto
warnings.warn( "Overwrite existing file '%s'." % name)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line 76,
in showwarning
_showwarning(message, category, filename, lineno, file)
File "/usr/lib/python2.6/warnings.py", line 29, in _show_warning
file.write(formatwarning(message, category, filename, lineno, line))
TypeError: formatwarning() takes exactly 4 arguments (5 given)
This happens on Ubuntu 9.04 with python 2.6.2 and pyfits 1.3-2.
I contacted the pyfits author and go the answer that pyfits 1.3 is not compatible with python 2.6.
So, probably it would be the best to update the pyfits in the repository with a current version?
Fedora Linux had the same problem, see https://bugzilla.redhat.com/show_bug.cgi?id=509203
From there I got the following additional info:
This bug was fixed upstream in pyfits version 2.1. See the CHANGELOG here:
http://www.stsci.edu/resources/software_hardware/pyfits/release
See this scipy mailing list thread:
http://mail.scipy.org/pipermail/astropy/2009-June/000827.html
|
|
| 2012-06-03 22:48:59 |
Launchpad Janitor |
pyfits (Ubuntu): status |
New |
Confirmed |
|
| 2012-06-03 22:49:11 |
Julian Taylor |
pyfits (Ubuntu): status |
Confirmed |
Fix Released |
|
| 2012-06-03 22:49:17 |
Julian Taylor |
nominated for series |
|
Ubuntu Lucid |
|
| 2012-06-03 22:49:17 |
Julian Taylor |
bug task added |
|
pyfits (Ubuntu Lucid) |
|
| 2012-06-03 23:05:05 |
Julian Taylor |
description |
the following code fails for me if the output file already exists:
>>> import pyfits
>>> pyfits.PrimaryHDU().writeto('Map.fits', clobber='True')
/var/lib/python-support/python2.6/pyfits/NP_pyfits.py:4895:
DeprecationWarning: functions overriding warnings.showwarning() must
support the 'line' argument
warnings.warn( "Overwrite existing file '%s'." % name)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
1483, in writeto
classExtensions=classExtensions)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
4895, in writeto
warnings.warn( "Overwrite existing file '%s'." % name)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line 76,
in showwarning
_showwarning(message, category, filename, lineno, file)
File "/usr/lib/python2.6/warnings.py", line 29, in _show_warning
file.write(formatwarning(message, category, filename, lineno, line))
TypeError: formatwarning() takes exactly 4 arguments (5 given)
This happens on Ubuntu 9.04 with python 2.6.2 and pyfits 1.3-2.
I contacted the pyfits author and go the answer that pyfits 1.3 is not compatible with python 2.6.
So, probably it would be the best to update the pyfits in the repository with a current version?
Fedora Linux had the same problem, see https://bugzilla.redhat.com/show_bug.cgi?id=509203
From there I got the following additional info:
This bug was fixed upstream in pyfits version 2.1. See the CHANGELOG here:
http://www.stsci.edu/resources/software_hardware/pyfits/release
See this scipy mailing list thread:
http://mail.scipy.org/pipermail/astropy/2009-June/000827.html
|
TEST CASE:
the following code fails for me if the output file already exists:
>>> import pyfits
>>> pyfits.PrimaryHDU().writeto('Map.fits', clobber='True')
/var/lib/python-support/python2.6/pyfits/NP_pyfits.py:4895:
DeprecationWarning: functions overriding warnings.showwarning() must
support the 'line' argument
warnings.warn( "Overwrite existing file '%s'." % name)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
1483, in writeto
classExtensions=classExtensions)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
4895, in writeto
warnings.warn( "Overwrite existing file '%s'." % name)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line 76,
in showwarning
_showwarning(message, category, filename, lineno, file)
File "/usr/lib/python2.6/warnings.py", line 29, in _show_warning
file.write(formatwarning(message, category, filename, lineno, line))
TypeError: formatwarning() takes exactly 4 arguments (5 given)
This happens on Ubuntu 9.04 with python 2.6.2 and pyfits 1.3-2.
I contacted the pyfits author and go the answer that pyfits 1.3 is not compatible with python 2.6.
So, probably it would be the best to update the pyfits in the repository with a current version?
Fedora Linux had the same problem, see https://bugzilla.redhat.com/show_bug.cgi?id=509203
From there I got the following additional info:
This bug was fixed upstream in pyfits version 2.1. See the CHANGELOG here:
http://www.stsci.edu/resources/software_hardware/pyfits/release
See this scipy mailing list thread:
http://mail.scipy.org/pipermail/astropy/2009-June/000827.html
REGRESSION POTENTIAL:
simple fix to the 2.6 api of the warnings module, should not break anything. |
|
| 2012-06-03 23:06:04 |
Julian Taylor |
description |
TEST CASE:
the following code fails for me if the output file already exists:
>>> import pyfits
>>> pyfits.PrimaryHDU().writeto('Map.fits', clobber='True')
/var/lib/python-support/python2.6/pyfits/NP_pyfits.py:4895:
DeprecationWarning: functions overriding warnings.showwarning() must
support the 'line' argument
warnings.warn( "Overwrite existing file '%s'." % name)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
1483, in writeto
classExtensions=classExtensions)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
4895, in writeto
warnings.warn( "Overwrite existing file '%s'." % name)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line 76,
in showwarning
_showwarning(message, category, filename, lineno, file)
File "/usr/lib/python2.6/warnings.py", line 29, in _show_warning
file.write(formatwarning(message, category, filename, lineno, line))
TypeError: formatwarning() takes exactly 4 arguments (5 given)
This happens on Ubuntu 9.04 with python 2.6.2 and pyfits 1.3-2.
I contacted the pyfits author and go the answer that pyfits 1.3 is not compatible with python 2.6.
So, probably it would be the best to update the pyfits in the repository with a current version?
Fedora Linux had the same problem, see https://bugzilla.redhat.com/show_bug.cgi?id=509203
From there I got the following additional info:
This bug was fixed upstream in pyfits version 2.1. See the CHANGELOG here:
http://www.stsci.edu/resources/software_hardware/pyfits/release
See this scipy mailing list thread:
http://mail.scipy.org/pipermail/astropy/2009-June/000827.html
REGRESSION POTENTIAL:
simple fix to the 2.6 api of the warnings module, should not break anything. |
TEST CASE:
the following code fails for me if the output file already exists:
>>> import pyfits
>>> pyfits.PrimaryHDU().writeto('Map.fits', clobber='True')
>>> pyfits.PrimaryHDU().writeto('Map.fits', clobber='True')
/var/lib/python-support/python2.6/pyfits/NP_pyfits.py:4895:
DeprecationWarning: functions overriding warnings.showwarning() must
support the 'line' argument
warnings.warn( "Overwrite existing file '%s'." % name)
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
1483, in writeto
classExtensions=classExtensions)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line
4895, in writeto
warnings.warn( "Overwrite existing file '%s'." % name)
File "/var/lib/python-support/python2.6/pyfits/NP_pyfits.py", line 76,
in showwarning
_showwarning(message, category, filename, lineno, file)
File "/usr/lib/python2.6/warnings.py", line 29, in _show_warning
file.write(formatwarning(message, category, filename, lineno, line))
TypeError: formatwarning() takes exactly 4 arguments (5 given)
This happens on Ubuntu 10.04 with python 2.6.2 and pyfits 1.3-2.
REGRESSION POTENTIAL:
simple fix to the 2.6 api of the warnings module, should not break anything.
original report:
I contacted the pyfits author and go the answer that pyfits 1.3 is not compatible with python 2.6.
So, probably it would be the best to update the pyfits in the repository with a current version?
Fedora Linux had the same problem, see https://bugzilla.redhat.com/show_bug.cgi?id=509203
From there I got the following additional info:
This bug was fixed upstream in pyfits version 2.1. See the CHANGELOG here:
http://www.stsci.edu/resources/software_hardware/pyfits/release
See this scipy mailing list thread:
http://mail.scipy.org/pipermail/astropy/2009-June/000827.html |
|
| 2012-06-03 23:30:11 |
Julian Taylor |
bug |
|
|
added subscriber Julian Taylor |
| 2012-06-21 23:49:39 |
Clint Byrum |
pyfits (Ubuntu Lucid): status |
New |
Fix Committed |
|
| 2012-06-21 23:49:41 |
Clint Byrum |
bug |
|
|
added subscriber Ubuntu Stable Release Updates Team |
| 2012-06-21 23:49:45 |
Clint Byrum |
bug |
|
|
added subscriber SRU Verification |
| 2012-06-21 23:49:47 |
Clint Byrum |
tags |
|
verification-needed |
|
| 2012-06-22 00:10:34 |
Launchpad Janitor |
branch linked |
|
lp:~ubuntu-branches/ubuntu/lucid/pyfits/lucid-proposed |
|
| 2012-07-05 07:23:36 |
Ole Streicher |
removed subscriber Ole Streicher |
|
|
|
| 2012-11-16 17:29:45 |
Brian Murray |
tags |
verification-needed |
removal-candidate verification-needed |
|
| 2012-11-30 22:17:52 |
Brian Murray |
pyfits (Ubuntu Lucid): status |
Fix Committed |
Triaged |
|
| 2012-11-30 22:18:29 |
Brian Murray |
tags |
removal-candidate verification-needed |
removal-candidate |
|
| 2012-11-30 22:18:30 |
Brian Murray |
tags |
removal-candidate |
|
|
| 2015-06-17 12:17:37 |
Rolf Leggewie |
pyfits (Ubuntu Lucid): status |
Triaged |
Won't Fix |
|
