prodigal 1:2.6.3-6 source package in Ubuntu

Changelog

prodigal (1:2.6.3-6) unstable; urgency=medium

  * Fix watch file
  * Standards-Version: 4.6.1 (routine-update)

 -- Andreas Tille <email address hidden>  Tue, 06 Dec 2022 14:00:03 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc
Mantic release universe misc
Lunar release universe misc

Downloads

File Size SHA-256 Checksum
prodigal_2.6.3-6.dsc 1.9 KiB 95d30d7920c55931a643135694c70fb846d085288b071cfedcd0cd8cb932e4ee
prodigal_2.6.3.orig.tar.gz 596.6 KiB 89094ad4bff5a8a8732d899f31cec350f5a4c27bcbdd12663f87c9d1f0ec599f
prodigal_2.6.3-6.debian.tar.xz 48.1 KiB e47e360e0d4a97a361ed1cb6c294072a9d847f2a28a88e7d406122b4fa9c8583

Available diffs

No changes file available.

Binary packages built by this source

prodigal: Microbial (bacterial and archaeal) gene finding program

 Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a
 microbial (bacterial and archaeal) gene finding program developed at
 Oak Ridge National Laboratory and the University of Tennessee.
 Key features of Prodigal include:
 .
 Speed: Prodigal is an extremely fast gene recognition tool
 (written in very vanilla C). It can analyze an entire microbial genome
 in 30 seconds or less.
 .
 Accuracy: Prodigal is a highly accurate gene finder.
 It correctly locates the 3' end of every gene in the experimentally verified
 Ecogene data set (except those containing introns).
 It possesses a very sophisticated ribosomal binding site scoring system that
 enables it to locate the translation initiation site with great accuracy
 (96% of the 5' ends in the Ecogene data set are located correctly).
 .
 Specificity: Prodigal's false positive rate compares favorably with other
 gene identification programs, and usually falls under 5%.
 .
 GC-Content Indifferent: Prodigal performs well even in high GC genomes,
 with over a 90% perfect match (5'+3') to the Pseudomonas aeruginosa curated
 annotations.
 .
 Metagenomic Version: Prodigal can run in metagenomic mode and analyze
 sequences even when the organism is unknown.
 .
 Ease of Use: Prodigal can be run in one step on a single genomic sequence
 or on a draft genome containing many sequences. It does not need to be
 supplied with any knowledge of the organism, as it learns all the properties
 it needs to on its own.

prodigal-dbgsym: debug symbols for prodigal