plasmidid 1.6.5+dfsg-2 source package in Ubuntu
Changelog
plasmidid (1.6.5+dfsg-2) unstable; urgency=medium * Fix watch file * Standards-Version: 4.6.1 (routine-update) * Drop removed file from d/copyright -- Andreas Tille <email address hidden> Thu, 24 Nov 2022 17:16:21 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Oracular | release | universe | misc | |
| Noble | release | universe | misc | |
| Mantic | release | universe | misc | |
| Lunar | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| plasmidid_1.6.5+dfsg-2.dsc | 2.2 KiB | 8fbddaebe8f233d8504081d475599acd18419e13f1987ba1c600113467cfb08f |
| plasmidid_1.6.5+dfsg.orig.tar.xz | 80.8 MiB | bbe9f8caae7711ca59a5826c6cadf1cca152862a40a1a54361602bddad6d0766 |
| plasmidid_1.6.5+dfsg-2.debian.tar.xz | 3.9 KiB | e58d797183242730628416a56c29a188227022eec210f67e0253d0fbcf887b90 |
Available diffs
- diff from 1.6.5+dfsg-1 to 1.6.5+dfsg-2 (895 bytes)
No changes file available.
Binary packages built by this source
- plasmidid: mapping-based, assembly-assisted plasmid identification tool
PlasmidID is a mapping-based, assembly-assisted plasmid identification
tool that analyzes and gives graphic solution for plasmid
identification.
.
PlasmidID is a computational pipeline that maps Illumina reads over
plasmid database sequences. The k-mer filtered, most covered
sequences are clustered by identity to avoid redundancy and the
longest are used as scaffold for plasmid reconstruction. Reads are
assembled and annotated by automatic and specific annotation. All
information generated from mapping, assembly, annotation and local
alignment analyses is gathered and accurately represented in a
circular image which allow user to determine plasmidic composition in
any bacterial sample.
