phyml 3:3.3.20190321-2 source package in Ubuntu


phyml (3:3.3.20190321-2) unstable; urgency=medium

  * Fix autopkgtest
    Closes: #935598
  * Secure URI in copyright format
  * Remove trailing whitespace in debian/changelog
  * Remove obsolete fields Name, Contact from debian/upstream/metadata.

 -- Andreas Tille <email address hidden>  Sat, 24 Aug 2019 16:08:44 +0200

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Uploaded by:
Debian Med on 2019-08-24
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Original maintainer:
Debian Med
Medium Urgency

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Series Pocket Published Component Section
Eoan release on 2019-08-25 universe science


File Size SHA-256 Checksum
phyml_3.3.20190321-2.dsc 2.0 KiB 1d024c553ce789f007b414e47d731c8e7697200467c170eb14fcc550f33ff2a8
phyml_3.3.20190321.orig.tar.gz 2.1 MiB 5274546cda7445c947fd26838487cd4246e2becf18d333882b7a2a24dff853ee
phyml_3.3.20190321-2.debian.tar.xz 16.7 KiB 4404b2b508943267c82b298b9927cbc31b094448ed8a8096c19ffe114b424b37

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Binary packages built by this source

phyml: Phylogenetic estimation using Maximum Likelihood

 PhyML is a software that estimates maximum likelihood phylogenies from
 alignments of nucleotide or amino acid sequences. It provides a wide
 range of options that were designed to facilitate standard phylogenetic
 analyses. The main strengths of PhyML lies in the large number of
 substitution models coupled to various options to search the space of
 phylogenetic tree topologies, going from very fast and efficient methods
 to slower but generally more accurate approaches. It also implements
 two methods to evaluate branch supports in a sound statistical framework
 (the non-parametric bootstrap and the approximate likelihood ratio test).
 PhyML was designed to process moderate to large data sets. In theory,
 alignments with up to 4,000 sequences 2,000,000 character-long can
 be analyzed. In practice however, the amount of memory required to process
 a data set is proportional of the product of the number of sequences by their
 length. Hence, a large number of sequences can only be processed provided
 that they are short. Also, PhyML can handle long sequences provided that
 they are not numerous. With most standard personal computers, the “comfort
 zone” for PhyML generally lies around 3 to 500 sequences less than 2,000
 character long.
 This package also includes PhyTime.

phyml-dbgsym: debug symbols for phyml