octave-cli crashed with SIGSEGV in __GI___sigtimedwait()
Affects | Status | Importance | Assigned to | Milestone | |
---|---|---|---|---|---|
intel-mkl (Ubuntu) |
New
|
Medium
|
Unassigned | ||
octave (Ubuntu) |
New
|
Undecided
|
Unassigned |
Bug Description
$ octave-cli --eval __run_test_suite__
Integrated test scripts:
liboctave/
liboctave/
liboctave/
liboctave/
liboctave/
liboctave/
liboctave/
Segmentation fault (core dumped)
---
Octave does not work with Intel MKL;
$ dpkg -l | grep mkl
ii intel-mkl:amd64 2020.4.304-2 amd64 Intel® Math Kernel Library (Intel® MKL)
ii intel-mkl-
ii intel-mkl-doc 2020.4.304-2 all Intel® Math Kernel Library (Intel® MKL) (Doc)
ii intel-mkl-
ii libmkl-avx:amd64 2020.4.304-2 amd64 Intel® MKL: Kernel library for Intel® AVX enabled processors
ii libmkl-avx2:amd64 2020.4.304-2 amd64 Intel® MKL: Kernel library for Intel® AVX2 enabled processors
ii libmkl-avx512:amd64 2020.4.304-2 amd64 Intel® MKL: Kernel library for Intel® AVX-512 enabled processors
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-core:amd64 2020.4.304-2 amd64 Intel® MKL: Library dispatcher of Computational Layer
ii libmkl-def:amd64 2020.4.304-2 amd64 Intel® MKL: Default kernel library
ii libmkl-dev:amd64 2020.4.304-2 amd64 Intel® Math Kernel Library (Intel® MKL) (Dev)
ii libmkl-full-dev 2020.4.304-2 amd64 Intel® Math Kernel Library (Intel® MKL) (Full Version Dev)
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-locale 2020.4.304-2 amd64 Intel MKL: Locale Files Used by All Shared Objects
ii libmkl-mc:amd64 2020.4.304-2 amd64 Intel® MKL: Kernel library for Intel® SSSE3 enabled processors
ii libmkl-mc3:amd64 2020.4.304-2 amd64 Intel® MKL: Kernel library for Intel® SSE4.2 enabled processors
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-rt:amd64 2020.4.304-2 amd64 Intel® MKL: Single Dynamic Library (SDL)
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-
ii libmkl-vml-mc:amd64 2020.4.304-2 amd64 Intel® MKL : VM/VS/DF for Intel® SSSE3 enabled processors
ii libmkl-
ii libmkl-
ProblemType: Crash
DistroRelease: Ubuntu 22.04
Package: octave 6.2.0-1
ProcVersionSign
Uname: Linux 5.13.0-19-generic x86_64
ApportVersion: 2.20.11-0ubuntu75
Architecture: amd64
CasperMD5CheckR
CurrentDesktop: MATE
Date: Sat Jan 22 17:13:20 2022
ExecutablePath: /usr/bin/octave-cli
InstallationDate: Installed on 2022-01-15 (6 days ago)
InstallationMedia: Ubuntu-MATE 22.04 LTS "Jammy Jellyfish" - Alpha amd64 (20220115)
ProcCmdline: octave-cli
RebootRequiredPkgs: Error: path contained symlinks.
Signal: 11
SourcePackage: octave
StacktraceTop:
__GI__
__GI___sigwait (set=0x7f7ec983
?? () from /lib/x86_
start_thread (arg=<optimized out>) at pthread_
clone () at ../sysdeps/
Title: octave-cli crashed with SIGSEGV in __GI___
UpgradeStatus: No upgrade log present (probably fresh install)
UserGroups: adm cdrom dip lpadmin lxd plugdev sambashare sudo
separator:
$ export MKL_THREADING_ LAYER=gnu
$ octave-cli --eval __run_test_suite__
Integrated test scripts:
liboctave/ array/Array. cc-tst ....... ....... ....... ....... ....... pass 21/21 array/CMatrix. cc-tst ....... ....... ....... ....... .....fatal: caught signal Segmentation fault -- stopping myself...
liboctave/
Segmentation fault (core dumped)
Does not help.