Bruce Cowan is correct, the 03_fix_xinerama_stack patch introduces this problem, however upstream still has the problem that that patch is attempting to fix.
I have attached another patch that attempts to solve both problems. It's still not perfect; ideally we would like the default monitor to be the one the notification applet is on, as that way the notifications follow the notification area, which makes sense. Unfortunately this is not easy to determine.
Bruce Cowan is correct, the 03_fix_ xinerama_ stack patch introduces this problem, however upstream still has the problem that that patch is attempting to fix.
I have attached another patch that attempts to solve both problems. It's still not perfect; ideally we would like the default monitor to be the one the notification applet is on, as that way the notifications follow the notification area, which makes sense. Unfortunately this is not easy to determine.