https://launchpad.net/ubuntu/+source/nco/4.7.9-1/+build/16415077 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos02-arm64-016 4.4.0-142-generic #168-Ubuntu SMP Wed Jan 16 21:00:53 UTC 2019 aarch64 Buildd toolchain package versions: launchpad-buildd_167 python-lpbuildd_167 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.6 dpkg-dev_1.18.4ubuntu1.5 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 21 Feb 11:08:58 ntpdate[1834]: adjust time server 10.211.37.1 offset -0.028446 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=disco --arch=arm64 PACKAGEBUILD-16415077 --image-type chroot /home/buildd/filecache-default/12198815be27835f4527655ec2ee7fabeb41ea11 Creating target for build PACKAGEBUILD-16415077 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=disco --arch=arm64 PACKAGEBUILD-16415077 Starting target for build PACKAGEBUILD-16415077 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=disco --arch=arm64 PACKAGEBUILD-16415077 'deb http://ftpmaster.internal/ubuntu disco main universe' 'deb http://ftpmaster.internal/ubuntu disco-security main universe' 'deb http://ftpmaster.internal/ubuntu disco-updates main universe' 'deb http://ftpmaster.internal/ubuntu disco-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-16415077 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=disco --arch=arm64 PACKAGEBUILD-16415077 Updating target for build PACKAGEBUILD-16415077 Get:1 http://ftpmaster.internal/ubuntu disco InRelease [243 kB] Get:2 http://ftpmaster.internal/ubuntu disco-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu disco-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco-proposed InRelease [93.2 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main arm64 Packages [953 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main Translation-en [508 kB] Get:7 http://ftpmaster.internal/ubuntu disco/universe arm64 Packages [8874 kB] Get:8 http://ftpmaster.internal/ubuntu disco/universe Translation-en [5263 kB] Get:9 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 Packages [49.4 kB] Get:10 http://ftpmaster.internal/ubuntu disco-proposed/main Translation-en [29.4 kB] Get:11 http://ftpmaster.internal/ubuntu disco-proposed/universe arm64 Packages [200 kB] Get:12 http://ftpmaster.internal/ubuntu disco-proposed/universe Translation-en [111 kB] Fetched 16.5 MB in 7s (2524 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libreadline7 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: gcc-9-base libreadline8 The following packages will be upgraded: adduser apt base-passwd bash binutils binutils-aarch64-linux-gnu binutils-common bsdutils ca-certificates coreutils cpp-8 dash debconf debianutils diffutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk findutils g++-8 gcc-8 gcc-8-base gpg gpg-agent gpgconf gpgv grep gzip init init-system-helpers libacl1 libapt-pkg5.0 libargon2-1 libasan5 libassuan0 libatomic1 libattr1 libbinutils libblkid1 libcap-ng0 libcap2 libcc1-0 libcom-err2 libcomerr2 libcryptsetup12 libdb5.3 libdebconfclient0 libdpkg-perl libext2fs2 libfdisk1 libgcc-8-dev libgcc1 libgdbm-compat4 libgdbm6 libgnutls30 libgomp1 libgpg-error0 libhogweed4 libip4tc0 libitm1 libjson-c3 liblsan0 liblz4-1 liblzma5 libmount1 libmpfr6 libncurses6 libncursesw6 libnettle6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libperl5.28 libpng16-16 libprocps7 libsemanage-common libsemanage1 libsmartcols1 libsqlite3-0 libss2 libstdc++-8-dev libstdc++6 libsystemd0 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login lsb-base mount ncurses-base ncurses-bin optipng passwd perl perl-base perl-modules-5.28 pkgbinarymangler procps readline-common sed systemd systemd-sysv tar tzdata util-linux xz-utils zlib1g 115 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 60.6 MB of archives. After this operation, 8466 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu disco/main arm64 debianutils arm64 4.8.6.1 [85.4 kB] Get:2 http://ftpmaster.internal/ubuntu disco/main arm64 bash arm64 5.0-2ubuntu1 [611 kB] Get:3 http://ftpmaster.internal/ubuntu disco/main arm64 bsdutils arm64 1:2.33.1-0.1ubuntu1 [61.4 kB] Get:4 http://ftpmaster.internal/ubuntu disco/main arm64 coreutils arm64 8.30-1ubuntu1 [1173 kB] Get:5 http://ftpmaster.internal/ubuntu disco/main arm64 tar arm64 1.30+dfsg-5 [232 kB] Get:6 http://ftpmaster.internal/ubuntu disco/main arm64 dpkg arm64 1.19.4ubuntu3 [1088 kB] Get:7 http://ftpmaster.internal/ubuntu disco/main arm64 libperl5.28 arm64 5.28.1-4 [3663 kB] Get:8 http://ftpmaster.internal/ubuntu disco/main arm64 perl arm64 5.28.1-4 [204 kB] Get:9 http://ftpmaster.internal/ubuntu disco/main arm64 perl-base arm64 5.28.1-4 [1402 kB] Get:10 http://ftpmaster.internal/ubuntu disco/main arm64 perl-modules-5.28 all 5.28.1-4 [2811 kB] Get:11 http://ftpmaster.internal/ubuntu disco/main arm64 libdb5.3 arm64 5.3.28+dfsg1-0.3 [616 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main arm64 libgdbm6 arm64 1.18.1-3 [26.6 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main arm64 libgdbm-compat4 arm64 1.18.1-3 [6024 B] Get:14 http://ftpmaster.internal/ubuntu disco/main arm64 zlib1g arm64 1:1.2.11.dfsg-1ubuntu2 [51.6 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main arm64 debconf all 1.5.70 [122 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main arm64 dash arm64 0.5.10.2-4ubuntu1 [84.1 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main arm64 diffutils arm64 1:3.7-2 [191 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main arm64 findutils arm64 4.6.0+git+20190209-2 [322 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main arm64 grep arm64 3.3-1 [143 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main arm64 gzip arm64 1.9-3 [91.6 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main arm64 libsmartcols1 arm64 2.33.1-0.1ubuntu1 [86.5 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main arm64 libuuid1 arm64 2.33.1-0.1ubuntu1 [20.4 kB] Get:23 http://ftpmaster.internal/ubuntu disco/main arm64 libblkid1 arm64 2.33.1-0.1ubuntu1 [126 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main arm64 libfdisk1 arm64 2.33.1-0.1ubuntu1 [160 kB] Get:25 http://ftpmaster.internal/ubuntu disco/main arm64 libmount1 arm64 2.33.1-0.1ubuntu1 [137 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main arm64 libncurses6 arm64 6.1+20181013-2ubuntu2 [91.9 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main arm64 libtinfo6 arm64 6.1+20181013-2ubuntu2 [79.3 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main arm64 libncursesw6 arm64 6.1+20181013-2ubuntu2 [119 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main arm64 fdisk arm64 2.33.1-0.1ubuntu1 [113 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main arm64 login arm64 1:4.5-1.1ubuntu1 [262 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main arm64 util-linux arm64 2.33.1-0.1ubuntu1 [965 kB] Get:32 http://ftpmaster.internal/ubuntu disco/main arm64 ncurses-bin arm64 6.1+20181013-2ubuntu2 [159 kB] Get:33 http://ftpmaster.internal/ubuntu disco/main arm64 sed arm64 4.7-1 [186 kB] Get:34 http://ftpmaster.internal/ubuntu disco/main arm64 libdebconfclient0 arm64 0.247ubuntu1 [6416 B] Get:35 http://ftpmaster.internal/ubuntu disco/main arm64 base-passwd arm64 3.5.46 [47.0 kB] Get:36 http://ftpmaster.internal/ubuntu disco/main arm64 init-system-helpers all 1.56+nmu1 [38.2 kB] Get:37 http://ftpmaster.internal/ubuntu disco/main arm64 ncurses-base all 6.1+20181013-2ubuntu2 [17.9 kB] Get:38 http://ftpmaster.internal/ubuntu disco/main arm64 libnettle6 arm64 3.4.1-1 [122 kB] Get:39 http://ftpmaster.internal/ubuntu disco/main arm64 libhogweed4 arm64 3.4.1-1 [137 kB] Get:40 http://ftpmaster.internal/ubuntu disco/main arm64 libp11-kit0 arm64 0.23.15-2 [173 kB] Get:41 http://ftpmaster.internal/ubuntu disco/main arm64 libgnutls30 arm64 3.6.5-2ubuntu1 [699 kB] Get:42 http://ftpmaster.internal/ubuntu disco/main arm64 gcc-9-base arm64 9-20190216-1ubuntu1 [17.3 kB] Get:43 http://ftpmaster.internal/ubuntu disco/main arm64 libgcc1 arm64 1:9-20190216-1ubuntu1 [34.2 kB] Get:44 http://ftpmaster.internal/ubuntu disco/main arm64 liblz4-1 arm64 1.8.3-1ubuntu1 [64.6 kB] Get:45 http://ftpmaster.internal/ubuntu disco/main arm64 liblzma5 arm64 5.2.4-1 [89.1 kB] Get:46 http://ftpmaster.internal/ubuntu disco/main arm64 libstdc++6 arm64 9-20190216-1ubuntu1 [465 kB] Get:47 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libudev1 arm64 240-6ubuntu1 [65.0 kB] Get:48 http://ftpmaster.internal/ubuntu disco/main arm64 libzstd1 arm64 1.3.8+dfsg-3 [204 kB] Get:49 http://ftpmaster.internal/ubuntu disco/main arm64 libapt-pkg5.0 arm64 1.8.0~rc3ubuntu1 [754 kB] Get:50 http://ftpmaster.internal/ubuntu disco/main arm64 libpam0g arm64 1.3.1-5ubuntu1 [54.9 kB] Get:51 http://ftpmaster.internal/ubuntu disco/main arm64 libsemanage-common all 2.8-2 [7016 B] Get:52 http://ftpmaster.internal/ubuntu disco/main arm64 libsemanage1 arm64 2.8-2 [79.7 kB] Get:53 http://ftpmaster.internal/ubuntu disco/main arm64 libpam-modules-bin arm64 1.3.1-5ubuntu1 [36.7 kB] Get:54 http://ftpmaster.internal/ubuntu disco/main arm64 libpam-modules arm64 1.3.1-5ubuntu1 [242 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main arm64 passwd arm64 1:4.5-1.1ubuntu1 [790 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main arm64 adduser all 3.118ubuntu1 [163 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main arm64 libgpg-error0 arm64 1.35-1 [55.3 kB] Get:58 http://ftpmaster.internal/ubuntu disco/main arm64 gpgv arm64 2.2.12-1ubuntu3 [182 kB] Get:59 http://ftpmaster.internal/ubuntu disco/main arm64 apt arm64 1.8.0~rc3ubuntu1 [1163 kB] Get:60 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 systemd-sysv arm64 240-6ubuntu1 [9380 B] Get:61 http://ftpmaster.internal/ubuntu disco/main arm64 libattr1 arm64 1:2.4.47-4 [10.9 kB] Get:62 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libacl1 arm64 2.2.52-5 [17.4 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main arm64 libcap2 arm64 1:2.25-2 [13.3 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main arm64 libargon2-1 arm64 0~20171227-0.2 [18.4 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main arm64 libjson-c3 arm64 0.12.1+ds-2 [21.8 kB] Get:66 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libcryptsetup12 arm64 2:2.1.0-1ubuntu1 [137 kB] Get:67 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libip4tc0 arm64 1.8.2-3ubuntu1 [20.4 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main arm64 mount arm64 2.33.1-0.1ubuntu1 [110 kB] Get:69 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 systemd arm64 240-6ubuntu1 [3097 kB] Get:70 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libsystemd0 arm64 240-6ubuntu1 [230 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main arm64 libext2fs2 arm64 1.44.5-1 [153 kB] Get:72 http://ftpmaster.internal/ubuntu disco/main arm64 e2fsprogs arm64 1.44.5-1 [491 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main arm64 init arm64 1.56+nmu1 [6080 B] Get:74 http://ftpmaster.internal/ubuntu disco/main arm64 libcap-ng0 arm64 0.7.9-2 [10.5 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main arm64 libpam-runtime all 1.3.1-5ubuntu1 [37.3 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main arm64 libgomp1 arm64 9-20190216-1ubuntu1 [80.5 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main arm64 libitm1 arm64 9-20190216-1ubuntu1 [25.0 kB] Get:78 http://ftpmaster.internal/ubuntu disco/main arm64 libatomic1 arm64 9-20190216-1ubuntu1 [9176 B] Get:79 http://ftpmaster.internal/ubuntu disco/main arm64 libasan5 arm64 9-20190216-1ubuntu1 [365 kB] Get:80 http://ftpmaster.internal/ubuntu disco/main arm64 liblsan0 arm64 9-20190216-1ubuntu1 [126 kB] Get:81 http://ftpmaster.internal/ubuntu disco/main arm64 libtsan0 arm64 9-20190216-1ubuntu1 [283 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main arm64 libubsan1 arm64 9-20190216-1ubuntu1 [121 kB] Get:83 http://ftpmaster.internal/ubuntu disco/main arm64 g++-8 arm64 8.2.0-21ubuntu1 [8500 kB] Get:84 http://ftpmaster.internal/ubuntu disco/main arm64 gcc-8 arm64 8.2.0-21ubuntu1 [8230 kB] Get:85 http://ftpmaster.internal/ubuntu disco/main arm64 libstdc++-8-dev arm64 8.2.0-21ubuntu1 [1523 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main arm64 libgcc-8-dev arm64 8.2.0-21ubuntu1 [856 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main arm64 libmpfr6 arm64 4.0.2-1 [212 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main arm64 libcc1-0 arm64 9-20190216-1ubuntu1 [46.2 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main arm64 binutils-aarch64-linux-gnu arm64 2.32-3ubuntu1 [2193 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main arm64 libbinutils arm64 2.32-3ubuntu1 [455 kB] Get:91 http://ftpmaster.internal/ubuntu disco/main arm64 binutils arm64 2.32-3ubuntu1 [3364 B] Get:92 http://ftpmaster.internal/ubuntu disco/main arm64 binutils-common arm64 2.32-3ubuntu1 [200 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main arm64 cpp-8 arm64 8.2.0-21ubuntu1 [7412 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main arm64 gcc-8-base arm64 8.2.0-21ubuntu1 [18.9 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main arm64 libcom-err2 arm64 1.44.5-1 [9216 B] Get:96 http://ftpmaster.internal/ubuntu disco/main arm64 libprocps7 arm64 2:3.3.15-2ubuntu2 [31.8 kB] Get:97 http://ftpmaster.internal/ubuntu disco/main arm64 libss2 arm64 1.44.5-1 [10.6 kB] Get:98 http://ftpmaster.internal/ubuntu disco/main arm64 lsb-base all 10.2018112800ubuntu1 [12.6 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main arm64 procps arm64 2:3.3.15-2ubuntu2 [228 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main arm64 ca-certificates all 20190110 [146 kB] Get:101 http://ftpmaster.internal/ubuntu disco/main arm64 readline-common all 8.0-1 [53.4 kB] Get:102 http://ftpmaster.internal/ubuntu disco/main arm64 libreadline8 arm64 8.0-1 [123 kB] Get:103 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libsqlite3-0 arm64 3.27.1-2 [495 kB] Get:104 http://ftpmaster.internal/ubuntu disco/main arm64 tzdata all 2018i-1 [189 kB] Get:105 http://ftpmaster.internal/ubuntu disco/main arm64 xz-utils arm64 5.2.4-1 [81.5 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main arm64 libpng16-16 arm64 1.6.36-5 [174 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main arm64 dpkg-dev all 1.19.4ubuntu3 [549 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main arm64 libdpkg-perl all 1.19.4ubuntu3 [230 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main arm64 e2fslibs arm64 1.44.5-1 [2704 B] Get:110 http://ftpmaster.internal/ubuntu disco/main arm64 libassuan0 arm64 2.5.2-1 [32.9 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main arm64 gpg arm64 2.2.12-1ubuntu3 [437 kB] Get:112 http://ftpmaster.internal/ubuntu disco/main arm64 gpgconf arm64 2.2.12-1ubuntu3 [116 kB] Get:113 http://ftpmaster.internal/ubuntu disco/main arm64 gpg-agent arm64 2.2.12-1ubuntu3 [213 kB] Get:114 http://ftpmaster.internal/ubuntu disco/main arm64 libcomerr2 arm64 1.44.5-1 [2700 B] Get:115 http://ftpmaster.internal/ubuntu disco/main arm64 linux-libc-dev arm64 4.19.0-13.14 [1054 kB] Get:116 http://ftpmaster.internal/ubuntu disco/main arm64 optipng arm64 0.7.7-1 [81.2 kB] Get:117 http://ftpmaster.internal/ubuntu disco/main arm64 pkgbinarymangler all 144 [55.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 60.6 MB in 2s (26.0 MB/s) (Reading database ... 12642 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6.1_arm64.deb ... Unpacking debianutils (4.8.6.1) over (4.8.6) ... Setting up debianutils (4.8.6.1) ... (Reading database ... 12642 files and directories currently installed.) Preparing to unpack .../bash_5.0-2ubuntu1_arm64.deb ... Unpacking bash (5.0-2ubuntu1) over (4.4.18-2ubuntu3) ... Setting up bash (5.0-2ubuntu1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12642 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.33.1-0.1ubuntu1_arm64.deb ... Unpacking bsdutils (1:2.33.1-0.1ubuntu1) over (1:2.32-0.1ubuntu2) ... Setting up bsdutils (1:2.33.1-0.1ubuntu1) ... (Reading database ... 12642 files and directories currently installed.) Preparing to unpack .../coreutils_8.30-1ubuntu1_arm64.deb ... Unpacking coreutils (8.30-1ubuntu1) over (8.28-1ubuntu2) ... Setting up coreutils (8.30-1ubuntu1) ... 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Setting up libcc1-0:arm64 (9-20190216-1ubuntu1) ... Setting up e2fslibs:arm64 (1.44.5-1) ... Setting up libprocps7:arm64 (2:3.3.15-2ubuntu2) ... Setting up libpng16-16:arm64 (1.6.36-5) ... Setting up tzdata (2018i-1) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Feb 21 11:10:32 UTC 2019. Universal Time is now: Thu Feb 21 11:10:32 UTC 2019. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up init (1.56+nmu1) ... Setting up libtsan0:arm64 (9-20190216-1ubuntu1) ... Setting up linux-libc-dev:arm64 (4.19.0-13.14) ... Setting up libmpfr6:arm64 (4.0.2-1) ... Setting up e2fsprogs (1.44.5-1) ... Setting up optipng (0.7.7-1) ... Setting up lsb-base (10.2018112800ubuntu1) ... Setting up liblsan0:arm64 (9-20190216-1ubuntu1) ... Setting up libgdbm6:arm64 (1.18.1-3) ... Setting up binutils-common:arm64 (2.32-3ubuntu1) ... Setting up perl-modules-5.28 (5.28.1-4) ... Setting up xz-utils (5.2.4-1) ... Setting up gcc-8-base:arm64 (8.2.0-21ubuntu1) ... Setting up libsqlite3-0:arm64 (3.27.1-2) ... Setting up libcomerr2:arm64 (1.44.5-1) ... Setting up libgdbm-compat4:arm64 (1.18.1-3) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 2 added, 7 removed; done. Setting up libasan5:arm64 (9-20190216-1ubuntu1) ... Setting up libassuan0:arm64 (2.5.2-1) ... Setting up libncurses6:arm64 (6.1+20181013-2ubuntu2) ... Setting up libitm1:arm64 (9-20190216-1ubuntu1) ... Setting up libreadline8:arm64 (8.0-1) ... Setting up libubsan1:arm64 (9-20190216-1ubuntu1) ... Setting up cpp-8 (8.2.0-21ubuntu1) ... Setting up pkgbinarymangler (144) ... Setting up libbinutils:arm64 (2.32-3ubuntu1) ... Setting up libperl5.28:arm64 (5.28.1-4) ... Setting up gpgconf (2.2.12-1ubuntu3) ... Setting up gpg-agent (2.2.12-1ubuntu3) ... Setting up procps (2:3.3.15-2ubuntu2) ... Installing new version of config file /etc/sysctl.d/10-network-security.conf ... Setting up perl (5.28.1-4) ... Setting up binutils-aarch64-linux-gnu (2.32-3ubuntu1) ... Setting up libgcc-8-dev:arm64 (8.2.0-21ubuntu1) ... Setting up binutils (2.32-3ubuntu1) ... Setting up gpg (2.2.12-1ubuntu3) ... Setting up libstdc++-8-dev:arm64 (8.2.0-21ubuntu1) ... Setting up libdpkg-perl (1.19.4ubuntu3) ... Setting up gcc-8 (8.2.0-21ubuntu1) ... Setting up g++-8 (8.2.0-21ubuntu1) ... Setting up dpkg-dev (1.19.4ubuntu3) ... Processing triggers for systemd (240-6ubuntu1) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-16415077 arm64 disco-proposed -c chroot:build-PACKAGEBUILD-16415077 --arch=arm64 --dist=disco-proposed --nolog nco_4.7.9-1.dsc Initiating build PACKAGEBUILD-16415077 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-142-generic #168-Ubuntu SMP Wed Jan 16 21:00:53 UTC 2019 aarch64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-arm64-016.buildd +==============================================================================+ | nco 4.7.9-1 (arm64) 21 Feb 2019 11:10 | +==============================================================================+ Package: nco Version: 4.7.9-1 Source Version: 4.7.9-1 Distribution: disco-proposed Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 I: NOTICE: Log filtering will replace 'build/nco-f3bB7m/nco-4.7.9' with '<>' I: NOTICE: Log filtering will replace 'build/nco-f3bB7m' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-16415077/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- nco_4.7.9-1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-La3b3S/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-La3b3S/apt_archive ./ InRelease Get:2 copy:/<>/resolver-La3b3S/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-La3b3S/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-La3b3S/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-La3b3S/apt_archive ./ Packages [526 B] Fetched 2859 B in 0s (35.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 852 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-La3b3S/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 852 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12691 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 9), dh-autoreconf, autotools-dev, bison, flex, antlr, libantlr-dev, gsl-bin, libgsl-dev, netcdf-bin, libnetcdf-dev, libudunits2-dev, libdap-dev, texinfo Filtered Build-Depends: debhelper (>= 9), dh-autoreconf, autotools-dev, bison, flex, antlr, libantlr-dev, gsl-bin, libgsl-dev, netcdf-bin, libnetcdf-dev, libudunits2-dev, libdap-dev, texinfo dpkg-deb: building package 'sbuild-build-depends-nco-dummy' in '/<>/resolver-DR888H/apt_archive/sbuild-build-depends-nco-dummy.deb'. Ign:1 copy:/<>/resolver-DR888H/apt_archive ./ InRelease Get:2 copy:/<>/resolver-DR888H/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-DR888H/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-DR888H/apt_archive ./ Sources [276 B] Get:5 copy:/<>/resolver-DR888H/apt_archive ./ Packages [600 B] Fetched 2995 B in 0s (79.1 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install nco build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libreadline7 Use 'apt autoremove' to remove it. The following additional packages will be installed: antlr autoconf automake autopoint autotools-dev bison bsdmainutils ca-certificates-java debhelper default-jre-headless dh-autoreconf dh-strip-nondeterminism dwz file flex fontconfig-config fonts-dejavu-core gettext gettext-base groff-base gsl-bin hdf5-helpers icu-devtools intltool-debian java-common libaec-dev libaec0 libantlr-dev libantlr-java libarchive-zip-perl libasn1-8-heimdal libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libbsd0 libcroco3 libcups2 libcurl3-gnutls libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libdbus-1-3 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0 libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu-dev libicu63 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libnetcdf-dev libnetcdf13 libnghttp2-14 libnspr4 libnss3 libpcsclite1 libpipeline1 libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsz2 libtext-unidecode-perl libtool libuchardet0 libudunits2-0 libudunits2-data libudunits2-dev libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxml2-dev libxrender1 libxtst6 m4 man-db netcdf-bin openjdk-11-jre-headless pkg-config po-debconf tex-common texinfo ucf uuid-dev x11-common zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist whois vacation dh-make default-jre flex-doc gettext-doc libasprintf-dev libgettextpo-dev groff libasound2-plugins alsa-utils cups-common libcurl4-doc libgnutls28-dev libidn11-dev libkrb5-dev libldap2-dev librtmp-dev libssh2-1-dev gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user libhdf5-doc icu-doc liblcms2-utils netcdf-doc pcscd libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libnss-mdns fonts-dejavu-extra fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic libmail-box-perl texlive-base texlive-latex-base texlive-generic-recommended texinfo-doc-nonfree texlive-fonts-recommended Recommended packages: libfl-dev curl | wget | lynx dbus libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules libltdl-dev libwww-perl libxml-sax-expat-perl libmail-sendmail-perl The following NEW packages will be installed: antlr autoconf automake autopoint autotools-dev bison bsdmainutils ca-certificates-java debhelper default-jre-headless dh-autoreconf dh-strip-nondeterminism dwz file flex fontconfig-config fonts-dejavu-core gettext gettext-base groff-base gsl-bin hdf5-helpers icu-devtools intltool-debian java-common libaec-dev libaec0 libantlr-dev libantlr-java libarchive-zip-perl libasn1-8-heimdal libasound2 libasound2-data libavahi-client3 libavahi-common-data libavahi-common3 libbison-dev libbsd0 libcroco3 libcups2 libcurl3-gnutls libcurl4-gnutls-dev libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libdbus-1-3 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgfortran5 libglib2.0-0 libgsl-dev libgsl23 libgslcblas0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libhdf5-103 libhdf5-cpp-103 libhdf5-dev libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libicu-dev libicu63 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 liblcms2-2 libldap-2.4-2 libldap-common libmagic-mgc libmagic1 libnetcdf-dev libnetcdf13 libnghttp2-14 libnspr4 libnss3 libpcsclite1 libpipeline1 libpsl5 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsigsegv2 libssh-4 libsz2 libtext-unidecode-perl libtool libuchardet0 libudunits2-0 libudunits2-data libudunits2-dev libwind0-heimdal libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxi6 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml2 libxml2-dev libxrender1 libxtst6 m4 man-db netcdf-bin openjdk-11-jre-headless pkg-config po-debconf sbuild-build-depends-nco-dummy tex-common texinfo ucf uuid-dev x11-common zlib1g-dev 0 upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 81.0 MB of archives. After this operation, 362 MB of additional disk space will be used. 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[813 kB] Get:12 http://ftpmaster.internal/ubuntu disco/main arm64 libpipeline1 arm64 1.5.1-2 [24.4 kB] Get:13 http://ftpmaster.internal/ubuntu disco/main arm64 man-db arm64 2.8.5-2 [1085 kB] Get:14 http://ftpmaster.internal/ubuntu disco/main arm64 libsigsegv2 arm64 2.12-2 [13.3 kB] Get:15 http://ftpmaster.internal/ubuntu disco/main arm64 m4 arm64 1.4.18-2 [194 kB] Get:16 http://ftpmaster.internal/ubuntu disco/main arm64 flex arm64 2.6.4-6.2 [307 kB] Get:17 http://ftpmaster.internal/ubuntu disco/main arm64 ucf all 3.0038+nmu1 [51.6 kB] Get:18 http://ftpmaster.internal/ubuntu disco/main arm64 tex-common all 6.10 [32.6 kB] Get:19 http://ftpmaster.internal/ubuntu disco/main arm64 libmagic-mgc arm64 1:5.35-2 [200 kB] Get:20 http://ftpmaster.internal/ubuntu disco/main arm64 libmagic1 arm64 1:5.35-2 [70.5 kB] Get:21 http://ftpmaster.internal/ubuntu disco/main arm64 file arm64 1:5.35-2 [23.0 kB] Get:22 http://ftpmaster.internal/ubuntu disco/main arm64 libdbus-1-3 arm64 1.12.12-1ubuntu1 [169 kB] Get:23 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libelf1 arm64 0.176-1 [43.6 kB] Get:24 http://ftpmaster.internal/ubuntu disco/main arm64 libexpat1 arm64 2.2.6-1 [68.2 kB] Get:25 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libglib2.0-0 arm64 2.59.3-1 [1163 kB] Get:26 http://ftpmaster.internal/ubuntu disco/main arm64 libicu63 arm64 63.1-6 [8144 kB] Get:27 http://ftpmaster.internal/ubuntu disco/main arm64 libxml2 arm64 2.9.4+dfsg1-7ubuntu3 [562 kB] Get:28 http://ftpmaster.internal/ubuntu disco/main arm64 gettext-base arm64 0.19.8.1-9 [48.0 kB] Get:29 http://ftpmaster.internal/ubuntu disco/main arm64 libkrb5support0 arm64 1.17-1 [32.6 kB] Get:30 http://ftpmaster.internal/ubuntu disco/main arm64 libk5crypto3 arm64 1.17-1 [86.9 kB] Get:31 http://ftpmaster.internal/ubuntu disco/main arm64 libkeyutils1 arm64 1.6-2 [10.5 kB] Get:32 http://ftpmaster.internal/ubuntu disco/main arm64 libkrb5-3 arm64 1.17-1 [314 kB] Get:33 http://ftpmaster.internal/ubuntu 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Get:54 http://ftpmaster.internal/ubuntu disco/main arm64 libxrender1 arm64 1:0.9.10-1 [16.1 kB] Get:55 http://ftpmaster.internal/ubuntu disco/main arm64 x11-common all 1:7.7+19ubuntu9 [22.4 kB] Get:56 http://ftpmaster.internal/ubuntu disco/main arm64 libxtst6 arm64 2:1.2.3-1 [11.7 kB] Get:57 http://ftpmaster.internal/ubuntu disco/main arm64 openjdk-11-jre-headless arm64 11.0.2+9-3ubuntu1 [36.1 MB] Get:58 http://ftpmaster.internal/ubuntu disco/main arm64 default-jre-headless arm64 2:1.11-71 [3188 B] Get:59 http://ftpmaster.internal/ubuntu disco/universe arm64 libantlr-java all 2.7.7+dfsg-9.2build2 [450 kB] Get:60 http://ftpmaster.internal/ubuntu disco/universe arm64 antlr all 2.7.7+dfsg-9.2build2 [5092 B] Get:61 http://ftpmaster.internal/ubuntu disco/main arm64 autoconf all 2.69-11 [322 kB] Get:62 http://ftpmaster.internal/ubuntu disco/main arm64 autotools-dev all 20180224.1 [39.6 kB] Get:63 http://ftpmaster.internal/ubuntu disco/main arm64 automake all 1:1.16.1-4ubuntu3 [522 kB] Get:64 http://ftpmaster.internal/ubuntu disco/main arm64 autopoint all 0.19.8.1-9 [412 kB] Get:65 http://ftpmaster.internal/ubuntu disco/main arm64 libbison-dev arm64 2:3.3.2.dfsg-1 [348 kB] Get:66 http://ftpmaster.internal/ubuntu disco/main arm64 bison arm64 2:3.3.2.dfsg-1 [264 kB] Get:67 http://ftpmaster.internal/ubuntu disco/main arm64 libtool all 2.4.6-10 [194 kB] Get:68 http://ftpmaster.internal/ubuntu disco/main arm64 dh-autoreconf all 19 [16.1 kB] Get:69 http://ftpmaster.internal/ubuntu disco/main arm64 libarchive-zip-perl all 1.64-1 [84.9 kB] Get:70 http://ftpmaster.internal/ubuntu disco/main arm64 libfile-stripnondeterminism-perl all 1.1.1-1 [13.7 kB] Get:71 http://ftpmaster.internal/ubuntu disco/main arm64 dh-strip-nondeterminism all 1.1.1-1 [5200 B] Get:72 http://ftpmaster.internal/ubuntu disco/main arm64 dwz arm64 0.12-3 [71.8 kB] Get:73 http://ftpmaster.internal/ubuntu disco/main arm64 libcroco3 arm64 0.6.12-3 [76.8 kB] Get:74 http://ftpmaster.internal/ubuntu disco/main arm64 gettext arm64 0.19.8.1-9 [853 kB] Get:75 http://ftpmaster.internal/ubuntu disco/main arm64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:76 http://ftpmaster.internal/ubuntu disco/main arm64 po-debconf all 1.0.21 [233 kB] Get:77 http://ftpmaster.internal/ubuntu disco/main arm64 debhelper all 12ubuntu1 [887 kB] Get:78 http://ftpmaster.internal/ubuntu disco/universe arm64 libgslcblas0 arm64 2.5+dfsg-6 [52.4 kB] Get:79 http://ftpmaster.internal/ubuntu disco/universe arm64 libgsl23 arm64 2.5+dfsg-6 [737 kB] Get:80 http://ftpmaster.internal/ubuntu disco/universe arm64 gsl-bin arm64 2.5+dfsg-6 [11.0 kB] Get:81 http://ftpmaster.internal/ubuntu disco/universe arm64 hdf5-helpers arm64 1.10.4+repack-10 [13.9 kB] Get:82 http://ftpmaster.internal/ubuntu disco/main arm64 icu-devtools arm64 63.1-6 [170 kB] Get:83 http://ftpmaster.internal/ubuntu disco/universe arm64 libaec0 arm64 1.0.2-1 [17.8 kB] Get:84 http://ftpmaster.internal/ubuntu disco/universe arm64 libantlr-dev arm64 2.7.7+dfsg-9.2build2 [158 kB] Get:85 http://ftpmaster.internal/ubuntu disco/main arm64 libroken18-heimdal arm64 7.5.0+dfsg-2.1 [39.1 kB] Get:86 http://ftpmaster.internal/ubuntu disco/main arm64 libasn1-8-heimdal arm64 7.5.0+dfsg-2.1 [149 kB] Get:87 http://ftpmaster.internal/ubuntu disco/main arm64 libheimbase1-heimdal arm64 7.5.0+dfsg-2.1 [27.8 kB] Get:88 http://ftpmaster.internal/ubuntu disco/main arm64 libhcrypto4-heimdal arm64 7.5.0+dfsg-2.1 [85.2 kB] Get:89 http://ftpmaster.internal/ubuntu disco/main arm64 libwind0-heimdal arm64 7.5.0+dfsg-2.1 [47.4 kB] Get:90 http://ftpmaster.internal/ubuntu disco/main arm64 libhx509-5-heimdal arm64 7.5.0+dfsg-2.1 [99.4 kB] Get:91 http://ftpmaster.internal/ubuntu disco/main arm64 libkrb5-26-heimdal arm64 7.5.0+dfsg-2.1 [191 kB] Get:92 http://ftpmaster.internal/ubuntu disco/main arm64 libheimntlm0-heimdal arm64 7.5.0+dfsg-2.1 [14.7 kB] Get:93 http://ftpmaster.internal/ubuntu disco/main arm64 libgssapi3-heimdal arm64 7.5.0+dfsg-2.1 [88.2 kB] Get:94 http://ftpmaster.internal/ubuntu disco/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-1 [15.1 kB] Get:95 http://ftpmaster.internal/ubuntu disco/main arm64 libsasl2-2 arm64 2.1.27+dfsg-1 [48.8 kB] Get:96 http://ftpmaster.internal/ubuntu disco/main arm64 libldap-common all 2.4.47+dfsg-3ubuntu1 [16.5 kB] Get:97 http://ftpmaster.internal/ubuntu disco/main arm64 libldap-2.4-2 arm64 2.4.47+dfsg-3ubuntu1 [145 kB] Get:98 http://ftpmaster.internal/ubuntu disco/main arm64 libnghttp2-14 arm64 1.36.0-2 [76.0 kB] Get:99 http://ftpmaster.internal/ubuntu disco/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2 [49.8 kB] Get:100 http://ftpmaster.internal/ubuntu disco/main arm64 libssh-4 arm64 0.8.6-3 [175 kB] Get:101 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libcurl3-gnutls arm64 7.64.0-1ubuntu1 [212 kB] Get:102 http://ftpmaster.internal/ubuntu disco-proposed/main arm64 libcurl4-gnutls-dev arm64 7.64.0-1ubuntu1 [307 kB] Get:103 http://ftpmaster.internal/ubuntu disco/universe arm64 libdap25 arm64 3.20.2-1 [388 kB] Get:104 http://ftpmaster.internal/ubuntu disco/universe arm64 libdapserver7v5 arm64 3.20.2-1 [19.8 kB] Get:105 http://ftpmaster.internal/ubuntu disco/universe arm64 libdapclient6v5 arm64 3.20.2-1 [80.6 kB] Get:106 http://ftpmaster.internal/ubuntu disco/main arm64 libicu-dev arm64 63.1-6 [9050 kB] Get:107 http://ftpmaster.internal/ubuntu disco/main arm64 libxml2-dev arm64 2.9.4+dfsg1-7ubuntu3 [682 kB] Get:108 http://ftpmaster.internal/ubuntu disco/main arm64 uuid-dev arm64 2.33.1-0.1ubuntu1 [33.9 kB] Get:109 http://ftpmaster.internal/ubuntu disco/main arm64 pkg-config arm64 0.29.1-0ubuntu2 [42.8 kB] Get:110 http://ftpmaster.internal/ubuntu disco/universe arm64 libdap-dev arm64 3.20.2-1 [710 kB] Get:111 http://ftpmaster.internal/ubuntu disco/main arm64 libgfortran5 arm64 9-20190216-1ubuntu1 [331 kB] Get:112 http://ftpmaster.internal/ubuntu disco/universe arm64 libgsl-dev arm64 2.5+dfsg-6 [939 kB] Get:113 http://ftpmaster.internal/ubuntu disco/universe arm64 libsz2 arm64 1.0.2-1 [4948 B] Get:114 http://ftpmaster.internal/ubuntu disco/universe arm64 libhdf5-103 arm64 1.10.4+repack-10 [1145 kB] Get:115 http://ftpmaster.internal/ubuntu disco/universe arm64 libhdf5-cpp-103 arm64 1.10.4+repack-10 [108 kB] Get:116 http://ftpmaster.internal/ubuntu disco/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-1ubuntu2 [170 kB] Get:117 http://ftpmaster.internal/ubuntu disco/main arm64 libjpeg-turbo8-dev arm64 2.0.1-0ubuntu1 [214 kB] Get:118 http://ftpmaster.internal/ubuntu disco/main arm64 libjpeg8-dev arm64 8c-2ubuntu8 [1550 B] Get:119 http://ftpmaster.internal/ubuntu disco/main arm64 libjpeg-dev arm64 8c-2ubuntu8 [1546 B] Get:120 http://ftpmaster.internal/ubuntu disco/universe arm64 libaec-dev arm64 1.0.2-1 [15.5 kB] Get:121 http://ftpmaster.internal/ubuntu disco/universe arm64 libhdf5-dev arm64 1.10.4+repack-10 [2658 kB] Get:122 http://ftpmaster.internal/ubuntu disco/universe arm64 libnetcdf13 arm64 1:4.6.2-1build1 [331 kB] Get:123 http://ftpmaster.internal/ubuntu disco/universe arm64 libnetcdf-dev arm64 1:4.6.2-1build1 [38.8 kB] Get:124 http://ftpmaster.internal/ubuntu disco/universe arm64 libtext-unidecode-perl all 1.30-1 [99.0 kB] Get:125 http://ftpmaster.internal/ubuntu disco/universe arm64 libudunits2-data all 2.2.26-5 [18.8 kB] Get:126 http://ftpmaster.internal/ubuntu disco/universe arm64 libudunits2-0 arm64 2.2.26-5 [40.6 kB] Get:127 http://ftpmaster.internal/ubuntu disco/universe arm64 libudunits2-dev arm64 2.2.26-5 [356 kB] Get:128 http://ftpmaster.internal/ubuntu disco/main arm64 libxml-namespacesupport-perl all 1.12-1 [13.2 kB] Get:129 http://ftpmaster.internal/ubuntu disco/main arm64 libxml-sax-base-perl all 1.09-1 [18.8 kB] Get:130 http://ftpmaster.internal/ubuntu disco/main arm64 libxml-sax-perl all 1.00+dfsg-1.1~build1 [56.1 kB] Get:131 http://ftpmaster.internal/ubuntu disco/main arm64 libxml-libxml-perl arm64 2.0134+dfsg-1 [310 kB] Get:132 http://ftpmaster.internal/ubuntu disco/universe arm64 netcdf-bin arm64 1:4.6.2-1build1 [182 kB] Get:133 http://ftpmaster.internal/ubuntu disco/universe arm64 texinfo arm64 6.5.0.dfsg.1-4build1 [846 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 81.0 MB in 4s (21.4 MB/s) Selecting previously unselected package libxau6:arm64. (Reading database ... 12691 files and directories currently installed.) Preparing to unpack .../000-libxau6_1%3a1.0.8-1_arm64.deb ... Unpacking libxau6:arm64 (1:1.0.8-1) ... Selecting previously unselected package libbsd0:arm64. Preparing to unpack .../001-libbsd0_0.9.1-1_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-1) ... Selecting previously unselected package libxdmcp6:arm64. Preparing to unpack .../002-libxdmcp6_1%3a1.1.2-3_arm64.deb ... Unpacking libxdmcp6:arm64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:arm64. Preparing to unpack .../003-libxcb1_1.13.1-2_arm64.deb ... Unpacking libxcb1:arm64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../004-libx11-data_2%3a1.6.7-1_all.deb ... Unpacking libx11-data (2:1.6.7-1) ... Selecting previously unselected package libx11-6:arm64. Preparing to unpack .../005-libx11-6_2%3a1.6.7-1_arm64.deb ... Unpacking libx11-6:arm64 (2:1.6.7-1) ... Selecting previously unselected package libxext6:arm64. Preparing to unpack .../006-libxext6_2%3a1.3.3-1_arm64.deb ... Unpacking libxext6:arm64 (2:1.3.3-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../007-bsdmainutils_11.1.2ubuntu2_arm64.deb ... Unpacking bsdmainutils (11.1.2ubuntu2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../008-libuchardet0_0.0.6-3_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.22.4-2_arm64.deb ... Unpacking groff-base (1.22.4-2) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../010-libpipeline1_1.5.1-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../011-man-db_2.8.5-2_arm64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../012-libsigsegv2_2.12-2_arm64.deb ... Unpacking libsigsegv2:arm64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.18-2_arm64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package flex. Preparing to unpack .../014-flex_2.6.4-6.2_arm64.deb ... Unpacking flex (2.6.4-6.2) ... Selecting previously unselected package ucf. Preparing to unpack .../015-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package tex-common. Preparing to unpack .../016-tex-common_6.10_all.deb ... Unpacking tex-common (6.10) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../017-libmagic-mgc_1%3a5.35-2_arm64.deb ... Unpacking libmagic-mgc (1:5.35-2) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../018-libmagic1_1%3a5.35-2_arm64.deb ... Unpacking libmagic1:arm64 (1:5.35-2) ... Selecting previously unselected package file. Preparing to unpack .../019-file_1%3a5.35-2_arm64.deb ... Unpacking file (1:5.35-2) ... Selecting previously unselected package libdbus-1-3:arm64. Preparing to unpack .../020-libdbus-1-3_1.12.12-1ubuntu1_arm64.deb ... Unpacking libdbus-1-3:arm64 (1.12.12-1ubuntu1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../021-libelf1_0.176-1_arm64.deb ... Unpacking libelf1:arm64 (0.176-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../022-libexpat1_2.2.6-1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.6-1) ... Selecting previously unselected package libglib2.0-0:arm64. Preparing to unpack .../023-libglib2.0-0_2.59.3-1_arm64.deb ... Unpacking libglib2.0-0:arm64 (2.59.3-1) ... Selecting previously unselected package libicu63:arm64. Preparing to unpack .../024-libicu63_63.1-6_arm64.deb ... Unpacking libicu63:arm64 (63.1-6) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../025-libxml2_2.9.4+dfsg1-7ubuntu3_arm64.deb ... Unpacking libxml2:arm64 (2.9.4+dfsg1-7ubuntu3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../026-gettext-base_0.19.8.1-9_arm64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../027-libkrb5support0_1.17-1_arm64.deb ... Unpacking libkrb5support0:arm64 (1.17-1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../028-libk5crypto3_1.17-1_arm64.deb ... Unpacking libk5crypto3:arm64 (1.17-1) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../029-libkeyutils1_1.6-2_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6-2) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../030-libkrb5-3_1.17-1_arm64.deb ... Unpacking libkrb5-3:arm64 (1.17-1) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../031-libgssapi-krb5-2_1.17-1_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.17-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../032-libpsl5_0.20.2-2_arm64.deb ... Unpacking libpsl5:arm64 (0.20.2-2) ... Selecting previously unselected package libnspr4:arm64. Preparing to unpack .../033-libnspr4_2%3a4.20-1ubuntu1_arm64.deb ... Unpacking libnspr4:arm64 (2:4.20-1ubuntu1) ... Selecting previously unselected package libnss3:arm64. Preparing to unpack .../034-libnss3_2%3a3.42-1ubuntu2_arm64.deb ... Unpacking libnss3:arm64 (2:3.42-1ubuntu2) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../035-ca-certificates-java_20180516ubuntu1_all.deb ... Unpacking ca-certificates-java (20180516ubuntu1) ... Selecting previously unselected package java-common. Preparing to unpack .../036-java-common_0.71_all.deb ... Unpacking java-common (0.71) ... Selecting previously unselected package libavahi-common-data:arm64. Preparing to unpack .../037-libavahi-common-data_0.7-4ubuntu5_arm64.deb ... Unpacking libavahi-common-data:arm64 (0.7-4ubuntu5) ... Selecting previously unselected package libavahi-common3:arm64. Preparing to unpack .../038-libavahi-common3_0.7-4ubuntu5_arm64.deb ... Unpacking libavahi-common3:arm64 (0.7-4ubuntu5) ... Selecting previously unselected package libavahi-client3:arm64. Preparing to unpack .../039-libavahi-client3_0.7-4ubuntu5_arm64.deb ... Unpacking libavahi-client3:arm64 (0.7-4ubuntu5) ... Selecting previously unselected package libcups2:arm64. Preparing to unpack .../040-libcups2_2.2.10-4_arm64.deb ... Unpacking libcups2:arm64 (2.2.10-4) ... Selecting previously unselected package liblcms2-2:arm64. Preparing to unpack .../041-liblcms2-2_2.9-3_arm64.deb ... Unpacking liblcms2-2:arm64 (2.9-3) ... Selecting previously unselected package libjpeg-turbo8:arm64. Preparing to unpack .../042-libjpeg-turbo8_2.0.1-0ubuntu1_arm64.deb ... Unpacking libjpeg-turbo8:arm64 (2.0.1-0ubuntu1) ... Selecting previously unselected package libjpeg8:arm64. Preparing to unpack .../043-libjpeg8_8c-2ubuntu8_arm64.deb ... Unpacking libjpeg8:arm64 (8c-2ubuntu8) ... Selecting previously unselected package libfreetype6:arm64. Preparing to unpack .../044-libfreetype6_2.9.1-3_arm64.deb ... Unpacking libfreetype6:arm64 (2.9.1-3) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../045-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../046-fontconfig-config_2.13.1-2ubuntu2_all.deb ... Unpacking fontconfig-config (2.13.1-2ubuntu2) ... Selecting previously unselected package libfontconfig1:arm64. Preparing to unpack .../047-libfontconfig1_2.13.1-2ubuntu2_arm64.deb ... Unpacking libfontconfig1:arm64 (2.13.1-2ubuntu2) ... Selecting previously unselected package libasound2-data. Preparing to unpack .../048-libasound2-data_1.1.8-1_all.deb ... Unpacking libasound2-data (1.1.8-1) ... Selecting previously unselected package libasound2:arm64. Preparing to unpack .../049-libasound2_1.1.8-1_arm64.deb ... Unpacking libasound2:arm64 (1.1.8-1) ... Selecting previously unselected package libpcsclite1:arm64. Preparing to unpack .../050-libpcsclite1_1.8.24-1_arm64.deb ... Unpacking libpcsclite1:arm64 (1.8.24-1) ... Selecting previously unselected package libxi6:arm64. Preparing to unpack .../051-libxi6_2%3a1.7.9-1_arm64.deb ... Unpacking libxi6:arm64 (2:1.7.9-1) ... Selecting previously unselected package libxrender1:arm64. Preparing to unpack .../052-libxrender1_1%3a0.9.10-1_arm64.deb ... Unpacking libxrender1:arm64 (1:0.9.10-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../053-x11-common_1%3a7.7+19ubuntu9_all.deb ... dpkg-query: no packages found matching nux-tools Unpacking x11-common (1:7.7+19ubuntu9) ... Selecting previously unselected package libxtst6:arm64. Preparing to unpack .../054-libxtst6_2%3a1.2.3-1_arm64.deb ... Unpacking libxtst6:arm64 (2:1.2.3-1) ... Selecting previously unselected package openjdk-11-jre-headless:arm64. Preparing to unpack .../055-openjdk-11-jre-headless_11.0.2+9-3ubuntu1_arm64.deb ... Unpacking openjdk-11-jre-headless:arm64 (11.0.2+9-3ubuntu1) ... Selecting previously unselected package default-jre-headless. Preparing to unpack .../056-default-jre-headless_2%3a1.11-71_arm64.deb ... Unpacking default-jre-headless (2:1.11-71) ... Selecting previously unselected package libantlr-java. Preparing to unpack .../057-libantlr-java_2.7.7+dfsg-9.2build2_all.deb ... Unpacking libantlr-java (2.7.7+dfsg-9.2build2) ... Selecting previously unselected package antlr. Preparing to unpack .../058-antlr_2.7.7+dfsg-9.2build2_all.deb ... Unpacking antlr (2.7.7+dfsg-9.2build2) ... Selecting previously unselected package autoconf. Preparing to unpack .../059-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../060-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../061-automake_1%3a1.16.1-4ubuntu3_all.deb ... Unpacking automake (1:1.16.1-4ubuntu3) ... Selecting previously unselected package autopoint. Preparing to unpack .../062-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libbison-dev:arm64. Preparing to unpack .../063-libbison-dev_2%3a3.3.2.dfsg-1_arm64.deb ... Unpacking libbison-dev:arm64 (2:3.3.2.dfsg-1) ... Selecting previously unselected package bison. 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Unpacking netcdf-bin (1:4.6.2-1build1) ... Selecting previously unselected package texinfo. Preparing to unpack .../131-texinfo_6.5.0.dfsg.1-4build1_arm64.deb ... Unpacking texinfo (6.5.0.dfsg.1-4build1) ... Selecting previously unselected package sbuild-build-depends-nco-dummy. Preparing to unpack .../132-sbuild-build-depends-nco-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-nco-dummy (0.invalid.0) ... Setting up libantlr-dev (2.7.7+dfsg-9.2build2) ... Setting up libantlr-java (2.7.7+dfsg-9.2build2) ... Setting up libaec0:arm64 (1.0.2-1) ... Setting up libexpat1:arm64 (2.2.6-1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libnghttp2-14:arm64 (1.36.0-2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libicu63:arm64 (63.1-6) ... Setting up liblcms2-2:arm64 (2.9-3) ... Setting up libpcsclite1:arm64 (1.8.24-1) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up libldap-common (2.4.47+dfsg-3ubuntu1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libpsl5:arm64 (0.20.2-2) ... Setting up libelf1:arm64 (0.176-1) ... Setting up libglib2.0-0:arm64 (2.59.3-1) ... No schema files found: doing nothing. Setting up libasound2-data (1.1.8-1) ... Setting up libtext-unidecode-perl (1.30-1) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-1) ... Setting up java-common (0.71) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-1) ... Setting up uuid-dev:arm64 (2.33.1-0.1ubuntu1) ... Setting up libudunits2-data (2.2.26-5) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libjpeg-turbo8:arm64 (2.0.1-0ubuntu1) ... Setting up libpipeline1:arm64 (1.5.1-2) ... Setting up libroken18-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2) ... Setting up m4 (1.4.18-2) ... Setting up libbsd0:arm64 (0.9.1-1) ... Setting up libkrb5support0:arm64 (1.17-1) ... Setting up libnspr4:arm64 (2:4.20-1ubuntu1) ... Setting up ucf (3.0038+nmu1) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7ubuntu3) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libfreetype6:arm64 (2.9.1-3) ... Setting up libmagic-mgc (1:5.35-2) ... Setting up libasound2:arm64 (1.1.8-1) ... Setting up libmagic1:arm64 (1:5.35-2) ... Setting up libcroco3:arm64 (0.6.12-3) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up pkg-config (0.29.1-0ubuntu2) ... Setting up libjpeg-turbo8-dev:arm64 (2.0.1-0ubuntu1) ... Setting up dwz (0.12-3) ... Setting up autotools-dev (20180224.1) ... Setting up libheimbase1-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up libbison-dev:arm64 (2:3.3.2.dfsg-1) ... Setting up icu-devtools (63.1-6) ... Setting up bison (2:3.3.2.dfsg-1) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up libxdmcp6:arm64 (1:1.1.2-3) ... Setting up libkeyutils1:arm64 (1.6-2) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up x11-common (1:7.7+19ubuntu9) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libgslcblas0:arm64 (2.5+dfsg-6) ... Setting up libgfortran5:arm64 (9-20190216-1ubuntu1) ... Setting up hdf5-helpers (1.10.4+repack-10) ... Setting up libx11-data (2:1.6.7-1) ... Setting up libxau6:arm64 (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libdbus-1-3:arm64 (1.12.12-1ubuntu1) ... Setting up libavahi-common-data:arm64 (0.7-4ubuntu5) ... Setting up libsz2:arm64 (1.0.2-1) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-1ubuntu2) ... Setting up libudunits2-0:arm64 (2.2.26-5) ... Setting up libfile-stripnondeterminism-perl (1.1.1-1) ... Setting up libxml-sax-perl (1.00+dfsg-1.1~build1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libjpeg8:arm64 (8c-2ubuntu8) ... Setting up libk5crypto3:arm64 (1.17-1) ... Setting up libdap25:arm64 (3.20.2-1) ... Setting up fontconfig-config (2.13.1-2ubuntu2) ... Setting up tex-common (6.10) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libwind0-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up libgsl23:arm64 (2.5+dfsg-6) ... Setting up gettext (0.19.8.1-9) ... Setting up flex (2.6.4-6.2) ... Setting up libgsl-dev (2.5+dfsg-6) ... Setting up libasn1-8-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up groff-base (1.22.4-2) ... Setting up libhcrypto4-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up libaec-dev:arm64 (1.0.2-1) ... Setting up libnss3:arm64 (2:3.42-1ubuntu2) ... Setting up autoconf (2.69-11) ... Setting up libicu-dev:arm64 (63.1-6) ... Setting up libhdf5-103:arm64 (1.10.4+repack-10) ... Setting up file (1:5.35-2) ... Setting up libhx509-5-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up libxml2-dev:arm64 (2.9.4+dfsg1-7ubuntu3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libjpeg8-dev:arm64 (8c-2ubuntu8) ... Setting up libjpeg-dev:arm64 (8c-2ubuntu8) ... Setting up libdapserver7v5:arm64 (3.20.2-1) ... Setting up automake (1:1.16.1-4ubuntu3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libudunits2-dev:arm64 (2.2.26-5) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libkrb5-3:arm64 (1.17-1) ... Setting up libavahi-common3:arm64 (0.7-4ubuntu5) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libkrb5-26-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up libxcb1:arm64 (1.13.1-2) ... Setting up libheimntlm0-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up gsl-bin (2.5+dfsg-6) ... Setting up libtool (2.4.6-10) ... Setting up libfontconfig1:arm64 (2.13.1-2ubuntu2) ... Setting up po-debconf (1.0.21) ... Setting up libx11-6:arm64 (2:1.6.7-1) ... Setting up libhdf5-cpp-103:arm64 (1.10.4+repack-10) ... Setting up libhdf5-dev (1.10.4+repack-10) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libgssapi-krb5-2:arm64 (1.17-1) ... Setting up libssh-4:arm64 (0.8.6-3) ... Setting up libxrender1:arm64 (1:0.9.10-1) ... Setting up libavahi-client3:arm64 (0.7-4ubuntu5) ... Setting up texinfo (6.5.0.dfsg.1-4build1) ... Setting up libgssapi3-heimdal:arm64 (7.5.0+dfsg-2.1) ... Setting up libcups2:arm64 (2.2.10-4) ... Setting up libxext6:arm64 (2:1.3.3-1) ... Setting up libxtst6:arm64 (2:1.2.3-1) ... Setting up libldap-2.4-2:arm64 (2.4.47+dfsg-3ubuntu1) ... Setting up libxi6:arm64 (2:1.7.9-1) ... Setting up libcurl3-gnutls:arm64 (7.64.0-1ubuntu1) ... Setting up libdapclient6v5:arm64 (3.20.2-1) ... Setting up libnetcdf13:arm64 (1:4.6.2-1build1) ... Setting up libcurl4-gnutls-dev:arm64 (7.64.0-1ubuntu1) ... Setting up libnetcdf-dev (1:4.6.2-1build1) ... Setting up netcdf-bin (1:4.6.2-1build1) ... Setting up libdap-dev:arm64 (3.20.2-1) ... Setting up openjdk-11-jre-headless:arm64 (11.0.2+9-3ubuntu1) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-arm64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up default-jre-headless (2:1.11-71) ... Setting up ca-certificates-java (20180516ubuntu1) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory Adding debian:AddTrust_External_Root.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:SecureSign_RootCA11.pem Adding debian:DST_Root_CA_X3.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G3.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:Izenpe.com.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:thawte_Primary_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:thawte_Primary_Root_CA_-_G3.pem Adding debian:LuxTrust_Global_Root_2.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:AffirmTrust_Networking.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:GeoTrust_Primary_Certification_Authority.pem Adding debian:TrustCor_ECA-1.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:Certinomis_-_Root_CA.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G4.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:GeoTrust_Universal_CA_2.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:Deutsche_Telekom_Root_CA_2.pem Adding debian:EC-ACC.pem Adding debian:VeriSign_Class_3_Public_Primary_Certification_Authority_-_G5.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GA_CA.pem Adding debian:Certplus_Class_2_Primary_CA.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:SecureTrust_CA.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Certigna.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:GeoTrust_Universal_CA.pem Adding debian:EE_Certification_Centre_Root_CA.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:ACCVRAIZ1.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:ISRG_Root_X1.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Verisign_Class_3_Public_Primary_Certification_Authority_-_G3.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:GeoTrust_Global_CA.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:thawte_Primary_Root_CA_-_G2.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Taiwan_GRCA.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:Starfield_Class_2_CA.pem done. Setting up dh-autoreconf (19) ... Setting up antlr (2.7.7+dfsg-9.2build2) ... Setting up dh-strip-nondeterminism (1.1.1-1) ... Setting up debhelper (12ubuntu1) ... Setting up sbuild-build-depends-nco-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.28-0ubuntu1) ... Processing triggers for systemd (240-6ubuntu1) ... Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-142-generic arm64 (aarch64) Toolchain package versions: binutils_2.32-3ubuntu1 dpkg-dev_1.19.4ubuntu3 g++-8_8.2.0-21ubuntu1 gcc-8_8.2.0-21ubuntu1 libc6-dev_2.28-0ubuntu1 libstdc++-8-dev_8.2.0-21ubuntu1 libstdc++6_9-20190216-1ubuntu1 linux-libc-dev_4.19.0-13.14 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-1 antlr_2.7.7+dfsg-9.2build2 apt_1.8.0~rc3ubuntu1 autoconf_2.69-11 automake_1:1.16.1-4ubuntu3 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1ubuntu8 base-passwd_3.5.46 bash_5.0-2ubuntu1 binutils_2.32-3ubuntu1 binutils-aarch64-linux-gnu_2.32-3ubuntu1 binutils-common_2.32-3ubuntu1 bison_2:3.3.2.dfsg-1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.33.1-0.1ubuntu1 build-essential_12.5ubuntu2 bzip2_1.0.6-9 ca-certificates_20190110 ca-certificates-java_20180516ubuntu1 coreutils_8.30-1ubuntu1 cpp_4:8.2.0-2ubuntu2 cpp-8_8.2.0-21ubuntu1 dash_0.5.10.2-4ubuntu1 debconf_1.5.70 debhelper_12ubuntu1 debianutils_4.8.6.1 default-jre-headless_2:1.11-71 dh-autoreconf_19 dh-strip-nondeterminism_1.1.1-1 diffutils_1:3.7-2 dmsetup_2:1.02.145-4.1ubuntu4 dpkg_1.19.4ubuntu3 dpkg-dev_1.19.4ubuntu3 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1ubuntu1 file_1:5.35-2 findutils_4.6.0+git+20190209-2 flex_2.6.4-6.2 fontconfig-config_2.13.1-2ubuntu2 fonts-dejavu-core_2.37-1 g++_4:8.2.0-2ubuntu2 g++-8_8.2.0-21ubuntu1 gcc_4:8.2.0-2ubuntu2 gcc-8_8.2.0-21ubuntu1 gcc-8-base_8.2.0-21ubuntu1 gcc-9-base_9-20190216-1ubuntu1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpg_2.2.12-1ubuntu3 gpg-agent_2.2.12-1ubuntu3 gpgconf_2.2.12-1ubuntu3 gpgv_2.2.12-1ubuntu3 grep_3.3-1 groff-base_1.22.4-2 gsl-bin_2.5+dfsg-6 gzip_1.9-3 hdf5-helpers_1.10.4+repack-10 hostname_3.21 icu-devtools_63.1-6 init_1.56+nmu1 init-system-helpers_1.56+nmu1 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.5 java-common_0.71 libacl1_2.2.52-5 libaec-dev_1.0.2-1 libaec0_1.0.2-1 libantlr-dev_2.7.7+dfsg-9.2build2 libantlr-java_2.7.7+dfsg-9.2build2 libapparmor1_2.12-4ubuntu10 libapt-pkg5.0_1.8.0~rc3ubuntu1 libarchive-zip-perl_1.64-1 libargon2-1_0~20171227-0.2 libasan5_9-20190216-1ubuntu1 libasn1-8-heimdal_7.5.0+dfsg-2.1 libasound2_1.1.8-1 libasound2-data_1.1.8-1 libassuan0_2.5.2-1 libatomic1_9-20190216-1ubuntu1 libattr1_1:2.4.47-4 libaudit-common_1:2.8.3-1ubuntu3 libaudit1_1:2.8.3-1ubuntu3 libavahi-client3_0.7-4ubuntu5 libavahi-common-data_0.7-4ubuntu5 libavahi-common3_0.7-4ubuntu5 libbinutils_2.32-3ubuntu1 libbison-dev_2:3.3.2.dfsg-1 libblkid1_2.33.1-0.1ubuntu1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-0ubuntu1 libc-dev-bin_2.28-0ubuntu1 libc6_2.28-0ubuntu1 libc6-dev_2.28-0ubuntu1 libcap-ng0_0.7.9-2 libcap2_1:2.25-2 libcc1-0_9-20190216-1ubuntu1 libcom-err2_1.44.5-1 libcomerr2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.1.0-1ubuntu1 libcups2_2.2.10-4 libcurl3-gnutls_7.64.0-1ubuntu1 libcurl4-gnutls-dev_7.64.0-1ubuntu1 libdap-dev_3.20.2-1 libdap25_3.20.2-1 libdapclient6v5_3.20.2-1 libdapserver7v5_3.20.2-1 libdb5.3_5.3.28+dfsg1-0.3 libdbus-1-3_1.12.12-1ubuntu1 libdebconfclient0_0.247ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu4 libdpkg-perl_1.19.4ubuntu3 libelf1_0.176-1 libexpat1_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1ubuntu1 libffi6_3.2.1-9 libfile-stripnondeterminism-perl_1.1.1-1 libfontconfig1_2.13.1-2ubuntu2 libfreetype6_2.9.1-3 libgcc-8-dev_8.2.0-21ubuntu1 libgcc1_1:9-20190216-1ubuntu1 libgcrypt20_1.8.4-3ubuntu1 libgdbm-compat4_1.18.1-3 libgdbm6_1.18.1-3 libgfortran5_9-20190216-1ubuntu1 libglib2.0-0_2.59.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2ubuntu1 libgomp1_9-20190216-1ubuntu1 libgpg-error0_1.35-1 libgsl-dev_2.5+dfsg-6 libgsl23_2.5+dfsg-6 libgslcblas0_2.5+dfsg-6 libgssapi-krb5-2_1.17-1 libgssapi3-heimdal_7.5.0+dfsg-2.1 libhcrypto4-heimdal_7.5.0+dfsg-2.1 libhdf5-103_1.10.4+repack-10 libhdf5-cpp-103_1.10.4+repack-10 libhdf5-dev_1.10.4+repack-10 libheimbase1-heimdal_7.5.0+dfsg-2.1 libheimntlm0-heimdal_7.5.0+dfsg-2.1 libhogweed4_3.4.1-1 libhx509-5-heimdal_7.5.0+dfsg-2.1 libicu-dev_63.1-6 libicu63_63.1-6 libidn11_1.33-2.2ubuntu1 libidn2-0_2.0.5-1 libip4tc0_1.8.2-3ubuntu1 libisl19_0.20-2 libitm1_9-20190216-1ubuntu1 libjpeg-dev_8c-2ubuntu8 libjpeg-turbo8_2.0.1-0ubuntu1 libjpeg-turbo8-dev_2.0.1-0ubuntu1 libjpeg8_8c-2ubuntu8 libjpeg8-dev_8c-2ubuntu8 libjson-c3_0.12.1+ds-2 libk5crypto3_1.17-1 libkeyutils1_1.6-2 libkmod2_25-1ubuntu2 libkrb5-26-heimdal_7.5.0+dfsg-2.1 libkrb5-3_1.17-1 libkrb5support0_1.17-1 liblcms2-2_2.9-3 libldap-2.4-2_2.4.47+dfsg-3ubuntu1 libldap-common_2.4.47+dfsg-3ubuntu1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_9-20190216-1ubuntu1 liblz4-1_1.8.3-1ubuntu1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-2 libmagic1_1:5.35-2 libmount1_2.33.1-0.1ubuntu1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses6_6.1+20181013-2ubuntu2 libncursesw6_6.1+20181013-2ubuntu2 libnetcdf-dev_1:4.6.2-1build1 libnetcdf13_1:4.6.2-1build1 libnettle6_3.4.1-1 libnghttp2-14_1.36.0-2 libnpth0_1.6-1 libnspr4_2:4.20-1ubuntu1 libnss3_2:3.42-1ubuntu2 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5ubuntu1 libpam-modules-bin_1.3.1-5ubuntu1 libpam-runtime_1.3.1-5ubuntu1 libpam0g_1.3.1-5ubuntu1 libpcre3_2:8.39-11 libpcsclite1_1.8.24-1 libperl5.28_5.28.1-4 libpipeline1_1.5.1-2 libpng16-16_1.6.36-5 libprocps7_2:3.3.15-2ubuntu2 libpsl5_0.20.2-2 libreadline7_7.0-5 libreadline8_8.0-1 libroken18-heimdal_7.5.0+dfsg-2.1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-3ubuntu2 libselinux1_2.8-1build2 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsmartcols1_2.33.1-0.1ubuntu1 libsqlite3-0_3.27.1-2 libss2_1.44.5-1 libssh-4_0.8.6-3 libssl1.1_1.1.1a-1ubuntu2 libstdc++-8-dev_8.2.0-21ubuntu1 libstdc++6_9-20190216-1ubuntu1 libsystemd0_240-6ubuntu1 libsz2_1.0.2-1 libtasn1-6_4.13-3 libtext-unidecode-perl_1.30-1 libtinfo6_6.1+20181013-2ubuntu2 libtool_2.4.6-10 libtsan0_9-20190216-1ubuntu1 libubsan1_9-20190216-1ubuntu1 libuchardet0_0.0.6-3 libudev1_240-6ubuntu1 libudunits2-0_2.2.26-5 libudunits2-data_2.2.26-5 libudunits2-dev_2.2.26-5 libunistring2_0.9.10-1ubuntu1 libusb-0.1-4_2:0.1.12-32 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1ubuntu1 libwind0-heimdal_7.5.0+dfsg-2.1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libxau6_1:1.0.8-1 libxcb1_1.13.1-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1 libxi6_2:1.7.9-1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1.1~build1 libxml2_2.9.4+dfsg1-7ubuntu3 libxml2-dev_2.9.4+dfsg1-7ubuntu3 libxrender1_1:0.9.10-1 libxtst6_2:1.2.3-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.0-13.14 lockfile-progs_0.1.18 login_1:4.5-1.1ubuntu1 lsb-base_10.2018112800ubuntu1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17ubuntu3 mount_2.33.1-0.1ubuntu1 multiarch-support_2.28-0ubuntu1 ncurses-base_6.1+20181013-2ubuntu2 ncurses-bin_6.1+20181013-2ubuntu2 netcdf-bin_1:4.6.2-1build1 openjdk-11-jre-headless_11.0.2+9-3ubuntu1 openssl_1.1.1a-1ubuntu2 optipng_0.7.7-1 passwd_1:4.5-1.1ubuntu1 patch_2.7.6-3 perl_5.28.1-4 perl-base_5.28.1-4 perl-modules-5.28_5.28.1-4 pinentry-curses_1.1.0-1build2 pkg-config_0.29.1-0ubuntu2 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu2 readline-common_8.0-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-nco-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 systemd_240-6ubuntu1 systemd-sysv_240-6ubuntu1 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu2 tar_1.30+dfsg-5 tex-common_6.10 texinfo_6.5.0.dfsg.1-4build1 tzdata_2018i-1 ubuntu-keyring_2018.09.18.1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1ubuntu1 uuid-dev_2.33.1-0.1ubuntu1 x11-common_1:7.7+19ubuntu9 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1ubuntu2 zlib1g-dev_1:1.2.11.dfsg-1ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Feb 21 06:10:45 2019 UTC gpgv: using RSA key 8182DE417056408D614650D16750F10AE88D4AF1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./nco_4.7.9-1.dsc dpkg-source: info: extracting nco in nco-4.7.9 dpkg-source: info: unpacking nco_4.7.9.orig.tar.gz dpkg-source: info: unpacking nco_4.7.9-1.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-16415077 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-16415077 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-16415077 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package nco dpkg-buildpackage: info: source version 4.7.9-1 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with autoreconf \ --buildsystem autoconf \ --parallel dh_auto_clean -O--buildsystem=autoconf -O--parallel dh_autoreconf_clean -O--buildsystem=autoconf -O--parallel debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean data/big.nc \ data/in_1.nc \ data/in_2.nc \ data/nco_bm.stderr \ debian/rules.old \ doc/nco.info \ doc/nco.info-1 \ doc/nco.info-2 \ doc/nco.info-3 make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch --with autoreconf \ --buildsystem autoconf \ --parallel dh_update_autotools_config -a -O--buildsystem=autoconf -O--parallel dh_autoreconf -a -O--buildsystem=autoconf -O--parallel libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'autobld'. libtoolize: copying file 'autobld/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:175: installing 'autobld/compile' configure.ac:161: installing 'autobld/missing' src/nco++/Makefile.am: installing 'autobld/depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- \ --libdir=/usr/lib/nco \ --disable-nco_cplusplus \ --disable-static \ --disable-udunits \ --enable-dap \ --enable-gsl \ --enable-ncap2 \ --enable-netcdf4 \ --enable-udunits2 ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --libexecdir=\${prefix}/lib/aarch64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --libdir=/usr/lib/nco --disable-nco_cplusplus --disable-static --disable-udunits --enable-dap --enable-gsl --enable-ncap2 --enable-netcdf4 --enable-udunits2 checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking target system type... aarch64-unknown-linux-gnu ./configure: line 3015: git: command not found checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking how to run the C preprocessor... gcc -E checking how to run the C++ preprocessor... g++ -E checking for gcc option to accept ISO C99... none needed checking for gcc option to accept ISO Standard C... (cached) none needed checking for flex... flex checking lex output file root... lex.yy checking lex library... none needed checking whether yytext is a pointer... no checking whether ln -s works... yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether to enable maintainer-specific portions of Makefiles... no checking for working memcmp... yes checking whether lstat correctly handles trailing slash... yes checking whether stat accepts an empty string... no checking for working strtod... yes checking for canonicalize_file_name... yes checking for floor... no checking for gethostname... yes checking for getpagesize... yes checking for getrusage... yes checking for memchr... yes checking for memmove... yes checking for memset... yes checking for mkstemp... yes checking for pow... no checking for readlink... yes checking for realpath... yes checking for regcomp... yes checking for setlocale... yes checking for sqrt... no checking for strchr... yes checking for strerror... yes checking for strpbrk... yes checking for strrchr... yes checking for strstr... yes checking for strtol... yes checking for ANSI C header files... (cached) yes checking getopt.h usability... yes checking getopt.h presence... yes checking for getopt.h... yes checking libintl.h usability... yes checking libintl.h presence... yes checking for libintl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking for unistd.h... (cached) yes checking cstdlib usability... yes checking cstdlib presence... yes checking for cstdlib... yes checking for an ANSI C-conforming const... yes checking for inline... inline checking for pid_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for ptrdiff_t... yes checking size of int*... 8 checking whether C++ compiler implements namespaces... yes checking whether C++ compiler has working valarray... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no ################################# # Test for netCDF # ################################ checking netcdf.h usability... yes checking netcdf.h presence... yes checking for netcdf.h... yes checking for nc_open in -lnetcdf... yes ################################# # Test for netCDF4 support # ################################# checking whether NC_CHUNKED is declared... yes configure: netcdf.h contains netCDF4 definitions checking for nc_def_var_chunking in -lnetcdf... yes configure: Good news: Simple program compiles and links to netCDF4 library checking netcdf_mem.h usability... no checking netcdf_mem.h presence... yes configure: WARNING: netcdf_mem.h: present but cannot be compiled configure: WARNING: netcdf_mem.h: check for missing prerequisite headers? configure: WARNING: netcdf_mem.h: see the Autoconf documentation configure: WARNING: netcdf_mem.h: section "Present But Cannot Be Compiled" configure: WARNING: netcdf_mem.h: proceeding with the compiler's result configure: WARNING: ## --------------------------------------------- ## configure: WARNING: ## Report this to nco-bugs@lists.sourceforge.net ## configure: WARNING: ## --------------------------------------------- ## checking for netcdf_mem.h... no checking for gcc option to support OpenMP... -fopenmp configure: OpenMP support enabled Beginning generic tests for DAP support Testing for DAP-netCDF support (is DAP in libnetcdf.a?)... checking for daperror in -lnetcdf... yes configure: DAP support enabled checking for getopt_long... yes checking for _g95_ac_array in -lf95... no checking for sin in -lm... yes checking for sinf in -lsunmath... no checking for gettext in -lintl... no checking for res_init in -lresolv... no checking for main in -lsocket... no checking for main in -lthread... no checking for nco_open in -lnco... no checking for nc_inq_format... yes checking for nc_inq_path... yes checking for nc_set_log_level... yes checking for nc_rename_grp... yes checking for getopt... yes checking for getopt_long... (cached) yes checking for atan2... yes checking for acosf... yes checking for asinf... yes checking for atanf... yes checking for atan2f... yes checking for cosf... yes checking for expf... yes checking for fabsf... yes checking for fmodf... yes checking for log10f... yes checking for logf... yes checking for powf... yes checking for sinf... yes checking for sqrtf... yes checking for tanf... yes checking for erff... yes checking for erfcf... yes checking for gammaf... yes checking for acoshf... yes checking for asinhf... yes checking for atanhf... yes checking for coshf... yes checking for sinhf... yes checking for tanhf... yes checking for ceilf... yes checking for floorf... yes checking for nearbyint... yes checking for rint... yes checking for round... yes checking for trunc... yes checking for nearbyintf... yes checking for rintf... yes checking for roundf... yes checking for truncf... yes checking for getopt_long... (cached) yes checking for strdup... yes checking for strcasecmp... yes checking for strsep... yes checking for strcasestr... yes checking for htonl... yes checking for htons... yes checking for ntohl... yes checking for ntohs... yes checking for __builtin_bswap16... no checking for __builtin_bswap32... no checking for __builtin_bswap64... no ########################################################## # Sorting out MacOSX build parameters # ########################################################## ################################# # Testing for ANTLR support # ################################# checking for runantlr... runantlr configure: antlr library was found ################################################## # Testing for ESMF support (only for developers) # ################################################## ######################################## # Testing for GSL support # ######################################## configure: These GSL library and header tests must succeed for GSL support: checking for gsl_sf_gamma_inc in -lgsl... yes checking for /usr/include/gsl/gsl_sf_gamma.h... yes configure: GSL support enabled checking regex.h usability... yes checking regex.h presence... yes checking for regex.h... yes checking for sys/types.h... (cached) yes checking for regexec... yes checking for regcomp... (cached) yes checking for regfree... yes ######################################## # Testing for UDUNITS support # ######################################## checking for XML_ParserCreate in -lexpat... no checking for /usr/include/udunits2/udunits2.h... no checking for /usr/include/udunits2.h... yes checking for /usr/lib/x86_64-linux-gnu/libudunits2.a... no checking for /usr/lib/i386-linux-gnu/libudunits2.a... no checking for /opt/local/include/udunits2/udunits2.h... no checking for /opt/local/lib/libudunits2.a... no checking for ... no configure: WARNING: file was not found but will still attempt to build NCO with UDUnits2 support. configure: NB: Following tests of UDUnits2 library and header must succeed for UDUnits2 support: checking for ut_read_xml in -ludunits2... yes checking udunits2.h usability... yes checking udunits2.h presence... yes checking for udunits2.h... yes configure: UDUnits2 support enabled checking for ncgen... /usr/bin/ncgen configure: Creating sample netCDF data files for self-tests ############################### # Require Shared Libs? # ############################### checking for makeinfo... yes MAKEINFO_VERSION=6.5 configure: Documentation support enabled checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating data/Makefile config.status: creating src/Makefile config.status: creating src/nco/Makefile config.status: creating man/Makefile config.status: creating src/nco++/Makefile config.status: creating doc/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands Configuration Parameters: AR_FLAGS............. cru CC................... gcc CFLAGS............... -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE CPP.................. gcc -E CPPFLAGS............. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include CXX.................. g++ CXXFLAGS............. -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security ENABLE_DAP........... yes ENABLE_ESMF...........no ENABLE_GSL........... yes ENABLE_LOGGING....... ENABLE_NETCDF4....... yes ENABLE_OPENMP........ yes ENABLE_UDUNITS....... no ENABLE_UDUNITS2...... yes GSL_ROOT............. /usr HAVE_ANTLR........... runantlr HAVE_MAKEINFO........ yes HAVE_NETCDF4_H....... yes HOST................. HOSTNAME............. bos02-arm64-016 LDFLAGS.............. -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now LIBS................. -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 NETCDF_ROOT.......... /usr OPENMP_CFLAGS........ -fopenmp host................. aarch64-unknown-linux-gnu install prefix ...... /usr ******************************************************************* Configuration complete. You are now ready to run 'make'. Ensure 'make' points to GNU Make (AT&T Make chokes on GNU syntax). If the build fails, please examine the file 'configure.eg' in the top-level NCO directory. It contains examples known to build NCO for various platforms and compilers. ******************************************************************* make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j4 make[2]: Entering directory '/<>' make all-recursive make[3]: Entering directory '/<>' Making all in data make[4]: Entering directory '/<>/data' /usr/bin/ncgen -o big.nc big.cdl /usr/bin/ncgen -o in_rec_zero.nc in_rec_zero.cdl /<>/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc /bin/bash: /<>/src/nco/ncks: No such file or directory /usr/bin/ncgen -k netCDF-4 -o in_4.nc in.cdl make[4]: [Makefile:583: in_4c.nc] Error 127 (ignored) /usr/bin/ncgen -k netCDF-4 -o in_grp_8.nc in_grp_8.cdl /usr/bin/ncgen -k netCDF-4 -o hdn.nc hdn.cdl /usr/bin/ncgen -k netCDF-4 -o mrd.nc mrd.cdl /usr/bin/ncgen -k netCDF-4 -o split.nc split.cdl /usr/bin/ncgen -k netCDF-4 -o ref_utf8.nc ref_utf8.cdl make[4]: Leaving directory '/<>/data' Making all in src make[4]: Entering directory '/<>/src' Making all in nco make[5]: Entering directory '/<>/src/nco' gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncatted.o ncatted.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_att_utl.lo nco_att_utl.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_aux.lo nco_aux.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_bnr.lo nco_bnr.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncatted.c:104: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_aux.c -fPIC -DPIC -o .libs/nco_aux.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_aux.h:17, from nco_aux.c:22: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_bnr.c -fPIC -DPIC -o .libs/nco_bnr.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_bnr.h:17, from nco_bnr.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_att_utl.c -fPIC -DPIC -o .libs/nco_att_utl.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_att_utl.h:21, from nco_att_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cln_utl.lo nco_cln_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cln_utl.c -fPIC -DPIC -o .libs/nco_cln_utl.o /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_dmn.lo nco_cnf_dmn.c In file included from /usr/include/ctype.h:25, from nco_cln_utl.h:21, from nco_cln_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_dmn.c -fPIC -DPIC -o .libs/nco_cnf_dmn.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_cnf_dmn.h:17, from nco_cnf_dmn.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnf_typ.lo nco_cnf_typ.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnf_typ.c -fPIC -DPIC -o .libs/nco_cnf_typ.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_cnf_typ.h:17, from nco_cnf_typ.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnk.lo nco_cnk.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnk.c -fPIC -DPIC -o .libs/nco_cnk.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_cnk.h:17, from nco_cnk.c:45: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_arm.lo nco_cnv_arm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_arm.c -fPIC -DPIC -o .libs/nco_cnv_arm.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_cnv_arm.h:17, from nco_cnv_arm.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_cnv_csm.lo nco_cnv_csm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_cnv_csm.c -fPIC -DPIC -o .libs/nco_cnv_csm.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_cnv_csm.h:17, from nco_cnv_csm.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_ctl.lo nco_ctl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ctl.c -fPIC -DPIC -o .libs/nco_ctl.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_ctl.h:21, from nco_ctl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dbg.lo nco_dbg.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_dmn_utl.lo nco_dmn_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dbg.c -fPIC -DPIC -o .libs/nco_dbg.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_dbg.h:17, from nco_dbg.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_fl_utl.lo nco_fl_utl.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_utl.lo nco_grp_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_dmn_utl.c -fPIC -DPIC -o .libs/nco_dmn_utl.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_dmn_utl.h:21, from nco_dmn_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_fl_utl.c -fPIC -DPIC -o .libs/nco_fl_utl.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_utl.c -fPIC -DPIC -o .libs/nco_grp_utl.o In file included from /usr/include/errno.h:25, from nco_fl_utl.h:21, from nco_fl_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ In file included from /usr/include/assert.h:35, from nco_grp_utl.h:21, from nco_grp_utl.c:19: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_grp_trv.lo nco_grp_trv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_grp_trv.c -fPIC -DPIC -o .libs/nco_grp_trv.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_grp_trv.h:21, from nco_grp_trv.c:14: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lmt.lo nco_lmt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lmt.c -fPIC -DPIC -o .libs/nco_lmt.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_lmt.h:21, from nco_lmt.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ nco_fl_utl.c: In function ‘nco_fl_nm_prs’: nco_fl_utl.c:1374:38: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size 8 [-Wformat-overflow=] (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); ^~ nco_fl_utl.c:1374:34: note: directive argument in the range [-2147483648, 2147483645] (void)sprintf(fl_nm_nbr_sng_fmt,"%%0%dd%%02d",fl_nm_nbr_dgt-2); ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from nco_fl_utl.h:23, from nco_fl_utl.c:10: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 9 and 19 bytes into a destination of size 10 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_lst_utl.lo nco_lst_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_lst_utl.c -fPIC -DPIC -o .libs/nco_lst_utl.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_lst_utl.h:21, from nco_lst_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ nco_lst_utl.c: In function ‘nco_fmt_sng_printf_subst’: nco_lst_utl.c:38:23: warning: unknown escape sequence: '\.' const char rx_sng[]="%([+-0#'I])?([0-9]*)?([\.?[0-9]*)?([h+l+Ljzt])?[bcdeEfFgGiosuxX]"; /* [sng] Regular expression pattern */ ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_map.lo nco_map.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_map.c -fPIC -DPIC -o .libs/nco_map.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/aarch64-linux-gnu/8/include-fixed/limits.h:194, from /usr/lib/gcc/aarch64-linux-gnu/8/include-fixed/syslimits.h:7, from /usr/lib/gcc/aarch64-linux-gnu/8/include-fixed/limits.h:34, from nco_map.h:17, from nco_map.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_md5.lo nco_md5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_md5.c -fPIC -DPIC -o .libs/nco_md5.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_md5.h:22, from nco_md5.c:25: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mmr.lo nco_mmr.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_msa.lo nco_msa.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mmr.c -fPIC -DPIC -o .libs/nco_mmr.o In file included from /usr/include/errno.h:25, from nco_mmr.h:21, from nco_mmr.c:27: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_msa.c -fPIC -DPIC -o .libs/nco_msa.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_msa.h:21, from nco_msa.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mss_val.lo nco_mss_val.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mss_val.c -fPIC -DPIC -o .libs/nco_mss_val.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_mss_val.h:21, from nco_mss_val.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_mta.lo nco_mta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_mta.c -fPIC -DPIC -o .libs/nco_mta.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_mta.h:21, from nco_mta.c:12: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_netcdf.lo nco_netcdf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_netcdf.c -fPIC -DPIC -o .libs/nco_netcdf.o In file included from /usr/include/ctype.h:25, from nco_netcdf.h:43, from nco_netcdf.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_omp.lo nco_omp.c nco_netcdf.c: In function ‘nco_def_var_chunking’: nco_netcdf.c:1928:148: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 5 has type ‘unsigned int’ [-Wformat=] if(sz > NCO_MAX_CHUNK_SIZE) (void)fprintf(stderr, "%s: ERROR Total requested chunk size = %lu exceeds netCDF maximium-supported chunk size = %ld\n",fnc_nm,sz,NCO_MAX_CHUNK_SIZE); ~~^ %d libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_omp.c -fPIC -DPIC -o .libs/nco_omp.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_omp.h:17, from nco_omp.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_pck.lo nco_pck.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_ppc.lo nco_ppc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_pck.c -fPIC -DPIC -o .libs/nco_pck.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_pck.h:17, from nco_pck.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_ppc.c -fPIC -DPIC -o .libs/nco_ppc.o In file included from /usr/include/ctype.h:25, from nco_ppc.h:17, from nco_ppc.c:13: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_prn.lo nco_prn.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_prn.c -fPIC -DPIC -o .libs/nco_prn.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_prn.h:21, from nco_prn.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rec_var.lo nco_rec_var.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rec_var.c -fPIC -DPIC -o .libs/nco_rec_var.o nco_prn.c: In function ‘nco_prn_att’: nco_prn.c:284:23: warning: too many arguments for format [-Wformat-extra-args] sprintf(val_hdn_sng,"%u,",flt_id,prm_nbr); ^~~~~ In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_rec_var.h:17, from nco_rec_var.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rgr.lo nco_rgr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rgr.c -fPIC -DPIC -o .libs/nco_rgr.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/aarch64-linux-gnu/8/include-fixed/limits.h:194, from /usr/lib/gcc/aarch64-linux-gnu/8/include-fixed/syslimits.h:7, from /usr/lib/gcc/aarch64-linux-gnu/8/include-fixed/limits.h:34, from nco_rgr.h:17, from nco_rgr.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_flt.lo nco_rth_flt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_flt.c -fPIC -DPIC -o .libs/nco_rth_flt.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_rth_flt.h:21, from nco_rth_flt.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_rth_utl.lo nco_rth_utl.c nco_prn.c: In function ‘nco_prn_var_val_lmt’: nco_prn.c:1462:46: warning: ‘%s’ directive writing up to 99 bytes into a region of size 86 [-Wformat-overflow=] (void)sprintf(var_sng,"%%s%c%%ld--%%ld%c='%s' %%s",arr_lft_dlm,arr_rgt_dlm,dmn_sng); ^~ ~~~~~~~ In file included from /usr/include/stdio.h:873, from nco_prn.h:22, from nco_prn.c:10: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 19 and 118 bytes into a destination of size 100 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_rth_utl.c -fPIC -DPIC -o .libs/nco_rth_utl.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_rth_utl.h:17, from nco_rth_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scl_utl.lo nco_scl_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scl_utl.c -fPIC -DPIC -o .libs/nco_scl_utl.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_scl_utl.h:21, from nco_scl_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_scm.lo nco_scm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_scm.c -fPIC -DPIC -o .libs/nco_scm.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_scm.h:21, from nco_scm.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ nco_scm.c: In function ‘nco_vrs_prn’: nco_scm.c:168:25: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] const char date_cpp[]=__DATE__; /* [sng] Date from C pre-processor */ ^~~~~~~~ nco_scm.c:169:25: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] const char time_cpp[]=__TIME__; /* [sng] Time from C pre-processor */ ^~~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_sld.lo nco_sld.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sld.c -fPIC -DPIC -o .libs/nco_sld.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_sld.h:17, from nco_sld.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_sng_utl.lo nco_sng_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_sng_utl.c -fPIC -DPIC -o .libs/nco_sng_utl.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_sng_utl.h:21, from nco_sng_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_srm.lo nco_srm.c nco_sng_utl.c: In function ‘nm2sng_cdl’: nco_sng_utl.c:270:34: warning: ‘__builtin___snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); ^ In file included from /usr/include/stdio.h:873, from nco_sng_utl.h:21, from nco_sng_utl.c:10: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:10: note: ‘__builtin___snprintf_chk’ output 5 bytes into a destination of size 4 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ nco_sng_utl.c: In function ‘nm2sng_fl’: nco_sng_utl.c:425:34: warning: ‘__builtin___snprintf_chk’ output truncated before the last format character [-Wformat-truncation=] snprintf(chr_out_ptr,4,"\\%%%.2x",*chr_in_ptr); ^ In file included from /usr/include/stdio.h:873, from nco_sng_utl.h:21, from nco_sng_utl.c:10: /usr/include/aarch64-linux-gnu/bits/stdio2.h:67:10: note: ‘__builtin___snprintf_chk’ output 5 bytes into a destination of size 4 return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_srm.c -fPIC -DPIC -o .libs/nco_srm.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from nco_srm.h:21, from nco_srm.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_avg.lo nco_var_avg.c /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_lst.lo nco_var_lst.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_avg.c -fPIC -DPIC -o .libs/nco_var_avg.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_var_avg.h:17, from nco_var_avg.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_lst.c -fPIC -DPIC -o .libs/nco_var_lst.o In file included from /usr/include/assert.h:35, from nco_var_lst.h:21, from nco_var_lst.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_rth.lo nco_var_rth.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_rth.c -fPIC -DPIC -o .libs/nco_var_rth.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_var_rth.h:21, from nco_var_rth.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_scv.lo nco_var_scv.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_scv.c -fPIC -DPIC -o .libs/nco_var_scv.o In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from nco_var_scv.h:17, from nco_var_scv.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_var_utl.lo nco_var_utl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c nco_var_utl.c -fPIC -DPIC -o .libs/nco_var_utl.o In file included from /usr/include/assert.h:35, from nco_var_utl.h:21, from nco_var_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncbo.o ncbo.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncbo.c:58: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncecat.o ncecat.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncecat.c:46: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncflint.o ncflint.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncflint.c:43: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncks.o ncks.c In file included from /usr/include/assert.h:35, from ncks.c:67: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ ncecat.c: In function ‘main’: ncecat.c:781:30: warning: ‘%02d’ directive writing between 2 and 10 bytes into a region of size 3 [-Wformat-overflow=] sprintf(grp_out_sfx,"%02d",fl_idx); ^~~~ ncecat.c:781:29: note: directive argument in the range [0, 2147483647] sprintf(grp_out_sfx,"%02d",fl_idx); ^~~~~~ In file included from /usr/include/stdio.h:873, from ncecat.c:47: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output between 3 and 11 bytes into a destination of size 3 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncpdq.o ncpdq.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncpdq.c:47: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncra.o ncra.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncra.c:62: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncrename.o ncrename.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncrename.c:42: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncwa.o ncwa.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/math.h:27, from ncwa.c:44: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap_utl.o ncap_utl.c In file included from /usr/include/assert.h:35, from ncap_utl.c:10: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ test -f ncap_lex.c || /bin/bash ../../autobld/ylwrap ncap_lex.l lex.nco_yy.c ncap_lex.c -- flex -Pnco_yy gcc -DHAVE_CONFIG_H -I. -I../.. -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o ncap_lex.o ncap_lex.c In file included from /usr/include/aarch64-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from ncap_lex.c:278: /usr/include/features.h:184:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" ^~~~~~~ ncap_lex.c: In function ‘nco_yylex’: ncap_lex.l:612:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 160 [-Wformat-overflow=] (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:873, from ncap_lex.c:278: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 98 or more bytes (assuming 608) into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ncap_lex.l:588:29: warning: ‘%s’ directive writing up to 255 bytes into a region of size 160 [-Wformat-overflow=] (void)sprintf(ncap_err_sng,"Warning: Unable to locate RHS attribute %s of variable %s with var ID = %d in file %s. Returning 0-byte.",att_nm,var_nm,var_id,prs_arg->fl_in); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:873, from ncap_lex.c:278: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 98 or more bytes (assuming 608) into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ncap_lex.l:635:34: warning: ‘%s’ directive writing up to 255 bytes into a region of size 164 [-Wformat-overflow=] (void)sprintf(ncap_err_sng,"#Warning: unable to locate variable %s. So cannot create attribute %s",var_nm,yytext); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~ In file included from /usr/include/stdio.h:873, from ncap_lex.c:278: /usr/include/aarch64-linux-gnu/bits/stdio2.h:36:10: note: ‘__builtin___sprintf_chk’ output 66 or more bytes (assuming 321) into a destination of size 200 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -release 4.7.9 -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libnco.la -rpath /usr/lib/nco nco_att_utl.lo nco_aux.lo nco_bnr.lo nco_cln_utl.lo nco_cnf_dmn.lo nco_cnf_typ.lo nco_cnk.lo nco_cnv_arm.lo nco_cnv_csm.lo nco_ctl.lo nco_dbg.lo nco_dmn_utl.lo nco_fl_utl.lo nco_grp_utl.lo nco_grp_trv.lo nco_lmt.lo nco_lst_utl.lo nco_map.lo nco_md5.lo nco_mmr.lo nco_msa.lo nco_mss_val.lo nco_mta.lo nco_netcdf.lo nco_omp.lo nco_pck.lo nco_ppc.lo nco_prn.lo nco_rec_var.lo nco_rgr.lo nco_rth_flt.lo nco_rth_utl.lo nco_scl_utl.lo nco_scm.lo nco_sld.lo nco_sng_utl.lo nco_srm.lo nco_var_avg.lo nco_var_lst.lo nco_var_rth.lo nco_var_scv.lo nco_var_utl.lo -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crti.o /usr/lib/gcc/aarch64-linux-gnu/8/crtbeginS.o .libs/nco_att_utl.o .libs/nco_aux.o .libs/nco_bnr.o .libs/nco_cln_utl.o .libs/nco_cnf_dmn.o .libs/nco_cnf_typ.o .libs/nco_cnk.o .libs/nco_cnv_arm.o .libs/nco_cnv_csm.o .libs/nco_ctl.o .libs/nco_dbg.o .libs/nco_dmn_utl.o .libs/nco_fl_utl.o .libs/nco_grp_utl.o .libs/nco_grp_trv.o .libs/nco_lmt.o .libs/nco_lst_utl.o .libs/nco_map.o .libs/nco_md5.o .libs/nco_mmr.o .libs/nco_msa.o .libs/nco_mss_val.o .libs/nco_mta.o .libs/nco_netcdf.o .libs/nco_omp.o .libs/nco_pck.o .libs/nco_ppc.o .libs/nco_prn.o .libs/nco_rec_var.o .libs/nco_rgr.o .libs/nco_rth_flt.o .libs/nco_rth_utl.o .libs/nco_scl_utl.o .libs/nco_scm.o .libs/nco_sld.o .libs/nco_sng_utl.o .libs/nco_srm.o .libs/nco_var_avg.o .libs/nco_var_lst.o .libs/nco_var_rth.o .libs/nco_var_scv.o .libs/nco_var_utl.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -ludunits2 -L/usr/lib/gcc/aarch64-linux-gnu/8 -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/8/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/8/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/aarch64-linux-gnu/8/crtendS.o /usr/lib/gcc/aarch64-linux-gnu/8/../../../aarch64-linux-gnu/crtn.o -g -O2 -fstack-protector-strong -fopenmp -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -fopenmp -pthread -Wl,-soname -Wl,libnco-4.7.9.so -o .libs/libnco-4.7.9.so libtool: link: (cd ".libs" && rm -f "libnco.so" && ln -s "libnco-4.7.9.so" "libnco.so") libtool: link: ( cd ".libs" && rm -f "libnco.la" && ln -s "../libnco.la" "libnco.la" ) /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncatted ncatted.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncbo ncbo.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncecat ncecat.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncflint ncflint.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncecat ncecat.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncflint ncflint.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncbo ncbo.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncatted ncatted.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncks ncks.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncpdq ncpdq.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncra ncra.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncrename ncrename.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncks ncks.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncpdq ncpdq.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncra ncra.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncrename ncrename.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco /bin/bash ../../libtool --tag=CXX --tag=CC --mode=link gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncwa ncwa.o ncap_utl.o ncap_lex.o libnco.la -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 libtool: link: gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncwa ncwa.o ncap_utl.o ncap_lex.o -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl ./.libs/libnco.so -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco make[5]: Leaving directory '/<>/src/nco' Making all in nco++ make[5]: Entering directory '/<>/src/nco++' g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o Invoke.o Invoke.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncap2.o ncap2.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncap2_utl.o ncap2_utl.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncap2_att.o ncap2_att.cc In file included from libnco++.hh:26, from Invoke.cc:13: fmc_gsl_cls.hh:49: warning: "NCO_GSL_VERSION" redefined # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) In file included from fmc_gsl_cls.hh:12, from libnco++.hh:26, from Invoke.cc:13: ../../config.h:467: note: this is the location of the previous definition #define NCO_GSL_VERSION 205 In file included from libnco++.hh:26, from ncap2.cc:81: fmc_gsl_cls.hh:49: warning: "NCO_GSL_VERSION" redefined # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) In file included from fmc_gsl_cls.hh:12, from libnco++.hh:26, from ncap2.cc:81: ../../config.h:467: note: this is the location of the previous definition #define NCO_GSL_VERSION 205 g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sdo_utl.o sdo_utl.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o sym_cls.o sym_cls.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fmc_cls.o fmc_cls.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fmc_all_cls.o fmc_all_cls.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fmc_gsl_cls.o fmc_gsl_cls.cc In file included from fmc_gsl_cls.cc:10: fmc_gsl_cls.hh:49: warning: "NCO_GSL_VERSION" redefined # define NCO_GSL_VERSION ( NCO_GSL_MAJOR_VERSION * 100 + NCO_GSL_MINOR_VERSION * 10 + NCO_GSL_PATCH_VERSION ) In file included from ncap2_att.hh:5, from ncap2_utl.hh:60, from ncoGrammer.g:31, from fmc_gsl_cls.hh:43, from fmc_gsl_cls.cc:10: ../../config.h:467: note: this is the location of the previous definition #define NCO_GSL_VERSION 205 g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o prs_cls.o prs_cls.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o NcapVar.o NcapVar.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o NcapVarVector.o NcapVarVector.cc g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoLexer.o ncoLexer.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoParser.o ncoParser.cpp g++ -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncoTree.o ncoTree.cpp gcc -DHAVE_CONFIG_H -I. -I../.. -I./ -I../nco -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/include -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -std=c99 -D_BSD_SOURCE -D_POSIX_SOURCE -c -o nco_gsl.o nco_gsl.c /bin/bash ../../libtool --tag=CXX --tag=CXX --mode=link g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -L../nco -lnco -lantlr -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lnetcdf -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lm -lcurl -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -ludunits2 -lgsl -lm -lnetcdf -lnetcdf -lnetcdf -lcurl -L/usr/lib/aarch64-linux-gnu -lgsl -lgslcblas -lm -ludunits2 libtool: link: g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/ncap2 Invoke.o ncap2.o ncap2_utl.o ncap2_att.o sdo_utl.o sym_cls.o fmc_cls.o fmc_all_cls.o fmc_gsl_cls.o prs_cls.o NcapVar.o NcapVarVector.o ncoLexer.o ncoParser.o ncoTree.o nco_gsl.o -L../nco /<>/src/nco/.libs/libnco.so -lantlr -L/usr/lib/aarch64-linux-gnu -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lpthread -lsz -lz -ldl -lnetcdf /usr/lib/aarch64-linux-gnu/libcurl-gnutls.so -lgsl -lgslcblas -lm -ludunits2 -pthread -fopenmp -Wl,-rpath -Wl,/usr/lib/nco make[5]: Leaving directory '/<>/src/nco++' make[5]: Entering directory '/<>/src' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making all in man make[4]: Entering directory '/<>/man' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/<>/man' Making all in doc make[4]: Entering directory '/<>/doc' restore=: && backupdir=".am$$" && \ am__cwd=`pwd` && CDPATH="${ZSH_VERSION+.}:" && cd . && \ rm -rf $backupdir && mkdir $backupdir && \ if (/bin/bash /<>/autobld/missing makeinfo --version) >/dev/null 2>&1; then \ for f in nco.info nco.info-[0-9] nco.info-[0-9][0-9] nco.i[0-9] nco.i[0-9][0-9]; do \ if test -f $f; then mv $f $backupdir; restore=mv; else :; fi; \ done; \ else :; fi && \ cd "$am__cwd"; \ if /bin/bash /<>/autobld/missing makeinfo -I . \ -o nco.info nco.texi; \ then \ rc=0; \ CDPATH="${ZSH_VERSION+.}:" && cd .; \ else \ rc=$?; \ CDPATH="${ZSH_VERSION+.}:" && cd . && \ $restore $backupdir/* `echo "./nco.info" | sed 's|[^/]*$||'`; \ fi; \ rm -rf $backupdir; exit $rc make[4]: Leaving directory '/<>/doc' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' cd doc && /usr/bin/make clean && /usr/bin/make html make[2]: Entering directory '/<>/doc' test -z "nco.dvi nco.pdf nco.ps nco.html" \ || rm -rf nco.dvi nco.pdf nco.ps nco.html rm -rf .libs _libs rm -rf nco.t2d nco.t2p rm -f *.lo make[2]: Leaving directory '/<>/doc' make[2]: Entering directory '/<>/doc' rm -rf nco.htp if /bin/bash /<>/autobld/missing makeinfo --html --ifinfo --no-split -I . \ -o nco.htp nco.texi; \ then \ rm -rf nco.html && mv nco.htp nco.html; \ else \ rm -rf nco.htp; exit 1; \ fi make[2]: Leaving directory '/<>/doc' cd doc && /usr/bin/make nco.info && sed -i 's/xmp\/fgr[0-9].png/\/usr\/share\/doc\/nco\/&/' nco.info* make[2]: Entering directory '/<>/doc' make[2]: 'nco.info' is up to date. make[2]: Leaving directory '/<>/doc' make[1]: Leaving directory '/<>' debian/rules override_dh_auto_test make[1]: Entering directory '/<>' # currently the check phase badly fails dh_auto_test || echo "Ignoring test failures" make -j4 test VERBOSE=1 make[2]: Entering directory '/<>' make check make[3]: Entering directory '/<>' Making check in data make[4]: Entering directory '/<>/data' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/<>/data' Making check in src make[4]: Entering directory '/<>/src' Making check in nco make[5]: Entering directory '/<>/src/nco' make check-TESTS make[6]: Entering directory '/<>/src/nco' make[7]: Entering directory '/<>/src/nco' ============================================================================ Testsuite summary for NCO netCDF Operators 4.7.9 ============================================================================ # TOTAL: 0 # PASS: 0 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[7]: Leaving directory '/<>/src/nco' make[6]: Leaving directory '/<>/src/nco' make[5]: Leaving directory '/<>/src/nco' Making check in nco++ make[5]: Entering directory '/<>/src/nco++' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/<>/src/nco++' make[5]: Entering directory '/<>/src' make[5]: Nothing to be done for 'check-am'. make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' Making check in man make[4]: Entering directory '/<>/man' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/<>/man' Making check in doc make[4]: Entering directory '/<>/doc' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/<>/doc' make[4]: Entering directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' cd data && make in_4c.nc && cd .. make[3]: Entering directory '/<>/data' /<>/src/nco/ncks -O -7 --cnk_dmn time,10 in.nc in_4c.nc make[3]: Leaving directory '/<>/data' cd bm && ./nco_bm.pl --regress INFO: Testing for required modules Time::HiRes ... found. IO::Socket ... found. You do not have a $DATA directory defined and the test files are several GB. Where would you like to write the test data? Data will be placed in the indicated directory, under nco_bm, using the '--caseid' option to set the name of the subdirectory, if any. [/sbuild-nonexistent] or specify: You entered [] Making /sbuild-nonexistent/nco_bm/ & continuing mkdir: cannot create directory ‘/sbuild-nonexistent’: Permission denied failed to execute: ncks --lbr_rcd: No such file or directory ncap2 test 01: Testing float modulo float......................................................... ERR: FAILED in ncap2 test: Testing float modulo float ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.1 0.2 0.3 0.4 0.5 0.6 0.7 0.8 0.9 1.0 ] ncap2 test 02: Testing foo=log(e_flt)^1 (may fail on old AIX TODO ncap57)......................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Testing foo=log(e_flt)^1 (may fail on old AIX TODO ncap57) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.000000] ncap2 test 03: Testing foo=log(e_dbl)^1........................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Testing foo=log(e_dbl)^1 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.000000000000] ncap2 test 04: Testing foo=4*atan(1).............................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Testing foo=4*atan(1) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3.141592741013] ncap2 test 05: Testing foo=erf(1) (may fail on old AIX TODO ncap57)............................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Testing foo=erf(1) (may fail on old AIX TODO ncap57) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.842700779438] ncap2 test 06: Testing foo=gamma(0.5) (may fail on old AIX TODO ncap57)........................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Testing foo=gamma(0.5) (may fail on old AIX TODO ncap57) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.772453851] ncap2 test 07: Testing foo=sin(pi/2).............................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Testing foo=sin(pi/2) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.000000000000] ncap2 test 08: Testing foo=cos(pi)................................................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Testing foo=cos(pi) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-1.000000000000] ncap2 test 09: Casting variable with same name as dimension (ncap81 failed with netCDF4 until n... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Casting variable with same name as dimension (ncap81 failed with netCDF4 until netCDF 4.3.x) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10] ncap2 test 10: Casting variable with a single dim of sz=1 (ncap81 failed with netCDF4 until net... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Casting variable with a single dim of sz=1 (ncap81 failed with netCDF4 until netCDF 4.3.x) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10] ncap2 test 11: Verify non-averaging functions min/max on coordinate variables..................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Verify non-averaging functions min/max on coordinate variables ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-90] ncap2 test 12: Run script to to test GSL functions -FAILS IF NOT linked to GSL lib................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Run script to to test GSL functions -FAILS IF NOT linked to GSL lib ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncap2 test 13: Run script to to test casting, hyperslabbing and intrinsic functions (Requires G... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Run script to to test casting, hyperslabbing and intrinsic functions (Requires GSL) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncap2 test 14: Run script to test conversion of input vars to type NC_DOUBLE using var-pointers... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Run script to test conversion of input vars to type NC_DOUBLE using var-pointers ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncap2 test 15: Run script to test udunits code.................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Run script to test udunits code ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncap2 test 16: Run script to to test ncap2 NC_STRING handling (failure expected 2017-06-21)....... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Run script to to test ncap2 NC_STRING handling (failure expected 2017-06-21) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncap2 test 17: Run script to test sort functions.................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Run script to test sort functions ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncap2 test 18: Run script to test pack() function................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncap2 test: Run script to test pack() function ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2802.00] ncatted test 01: Modify all existing units attributes to meter second-1............................. !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0 ERR: FAILED in ncatted test: Modify all existing units attributes to meter second-1 ERR::EXPLAIN: Result: [] != Expected: [meter second-1] ncatted test 02: Change _FillValue attribute from 1.0e36 to 0.0 in netCDF3 file..................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncatted test: Change _FillValue attribute from 1.0e36 to 0.0 in netCDF3 file ERR::EXPLAIN: Result: [] != Expected: [0] ncatted test 03: Create new _FillValue attribute.................................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncatted test: Create new _FillValue attribute ERR::EXPLAIN: Result: [] != Expected: [1] ncatted test 04: Pad header with 1000B extra for future metadata (failure OK/expected since test ... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncatted test: Pad header with 1000B extra for future metadata (failure OK/expected since test depends on command-line length) ERR::EXPLAIN: Result: [] != Expected: [27] ncatted test 05: Variable wildcarding (requires regex).............................................. !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncatted test: Variable wildcarding (requires regex) ERR::EXPLAIN: Result: [] != Expected: [999] ncatted test 06: Attribute wildcarding (requires regex)............................................. !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncatted test: Attribute wildcarding (requires regex) ERR::EXPLAIN: Result: [] != Expected: [999] ncatted test 07: Delete all attributes.............................................................. FAILED! ERR: FAILED in ncatted test: Delete all attributes ERR::EXPLAIN: Result: [0] != Expected: [4] ncbo test 01: Difference a packed variable and be sure everything is zero or _FillValue by ave... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: Difference a packed variable and be sure everything is zero or _FillValue by average whole remainder and comparing to zero.) FAILS with netCDF4 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.0] ncbo test 02: Whole file difference with broadcasting (OK to fail here fxm TODO nco757. Works ... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: Whole file difference with broadcasting (OK to fail here fxm TODO nco757. Works with --mmr_drt, triggers segfault on OSs like FC Linux which have C-library armor. Harmless Failure caused by free'ing dangling pointer during memory cleanup.) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [4.5] ncbo test 03: difference scalar missing value.................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: difference scalar missing value ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36] ncbo test 04: difference with missing value attribute............................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: difference with missing value attribute ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36] ncbo test 05: difference without missing value attribute......................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: difference without missing value attribute ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncbo test 06: _FillValues differ between files................................................... ERR: FAILED in ncbo test: _FillValues differ between files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-999.000000,-999.000000,-999.000000,-999.000000] ncbo test 07: _FillValue in one variable (not both variables).................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: _FillValue in one variable (not both variables) ERR::EXPLAIN: Result: [] != Expected: [0] ncbo test 08: ncdiff symbolically linked to ncbo................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: ncdiff symbolically linked to ncbo ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36] ncbo test 09: difference with missing value attribute............................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: difference with missing value attribute ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36] ncbo test 10: Difference without missing value attribute......................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: Difference without missing value attribute ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncbo test 11: Difference which tests broadcasting and changing variable IDs...................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: Difference which tests broadcasting and changing variable IDs ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-1.0] ncbo test 12: Difference which tests 3D broadcasting............................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: Difference which tests 3D broadcasting ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2697] ncbo test 13: Addition + 3D broadcasting+ MSA.................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncbo test: Addition + 3D broadcasting+ MSA ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [422] ncbo test 14: Copy associated coordinates -v three_dmn_rec_var................................... ERR: FAILED in ncbo test: Copy associated coordinates -v three_dmn_rec_var ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time[9]=10 lat[1]=90 lon[3]=270 three_dmn_rec_var[79]=0] ncbo test 15: Concatenate variables with different ID ordering................................... ERR: FAILED in ncbo test: Concatenate variables with different ID ordering ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 0] nces test 01: ensemble mean of int across two files.............................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: ensemble mean of int across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] nces test 02: ensemble sum of missing value across two files..................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: ensemble sum of missing value across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36] nces test 03: ensemble mean with missing values across two files................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: ensemble mean with missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36] nces test 04: ensemble min of float across two files............................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: ensemble min of float across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2] nces test 05: scale factor + add_offset packing/unpacking........................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: scale factor + add_offset packing/unpacking ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3] nces test 06: ensemble mean of integer with integer missing values across two files.............. ERR: FAILED in nces test: ensemble mean of integer with integer missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-999 2 3 4 5 6 7 8 -999 -999] nces test 07: ensemble mean of 3D variable across two files with MSA............................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: ensemble mean of 3D variable across two files with MSA ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [150] nces test 08: Check op with OpenMP............................................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0 ERR: FAILED in nces test: Check op with OpenMP ERR::EXPLAIN: Result: [] != Expected: [n2 = 1] nces test 09: Ensemble mean of variable packed with netCDF convention across three files......... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: Ensemble mean of variable packed with netCDF convention across three files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7] nces test 10: Ensemble mean of variable packed with HDF convention across three files............ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in nces test: Ensemble mean of variable packed with HDF convention across three files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-8] nces test 11: Test file loop..................................................................... ERR: FAILED in nces test: Test file loop ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [dgn[0]=73 dgn_var[0]=73] nces test 12: Test mebs normalization............................................................ ERR: FAILED in nces test: Test mebs normalization ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 1] nces test 13: Test tabs (total absolute value)................................................... ERR: FAILED in nces test: Test tabs (total absolute value) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 2] nces test 14: Test tabs on coordinate............................................................ ERR: FAILED in nces test: Test tabs on coordinate ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon[3]=270] ncecat test 01: concatenate two files containing only scalar variables............................. ERR: FAILED in ncecat test: concatenate two files containing only scalar variables ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 1.000, ] ncecat test 02: concatenate two 3D vars with multihyperslabbing.................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncecat test: concatenate two 3D vars with multihyperslabbing ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [84] ncecat test 03: Concatenate variables with different ID ordering................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncecat test: Concatenate variables with different ID ordering ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncecat test 04: Verify concatentated coordinates do not gain new record dimension.................. ERR: FAILED in ncecat test: Verify concatentated coordinates do not gain new record dimension ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=90] ncecat test 05: Test group aggregation with --gag.................................................. ERR: FAILED in ncecat test: Test group aggregation with --gag ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 1] ncflint test 01: identity weighting................................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncflint test: identity weighting ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0] ncflint test 02: identity interpolation............................................................. !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncflint test: identity interpolation ERR::EXPLAIN: Result: [] != Expected: [2.0] ncflint test 03: switch order of occurrence to test for commutivity................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncflint test: switch order of occurrence to test for commutivity ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1e+36] ncflint test 04: output type float when interpolating between two packed floats..................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncflint test: output type float when interpolating between two packed floats ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [4] ncflint test 05: Concatenate variables with different ID ordering................................... ERR: FAILED in ncflint test: Concatenate variables with different ID ordering ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one = 1] ncks test 01: Create T42 variable named one, uniformly 1.0 over globe in %tmp_fl_03%. (FAILURE... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: Create T42 variable named one, uniformly 1.0 over globe in %tmp_fl_03%. (FAILURE with netCDF4 ncrename nco821) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncks test 02: extract filename string............................................................ SVa ok ncks test 03: extract a dimension................................................................ ERR: FAILED in ncks test: extract a dimension ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.000000,500.000000,1000.000000] ncks test 04: extract a variable with limits..................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: extract a variable with limits ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [23] ncks test 05: extract variable of type NC_INT.................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: extract variable of type NC_INT ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10] ncks test 06: Multi-slab lat and lon with srd.................................................... ERR: FAILED in ncks test: Multi-slab lat and lon with srd ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [12.0,13.0,14.0,15.0,20.0,21.0,22.0,23.0] ncks test 07: Multi-slab with redundant hyperslabs............................................... ERR: FAILED in ncks test: Multi-slab with redundant hyperslabs ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [20.0,21.0,22.0,23.0] ncks test 08: Multi-slab with coordinates........................................................ ERR: FAILED in ncks test: Multi-slab with coordinates ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [20.0,21.0,22.0,23.0] ncks test 09: Double-wrapped hyperslab........................................................... ERR: FAILED in ncks test: Double-wrapped hyperslab ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [23.0,20.0,15.0,12.0] ncks test 10: dimension slice using UDUnits library (fails without UDUnits library support)...... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: dimension slice using UDUnits library (fails without UDUnits library support) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [876018] ncks test 11: dim slice using UDUnits library and cal 365_days (fails without UDUnits library ... ERR: FAILED in ncks test: dim slice using UDUnits library and cal 365_days (fails without UDUnits library support) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon_cln_ttl = 10] ncks test 12: dim slice using UDUnits library and cal 360_days (fails without UDUnits library ... ERR: FAILED in ncks test: dim slice using UDUnits library and cal 360_days (fails without UDUnits library support) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat_cln_ttl = 18] ncks test 13: dimension slice using UDUnit conversion (fails without UDUnits library support).... SVn prov. ok ncks test 14: variable wildcards A (fails without regex library)................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: variable wildcards A (fails without regex library) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3] ncks test 15: variable wildcards B (fails without regex library)................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: variable wildcards B (fails without regex library) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncks test 16: Print byte value................................................................... SVn ok ncks test 17: CF convention coordinates attribute................................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: CF convention coordinates attribute ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [180] ncks test 18: Create/copy global _FillValue...................................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: Create/copy global _FillValue ERR::EXPLAIN: Result: [] != Expected: [222] ncks test 19: Auxiliary coordinates writing -X 0.,1.,-30.,-29. -v gds_3dvar...................... ERR: FAILED in ncks test: Auxiliary coordinates writing -X 0.,1.,-30.,-29. -v gds_3dvar ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [gds_crd[0]=1 lon_gds[0]=0 degree] ncks test 20: Extract CF 'ancillary_variables' variables (netCDF3 file).......................... ERR: FAILED in ncks test: Extract CF 'ancillary_variables' variables (netCDF3 file) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time[0]=6 cnv_CF_ncl_var_2[0]=36] ncks test 21: Select last element using negative one index....................................... SVa ok ncks test 22: Auxiliary coordinate writing two variables......................................... SVa ok ncks test 23: Test -X auxiliary coordinates where underlying dimension is a non-coordinate dim... SVa ok ncks test 24: Test attribute writing for DSD compression......................................... SVa ok ncks test 25: Test DSD compression rounding to hundreds.......................................... SVn ok ncks test 26: Test DSD attribute does not overwrite pre-existing rounder values.................. SVa ok ncks test 27: Test DSD attribute does overwrite pre-existing sharper values in multi-argument ... SVa ok ncks test 28: Test attribute writing for NSD compression......................................... SVa ok ncks test 29: Test NSD compression rounding to three significant digits.......................... SVn ok ncks test 30: Test NSD attribute does not overwrite pre-existing rounder values.................. SVa ok ncks test 31: Test NSD attribute does overwrite pre-existing sharper values...................... SVa ok ncks test 32: Test that -x exclusion of coordinate variables only works with -C.................. SVa ok ncks test 33: Extract 'climatology' variables.................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: Extract 'climatology' variables ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10.5] ncks test 34: (Groups) Test wrapped limit with addtional limit (no --msa)........................ SVa ok ncks test 35: (Groups) Test wrapped limit with additional limit and msa user order (expect fai... ERR: FAILED in ncks test: (Groups) Test wrapped limit with additional limit and msa user order (expect failure TODO nco1134) ERR::EXPLAIN: Result: [time[2]=3 ] != Expected: [time[3]=3] ncks test 36: Multi-argument parsing by Jerome, test last argument is time string................ ERR: FAILED in ncks test: Multi-argument parsing by Jerome, test last argument is time string ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Thu Sep 15 13:03:18 PDT 2016] ncks test 37: Multi-argument parsing test first argument......................................... ERR: FAILED in ncks test: Multi-argument parsing test first argument ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar1] ncks test 38: Multi-argument parsing test second-to-last key is time string...................... ERR: FAILED in ncks test: Multi-argument parsing test second-to-last key is time string ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Thu Sep 15 13:03:18 PDT 2016] ncks test 39: Multi-argument parsing test arguments after time string kvm........................ ERR: FAILED in ncks test: Multi-argument parsing test arguments after time string kvm ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar4] ncks test 40: Multi-argument parsing test when all kvms have subdelimiters....................... ERR: FAILED in ncks test: Multi-argument parsing test when all kvms have subdelimiters ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar4] ncks test 41: Multi-argument parsing test when some of the delimiters are handled by backslash... ERR: FAILED in ncks test: Multi-argument parsing test when some of the delimiters are handled by backslashes ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Thu Sep 15 13:03:18 PDT 2016] ncks test 42: Test UDUNITS with dates as limits - fails without UDUNITS.......................... ERR: FAILED in ncks test: Test UDUNITS with dates as limits - fails without UDUNITS ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 9106] ncks test 43: Test behavior when NC4_SRD_WORKAROUND would be used................................ ERR: FAILED in ncks test: Test behavior when NC4_SRD_WORKAROUND would be used ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [zg_ttl_dff = 0] ncks test 44: Multi-argument parsing test with flags............................................. ERR: FAILED in ncks test: Multi-argument parsing test with flags ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [bar4] ncks test 45: netCDF4 test extraction of OOG CF2 vars declared in lon4_var:bounds and lat4_var... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: netCDF4 test extraction of OOG CF2 vars declared in lon4_var:bounds and lat4_var:coordinates ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncks test 46: netCDF4 test --cal switch.......................................................... SVa ok ncks test 47: ncks test auxiliary coords WITHOUT standard_name................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncks test: ncks test auxiliary coords WITHOUT standard_name ERR::EXPLAIN: Result: [] != Expected: [0] ncpdq test 01: Reverse coordinate -a -lat -v lat.................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Reverse coordinate -a -lat -v lat ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [90] ncpdq test 02: Reverse 3D variable a -lat,-lev,-lon -v three_dmn_var.............................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Reverse 3D variable a -lat,-lev,-lon -v three_dmn_var ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [23] ncpdq test 03: Re-order 3D variable (no associated coordinates) -C -a lon,lat -v three_dmn_var ... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Re-order 3D variable (no associated coordinates) -C -a lon,lat -v three_dmn_var ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [11] ncpdq test 04: Re-order 3D variable (associated coordinates) -a lon,lat -v three_dmn_var ......... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Re-order 3D variable (associated coordinates) -a lon,lat -v three_dmn_var ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [11] ncpdq test 05: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,3 -d time,9,9 -d lon,0,0 -d lon,3,3 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [20] ncpdq test 06: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,... ERR: FAILED in ncpdq test: Re-order 3D variable with MSA -C -a lat,lon,time -v three_dmn_var_dbl -d time,0,3 -d time,9,9 -d lon,0,0 -d lon,3,3 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_var_dbl] ncpdq test 07: Re-order 3D variable with MSA (stride) -a lat,lon,time -d time,1,3,2 -d lat,1,1,... ERR: FAILED in ncpdq test: Re-order 3D variable with MSA (stride) -a lat,lon,time -d time,1,3,2 -d lat,1,1,1 -d lon,1,3,2 -v three_dmn_var_dbl ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 lon[1]=270 time[0]=2 three_dmn_var_dbl[2]=16] ncpdq test 08: Re-order 3D variable with MSA+ reversal of time dim -C -a lat,lon,-time -v three... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Re-order 3D variable with MSA+ reversal of time dim -C -a lat,lon,-time -v three_dmn_var_dbl -d time,0,3 -d time,9,9 -d lon,0,0 -d lon,3,3 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [8] ncpdq test 09: Re-order 3D variable with MSA and --msa_usr_rdr flag -C -a lon,lat -v three_dmn_... ERR: FAILED in ncpdq test: Re-order 3D variable with MSA and --msa_usr_rdr flag -C -a lon,lat -v three_dmn_var_dbl -d time,0,2 -d time,4 -d lat,1 -d lat,1 --msa_usr_rdr ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [13,13] ncpdq test 10: Re-order 2D variable (-C, no MSA, no-reorder) -v two_dmn_var -a lat,lev............ ERR: FAILED in ncpdq test: Re-order 2D variable (-C, no MSA, no-reorder) -v two_dmn_var -a lat,lev ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1] lev[1] two_dmn_var[4]=17.5 fraction] ncpdq test 11: Re-order 2D variable (-C, no MSA) -v two_dmn_var -a lev,lat........................ ERR: FAILED in ncpdq test: Re-order 2D variable (-C, no MSA) -v two_dmn_var -a lev,lat ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1] lat[1] two_dmn_var[3]=17.5 fraction] ncpdq test 12: Re-order 2D variable (no -C, no MSA) -v two_dmn_var -a lev,lat..................... ERR: FAILED in ncpdq test: Re-order 2D variable (no -C, no MSA) -v two_dmn_var -a lev,lat ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1]=500 lat[1]=90 two_dmn_var[3]=17.5 fraction] ncpdq test 13: Re-order 2D variable (-C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,1..... ERR: FAILED in ncpdq test: Re-order 2D variable (-C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,1 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0] lat[0] two_dmn_var[0]=17.5 fraction] ncpdq test 14: Re-order 2D variable (no -C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,... ERR: FAILED in ncpdq test: Re-order 2D variable (no -C, MSA) -v two_dmn_var -a lev,lat -d lat,1,1 -d lev,1,1 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0]=500 lat[0]=90 two_dmn_var[0]=17.5 fraction] ncpdq test 15: Re-order 2D variable with record (-C, no MSA) -v two_dmn_rec_var -C -a lev,time.... ERR: FAILED in ncpdq test: Re-order 2D variable with record (-C, no MSA) -v two_dmn_rec_var -C -a lev,time ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1] time[1] two_dmn_rec_var[11]=2.1 watt meter-2] ncpdq test 16: Re-order 2D variable with record (no -C, no MSA) -v two_dmn_rec_var -a lev,time.... ERR: FAILED in ncpdq test: Re-order 2D variable with record (no -C, no MSA) -v two_dmn_rec_var -a lev,time ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[1]=500 time[1]=2 two_dmn_rec_var[11]=2.1 watt meter-2] ncpdq test 17: Re-order 2D variable with record (-C, MSA) -a lev,time -d time,1,1 -d lev,1,1 -v... ERR: FAILED in ncpdq test: Re-order 2D variable with record (-C, MSA) -a lev,time -d time,1,1 -d lev,1,1 -v two_dmn_rec_var ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0] time[0] two_dmn_rec_var[0]=2.1 watt meter-2] ncpdq test 18: Re-order 2D variable with record (no -C, MSA) -a lev,time -d time,1,1 -d lev,1,1... ERR: FAILED in ncpdq test: Re-order 2D variable with record (no -C, MSA) -a lev,time -d time,1,1 -d lev,1,1 -v two_dmn_rec_var ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0]=500 time[0]=2 two_dmn_rec_var[0]=2.1 watt meter-2] ncpdq test 19: Reverse/Re-order 3D variable -a -lat,-time -v three_dmn_var_dbl -d time,1,1 -d l... ERR: FAILED in ncpdq test: Reverse/Re-order 3D variable -a -lat,-time -v three_dmn_var_dbl -d time,1,1 -d lat,1,1 -d lon,1,1 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=-90 time[2]=2 lon[0]=90 three_dmn_var_dbl[5]=10] ncpdq test 20: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test1...... ERR: FAILED in ncpdq test: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test1 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=90 time[1]=2 ty[11]=4] ncpdq test 21: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test2...... ERR: FAILED in ncpdq test: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (no MSA) Test2 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[1]=90 time[1]=2 lon[1]=90 three_dmn_rec_var[45]=14] ncpdq test 22: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test1 read ... ERR: FAILED in ncpdq test: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test1 read ty ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 time[2]=6 ty[2]=12] ncpdq test 23: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test2 read ... ERR: FAILED in ncpdq test: Re-order several variables -a lat,time -v ty,three_dmn_rec_var (MSA) Test2 read three_dmn_rec_var ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 time[1]=4 lon[1]=90 three_dmn_rec_var[5]=30] ncpdq test 24: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test3 check recor... ERR: FAILED in ncpdq test: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test3 check record for lat ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_rec_var dimension 0: lat, size = 2] ncpdq test 25: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test4 check non-r... ERR: FAILED in ncpdq test: Re-order several variables -a lat,time -v ty,three_dmn_rec_var Test4 check non-record dim is time ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [)emit si etanidrooC(] ncpdq test 26: Reverse/Re-order 4D variable -a lev,time,-lon,-lat -v four_dmn_rec_var (MSA)....... ERR: FAILED in ncpdq test: Reverse/Re-order 4D variable -a lev,time,-lon,-lat -v four_dmn_rec_var (MSA) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lev[0]=500 time[2]=6 lon[0]=90 lat[0]=90 four_dmn_rec_var[2]=138] ncpdq test 27: Re-order 3D variable (only 1 in -a) -a lat,time -v PS,three_dmn_var_crd (MSA)...... ERR: FAILED in ncpdq test: Re-order 3D variable (only 1 in -a) -a lat,time -v PS,three_dmn_var_crd (MSA) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 lev[0]=500 lon[0]=90 three_dmn_var_crd[0]=17] ncpdq test 28: Re-order all variables -a lat,time (MSA)........................................... ERR: FAILED in ncpdq test: Re-order all variables -a lat,time (MSA) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lat[0]=90 time[0]=2 lev[2]=1000 lon[2]=180 four_dmn_rec_var[10]=47] ncpdq test 29: Pack and then unpack scalar (uses only add_offset) -P all_new -v upk............... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Pack and then unpack scalar (uses only add_offset) -P all_new -v upk ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [3] ncpdq test 30: Unpack 1D variable with MSA -C P upk -v rec_var_dbl_mss_val_dbl_pck -d time,0,4 ... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Unpack 1D variable with MSA -C P upk -v rec_var_dbl_mss_val_dbl_pck -d time,0,4 -d time,6 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7] ncpdq test 31: Pack 3D variable with MSA -C -P all_xst -v three_dmn_var_dbl -d time,0,2 -d time... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Pack 3D variable with MSA -C -P all_xst -v three_dmn_var_dbl -d time,0,2 -d time,8,9 -d lon,0 -d lon,1 -d lat,1 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [17505] ncpdq test 32: Unpack 1D variable twice to verify first unpacking does not inadvertently store ... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Unpack 1D variable twice to verify first unpacking does not inadvertently store packing attributes ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7] ncpdq test 33: Unpack 1D variable with netCDF convention.......................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Unpack 1D variable with netCDF convention ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [7] ncpdq test 34: Unpack 1D variable with HDF convention............................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Unpack 1D variable with HDF convention ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-8] ncpdq test 35: Re-pack 1D variable from HDF convention to netCDF convention....................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncpdq test: Re-pack 1D variable from HDF convention to netCDF convention ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-8] ncrcat test 01: Concatenate float with double missing values across two files...................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrcat test: Concatenate float with double missing values across two files ERR::EXPLAIN: Result: [] != Expected: [2] ncrcat test 02: Concatenate record coordinate-bounded variable across two non-monotonic files...... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0 ERR: FAILED in ncrcat test: Concatenate record coordinate-bounded variable across two non-monotonic files ERR::EXPLAIN: Result: [] != Expected: [2 3 2 3] ncrcat test 03: Concatenate float variable with multislabs across two files........................ !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrcat test: Concatenate float variable with multislabs across two files ERR::EXPLAIN: Result: [] != Expected: [20] ncrcat test 04: Concatenate int variable with multislabs across two files.......................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrcat test: Concatenate int variable with multislabs across two files ERR::EXPLAIN: Result: [] != Expected: [28] ncrcat test 05: Concatenate float 4D variable with multislabs across two files..................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrcat test: Concatenate float 4D variable with multislabs across two files ERR::EXPLAIN: Result: [] != Expected: [204] ncrcat test 06: Concatenate 1D variable with stride across two files............................... ERR: FAILED in ncrcat test: Concatenate 1D variable with stride across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 1, 5, 9,13,17] ncrcat test 07: Concatenate 1D variable with stride across three files............................. ERR: FAILED in ncrcat test: Concatenate 1D variable with stride across three files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 1, 9,17,25] ncrcat test 08: Concatenate 1D variable with stride across files with different record dimension... ERR: FAILED in ncrcat test: Concatenate 1D variable with stride across files with different record dimensions ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [11,13,15,27] ncrcat test 09: Concatenate 1D variable across two files no limits. Requires UDUnits............... ERR: FAILED in ncrcat test: Concatenate 1D variable across two files no limits. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 210] ncrcat test 10: Concatenate 1D variable across three files double limits. Requires UDUnits......... ERR: FAILED in ncrcat test: Concatenate 1D variable across three files double limits. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 17] ncrcat test 11: Concatenate 1D variable across three files double limits2. Requires UDUnits........ ERR: FAILED in ncrcat test: Concatenate 1D variable across three files double limits2. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 155] ncrcat test 12: Concatenate 1D variable across three files time stamp limits2. Requires UDUnits.... ERR: FAILED in ncrcat test: Concatenate 1D variable across three files time stamp limits2. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 33] ncrcat test 13: Cat. 1D var over 3 files with large stride. Requires UDUnits....................... ERR: FAILED in ncrcat test: Cat. 1D var over 3 files with large stride. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 33] ncrcat test 14: Cat. 1D var over 3 files coord limits+stride. Requires UDUnits..................... ERR: FAILED in ncrcat test: Cat. 1D var over 3 files coord limits+stride. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 51] ncrcat test 15: Cat. 1D var over three files date-stamp limits+stride. Requires UDUnits............ ERR: FAILED in ncrcat test: Cat. 1D var over three files date-stamp limits+stride. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 51] ncrcat test 16: Cat. 1D var over 3 files date-stamp limits+stride. Requires UDUnits................ ERR: FAILED in ncrcat test: Cat. 1D var over 3 files date-stamp limits+stride. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 54] ncrcat test 17: Cat. 1D variable over 3 files dmn limits+stride. Requires UDUnits.................. ERR: FAILED in ncrcat test: Cat. 1D variable over 3 files dmn limits+stride. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 20] ncrcat test 18: Cat. 1D var over 4 files different record sizes. Requires UDUnits.................. ERR: FAILED in ncrcat test: Cat. 1D var over 4 files different record sizes. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 92] ncrcat test 19: Cat. 1D var over 4 files with srd=4 different rec sizes. Requires UDUnits.......... ERR: FAILED in ncrcat test: Cat. 1D var over 4 files with srd=4 different rec sizes. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 28] ncrcat test 20: Cat. 1D var over 4 files with srd=3 str/end timestamps. Requires UDUnits........... ERR: FAILED in ncrcat test: Cat. 1D var over 4 files with srd=3 str/end timestamps. Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 45] ncrcat test 21: Append records to existing file without copying original........................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncrcat test: Append records to existing file without copying original ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10] ncrcat test 22: Concatenate 1D variable across two files. [hours file1 - days file2] .Requires U... ERR: FAILED in ncrcat test: Concatenate 1D variable across two files. [hours file1 - days file2] .Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 1475] ncrcat test 23: Concatenate 1D variable across 1 file with temperature (Celsius) limits............ ERR: FAILED in ncrcat test: Concatenate 1D variable across 1 file with temperature (Celsius) limits ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 5] ncrcat test 24: Concatenate 1D variable across 1 file. [limits - timstamp day_360 calendar] .Req... ERR: FAILED in ncrcat test: Concatenate 1D variable across 1 file. [limits - timstamp day_360 calendar] .Requires UDUnits. ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [time_ttl = 10] ncrcat test 25: Concatenate 1D variable across two files no limits check climatology_bounds . Re... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0 ERR: FAILED in ncrcat test: Concatenate 1D variable across two files no limits check climatology_bounds . Requires UDUnits. ERR::EXPLAIN: Result: [] != Expected: [climo_ttl = 420] ncrcat test 26: Detect input_complete when stride skips user-specified idx_end_max................. ERR: FAILED in ncrcat test: Detect input_complete when stride skips user-specified idx_end_max ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1, 10,] ncrcat test 27: Another detect input_complete when stride skips user-specified idx_end_max......... ERR: FAILED in ncrcat test: Another detect input_complete when stride skips user-specified idx_end_max ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1, 3,] ncra test 01: record sdn of float with double missing values across two files.................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record sdn of float with double missing values across two files ERR::EXPLAIN: Result: [] != Expected: [2] ncra test 02: record mean of int across two files................................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of int across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [6] ncra test 03: record mean of float with double missing values.................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of float with double missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 04: record mean of float with integer missing values................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of float with integer missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 05: record mean of integer with integer missing values................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of integer with integer missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 06: record mean of integer with integer missing values across two files................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of integer with integer missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 07: record mean of integer with float missing values................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of integer with float missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 08: record mean of integer with float missing values across two files.................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of integer with float missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 09: record mean of packed double with double missing values............................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of packed double with double missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 10: record mean of packed double to test precision..................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of packed double to test precision ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.55] ncra test 11: record mean of packed float to test precision...................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of packed float to test precision ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.55] ncra test 12: pass through non-record (i.e., non-processed) packed data to output................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: pass through non-record (i.e., non-processed) packed data to output ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncra test 13: record mean of float with double missing values across two files................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record mean of float with double missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5] ncra test 14: record min of float with double missing values across two files.................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record min of float with double missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2] ncra test 15: record max of float with double missing values across two files.................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record max of float with double missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [8] ncra test 16: record ttl of float with double missing values across two files.................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record ttl of float with double missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [70] ncra test 17: record rms of float with double missing values across two files.................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: record rms of float with double missing values across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.38516] ncra test 18: Return mean time coordinate (when computing totals) across two files............... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Return mean time coordinate (when computing totals) across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.5] ncra test 19: Return total record (when computing totals) across two files....................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Return total record (when computing totals) across two files ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [110] ncra test 20: Return record average of cell-based geodesic data.................................. ERR: FAILED in ncra test: Return record average of cell-based geodesic data ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [ 277.7 277.8 277.9 278.0 278.1 278.2] ncra test 21: Check op with OpenMP............................................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 0 ERR: FAILED in ncra test: Check op with OpenMP ERR::EXPLAIN: Result: [] != Expected: [n2 = 1] ncra test 22: Append records to existing file without copying original........................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Append records to existing file without copying original ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [6] ncra test 23: Treatment of missing values with MRO and rth_dbl................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Treatment of missing values with MRO and rth_dbl ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [__] ncra test 24: Handle scale factor and missing value with rth_dbl................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Handle scale factor and missing value with rth_dbl ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.5] ncra test 25: Test per-file weighting with --wgt 28,29,30........................................ ERR: FAILED in ncra test: Test per-file weighting with --wgt 28,29,30 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1, 2.45, 3,] ncra test 26: Test per-record weighting with --wgt=one_dmn_rec_wgt............................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Test per-record weighting with --wgt=one_dmn_rec_wgt ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.33333] ncra test 27: Test per-file weighting without missing values..................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Test per-file weighting without missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2.33333] ncra test 28: Test per-file weighting with missing values with --wgt 1,2,3....................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Test per-file weighting with missing values with --wgt 1,2,3 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2.6] ncra test 29: Test per-file weighting with missing values with --wgt 3,2,1....................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Test per-file weighting with missing values with --wgt 3,2,1 ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0] ncra test 30: Test MSA running average (expect failure TODO nco1126)............................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncra test: Test MSA running average (expect failure TODO nco1126) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.5] ncra test 31: Test SSC MRO running average....................................................... ERR: FAILED in ncra test: Test SSC MRO running average ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.5, 3.5, 5.5, 7.5, 9.5,] ncwa test 01: Creating %tmp_fl_03% again (FAILURE netCDF4 ncrename nco821) ...................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Creating %tmp_fl_03% again (FAILURE netCDF4 ncrename nco821) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncwa test 02: normalize by denominator upper hemisphere (FAILURE netCDF4 ncrename nco821)........ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: normalize by denominator upper hemisphere (FAILURE netCDF4 ncrename nco821) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncwa test 03: return average coordinate coordinate variable during minimization for non-coordi... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: return average coordinate coordinate variable during minimization for non-coordinate variables ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0] ncwa test 04: pass through non-averaged (i.e., non-processed) packed data to output.............. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: pass through non-averaged (i.e., non-processed) packed data to output ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1] ncwa test 05: do not normalize by denominator (FAILURE netCDF4 nco946)........................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: do not normalize by denominator (FAILURE netCDF4 nco946) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [40] ncwa test 06: average with missing value attribute............................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average with missing value attribute ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [73] ncwa test 07: average without missing value attribute............................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average without missing value attribute ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.0e35] ncwa test 08: average masked coordinate.......................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average masked coordinate ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [90.0] ncwa test 09: average masked variable............................................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average masked variable ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [2.0] ncwa test 10: average masked, weighted coordinate................................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average masked, weighted coordinate ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [100.0] ncwa test 11: average masked, weighted variable.................................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average masked, weighted variable ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [666.6667] ncwa test 12: weight conforms to variable first time............................................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: weight conforms to variable first time ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-90.0] ncwa test 13: average all missing values with weights............................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average all missing values with weights ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0e36] ncwa test 14: average some missing values with unity weights..................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average some missing values with unity weights ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [1.0] ncwa test 15: average masked variable with some missing values................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average masked variable with some missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [0.5] ncwa test 16: average uniform field with uniform weights......................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average uniform field with uniform weights ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10] ncwa test 17: average uniform field with asymmetric weights...................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average uniform field with asymmetric weights ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10] ncwa test 18: average asymmetric field with asymmetric weights................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: average asymmetric field with asymmetric weights ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [10] ncwa test 19: min switch on type double, some missing values..................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: min switch on type double, some missing values ERR::EXPLAIN: Result: [] != Expected: [2] ncwa test 20: Dimension reduction with min switch and missing values............................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction with min switch and missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99] ncwa test 21: Dimension reduction with min switch................................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction with min switch ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [77] ncwa test 22: Dimension reduction on type int with min switch and missing values................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type int with min switch and missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99] ncwa test 23: Dimension reduction on type int variable........................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type int variable ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [25] ncwa test 24: Dimension reduction on type short variable with min switch and missing values...... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type short variable with min switch and missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99] ncwa test 25: Dimension reduction on type short variable......................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type short variable ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [29] ncwa test 26: Dimension reduction with min flag on type float variable........................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction with min flag on type float variable ERR::EXPLAIN: Result: [] != Expected: [1] ncwa test 27: Max flag on type float variable.................................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Max flag on type float variable ERR::EXPLAIN: Result: [] != Expected: [240] ncwa test 28: Dimension reduction on type double variable with max switch and missing values..... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type double variable with max switch and missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99] ncwa test 29: Dimension reduction on type double variable........................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type double variable ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [40] ncwa test 30: Dimension reduction on type int variable with min switch and missing values........ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type int variable with min switch and missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99] ncwa test 31: Dimension reduction on type int variable........................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type int variable ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [29] ncwa test 32: Dimension reduction on type short variable with max switch and missing values...... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type short variable with max switch and missing values ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-99] ncwa test 33: Dimension reduction on type short, max switch variable............................. !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Dimension reduction on type short, max switch variable ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [69] ncwa test 34: Weights at root group level........................................................ !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Weights at root group level ERR::EXPLAIN: Result: [] != Expected: [30] ncwa test 35: weights would cause SIGFPE without dbl_prc patch................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: weights would cause SIGFPE without dbl_prc patch ERR::EXPLAIN: Result: [] != Expected: [1] ncwa test 36: avg would overflow without dbl_prc patch........................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: avg would overflow without dbl_prc patch ERR::EXPLAIN: Result: [] != Expected: [17000] ncwa test 37: test wrapped ttl with dbl_prc patch (harmless failure expected/OK on all chips s... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: test wrapped ttl with dbl_prc patch (harmless failure expected/OK on all chips since wrap behavior is not IEEE-specified) ERR::EXPLAIN: Result: [] != Expected: [-31536] ncwa test 38: min with weights................................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: min with weights ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [-900] ncwa test 39: max with weights................................................................... !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: max with weights ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [900] ncwa test 40: Return mean time coordinate (when computing totals)................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Return mean time coordinate (when computing totals) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [5.5] ncwa test 41: Return total record (when computing totals)........................................ !!FAILED $cmd_rsl_is_nbr = 0 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Return total record (when computing totals) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [55] ncwa test 42: Retain degenerate dimensions (one variable)........................................ ERR: FAILED in ncwa test: Retain degenerate dimensions (one variable) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon[0]=135] ncwa test 43: Retain degenerate dimensions (all variables)....................................... ERR: FAILED in ncwa test: Retain degenerate dimensions (all variables) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon[0]=135] ncwa test 44: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,... ERR: FAILED in ncwa test: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,lon ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_rec_var attribute 3: cell_methods, size = 15 NC_CHAR, value = time, lon: mean] ncwa test 45: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,... ERR: FAILED in ncwa test: Cell methods (Create, average) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,lon ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one_dmn_rec_var attribute 2: cell_methods, size = 10 NC_CHAR, value = time: mean] ncwa test 46: Cell methods (Create, maximum) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,... ERR: FAILED in ncwa test: Cell methods (Create, maximum) -v one,one_dmn_rec_var,three_dmn_rec_var -a time,lon ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [three_dmn_rec_var attribute 3: cell_methods, size = 18 NC_CHAR, value = time, lon: maximum] ncwa test 47: Mask condition with negative value................................................. ERR: FAILED in ncwa test: Mask condition with negative value ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [Lat = _] ncwa test 48: Minimization on packed single-precision float...................................... ERR: FAILED in ncwa test: Minimization on packed single-precision float ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [non_rec_var_flt_pck = 100.1] ncwa test 49: Simple weights..................................................................... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncwa test: Simple weights ERR::EXPLAIN: Result: [] != Expected: [1.333333] ncwa test 50: Test mebs normalization............................................................ ERR: FAILED in ncwa test: Test mebs normalization ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one_dmn_rec_var_flt = 5.5] ncwa test 51: Test tabs (total absolute value)................................................... ERR: FAILED in ncwa test: Test tabs (total absolute value) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [one_dmn_rec_var = 55] ncwa test 52: Test tabs on coordinate............................................................ ERR: FAILED in ncwa test: Test tabs on coordinate ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [lon = 135] ncwa test 53: Mask condition not in variable list (fixed with nco1138 20170804).................. ERR: FAILED in ncwa test: Mask condition not in variable list (fixed with nco1138 20170804) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [orog = 4] ncwa test 54: Mask condition not in variable list (mask is relative coordinate variable) (fixe... ERR: FAILED in ncwa test: Mask condition not in variable list (mask is relative coordinate variable) (fixed with nco1138 20170804) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [orog2 = 4] ncwa test 55: Mask condition not in variable list (mask is absolute coordinate variable) (fixe... ERR: FAILED in ncwa test: Mask condition not in variable list (mask is absolute coordinate variable) (fixed with nco1138 20170804) ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [orog2 = 4] ncwa test 56: Weight without mask and without hyperslab.......................................... ERR: FAILED in ncwa test: Weight without mask and without hyperslab ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [orog2 = 28] ncwa test 57: Weight without mask and with hyperslab............................................. ERR: FAILED in ncwa test: Weight without mask and with hyperslab ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [orog2 = 22] ncwa test 58: Weight with mask and with hyperslab................................................ ERR: FAILED in ncwa test: Weight with mask and with hyperslab ERR::EXPLAIN: Result: [nco_err_exit(): ERROR NCO will now exit with system call exit(EXIT_FAILURE)] != Expected: [orog2 = 16] ncrenam test 01: netCDF3: Valid values after renaming coordinate dimension in netCDF3 file.......... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF3: Valid values after renaming coordinate dimension in netCDF3 file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 02: netCDF3: Valid values after renaming coordinate variable in netCDF3 file........... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF3: Valid values after renaming coordinate variable in netCDF3 file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 03: netCDF3: Valid values after renaming coordinate dimension and variable in netCDF... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF3: Valid values after renaming coordinate dimension and variable in netCDF3 file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 04: netCDF4-classic: Valid values after renaming coordinate dimension in netCDF4-cla... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF4-classic: Valid values after renaming coordinate dimension in netCDF4-classic file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 05: netCDF4-classic: Valid values after renaming coordinate variable in netCDF4-clas... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF4-classic: Valid values after renaming coordinate variable in netCDF4-classic file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 06: netCDF4-classic: Valid values after renaming coordinate dimension and variable i... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF4-classic: Valid values after renaming coordinate dimension and variable in netCDF4-classic file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 07: netCDF4: Valid values after renaming coordinate dimension in netCDF4 file.......... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF4: Valid values after renaming coordinate dimension in netCDF4 file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 08: netCDF4: Valid values after renaming coordinate variable in netCDF4 file........... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF4: Valid values after renaming coordinate variable in netCDF4 file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 09: netCDF4: Valid values after renaming coordinate dimension and variable in netCDF... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF4: Valid values after renaming coordinate dimension and variable in netCDF4 file ERR::EXPLAIN: Result: [] != Expected: [1] ncrenam test 10: netCDF4: Simultaneously rename multiple dimensions (netCDF bug, requires Unidata... !!FAILED $cmd_rsl_is_nbr = 1 and $xpc_is_nbr = 1 ERR: FAILED in ncrename test: netCDF4: Simultaneously rename multiple dimensions (netCDF bug, requires Unidata fix https://github.com/Unidata/netcdf-c/issues/597) ERR::EXPLAIN: Result: [] != Expected: [1] Linux bos02-arm64-016 4.4.0-142-generic #168-Ubuntu SMP Wed Jan 16 21:00:53 UTC 2019 aarch64 aarch64 aarch64 GNU/Linux; gcc (Ubuntu/Linaro 8.2.0-21ubuntu1) 8.2.0; Test Results Seconds to complete -------------------------- ---------------------------------------- Test Success Failure Total WallClock Real User System Diff ncap2: 0 18 18 0.00 0.00 0.00 0.00 0.00 ncatted: 0 7 7 0.70 0.00 0.00 0.00 0.00 ncbo: 0 15 15 0.20 0.00 0.00 0.00 0.00 ncflint: 0 5 5 0.19 0.00 0.00 0.00 0.00 nces: 0 14 14 0.07 0.00 0.00 0.00 0.00 ncecat: 0 5 5 0.00 0.00 0.00 0.00 0.00 ncks: 17 30 47 4.90 0.00 0.00 0.00 0.00 ncpdq: 0 35 35 0.00 0.00 0.00 0.00 0.00 ncra: 0 31 31 0.03 0.00 0.00 0.00 0.00 ncrcat: 0 27 27 0.16 0.00 0.00 0.00 0.00 ncrename: 0 10 10 0.99 0.00 0.00 0.00 0.00 ncwa: 0 58 58 0.13 0.00 0.00 0.00 0.00 NB:MD5: test passes MD5 checksum on file(s) May be more than one intermediate file. SVx: test passes single terminal value check SVn=numeric, SVa=alphabetic OK - data NOT sent, thanks for using NCO anyway - bye! make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' fakeroot debian/rules binary-arch dh binary-arch --with autoreconf \ --buildsystem autoconf \ --parallel dh_testroot -a -O--buildsystem=autoconf -O--parallel dh_prep -a -O--buildsystem=autoconf -O--parallel debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install make -j1 install DESTDIR=/<>/debian/nco AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' Making install in data make[3]: Entering directory '/<>/data' make[4]: Entering directory '/<>/data' /bin/mkdir -p '/<>/debian/nco/usr/bin' /usr/bin/install -c ncclimo ncremap '/<>/debian/nco/usr/bin' make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>/data' make[3]: Leaving directory '/<>/data' Making install in src make[3]: Entering directory '/<>/src' Making install in nco make[4]: Entering directory '/<>/src/nco' make[5]: Entering directory '/<>/src/nco' /bin/mkdir -p '/<>/debian/nco/usr/lib/nco' /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c libnco.la '/<>/debian/nco/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/libnco-4.7.9.so /<>/debian/nco/usr/lib/nco/libnco-4.7.9.so libtool: install: (cd /<>/debian/nco/usr/lib/nco && { ln -s -f libnco-4.7.9.so libnco.so || { rm -f libnco.so && ln -s libnco-4.7.9.so libnco.so; }; }) libtool: install: /usr/bin/install -c .libs/libnco.lai /<>/debian/nco/usr/lib/nco/libnco.la libtool: warning: remember to run 'libtool --finish /usr/lib/nco' /bin/mkdir -p '/<>/debian/nco/usr/bin' /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncatted ncbo ncecat ncflint ncks ncpdq ncra ncrename ncwa '/<>/debian/nco/usr/bin' libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncatted /<>/debian/nco/usr/bin/ncatted libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncbo /<>/debian/nco/usr/bin/ncbo libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncecat /<>/debian/nco/usr/bin/ncecat libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncflint /<>/debian/nco/usr/bin/ncflint libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncks /<>/debian/nco/usr/bin/ncks libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncpdq /<>/debian/nco/usr/bin/ncpdq libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncra /<>/debian/nco/usr/bin/ncra libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncrename /<>/debian/nco/usr/bin/ncrename libtool: warning: 'libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncwa /<>/debian/nco/usr/bin/ncwa make install-exec-hook make[6]: Entering directory '/<>/src/nco' cd /<>/debian/nco/usr/bin && ln -s -f ncbo ncdiff || (rm -f ncdiff && ln -s -f ncbo ncdiff) cd /<>/debian/nco/usr/bin && ln -s -f ncra ncea || (rm -f ncea && ln -s -f ncra ncea) cd /<>/debian/nco/usr/bin && ln -s -f ncra nces || (rm -f nces && ln -s -f ncra nces) cd /<>/debian/nco/usr/bin && ln -s -f ncra ncrcat || (rm -f ncrcat && ln -s -f ncra ncrcat) make[6]: Leaving directory '/<>/src/nco' make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/src/nco' make[4]: Leaving directory '/<>/src/nco' Making install in nco++ make[4]: Entering directory '/<>/src/nco++' make[5]: Entering directory '/<>/src/nco++' /bin/mkdir -p '/<>/debian/nco/usr/bin' /bin/bash ../../libtool --tag=CXX --mode=install /usr/bin/install -c ncap2 '/<>/debian/nco/usr/bin' libtool: warning: '/<>/src/nco/libnco.la' has not been installed in '/usr/lib/nco' libtool: install: /usr/bin/install -c .libs/ncap2 /<>/debian/nco/usr/bin/ncap2 make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/src/nco++' make[4]: Leaving directory '/<>/src/nco++' make[4]: Entering directory '/<>/src' make[5]: Entering directory '/<>/src' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' Making install in man make[3]: Entering directory '/<>/man' make[4]: Entering directory '/<>/man' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/nco/usr/share/man/man1' /usr/bin/install -c -m 644 ncap2.1 ncatted.1 ncbo.1 ncclimo.1 nces.1 ncecat.1 ncflint.1 ncks.1 nco.1 ncra.1 ncremap.1 ncrename.1 ncpdq.1 ncrcat.1 ncwa.1 '/<>/debian/nco/usr/share/man/man1' make[4]: Leaving directory '/<>/man' make[3]: Leaving directory '/<>/man' Making install in doc make[3]: Entering directory '/<>/doc' make[4]: Entering directory '/<>/doc' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/nco/usr/share/info' /usr/bin/install -c -m 644 ./nco.info ./nco.info-1 ./nco.info-2 ./nco.info-3 ./nco.info-4 '/<>/debian/nco/usr/share/info' make[4]: Leaving directory '/<>/doc' make[3]: Leaving directory '/<>/doc' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' find /<>/debian/nco -name '*.h' -delete find /<>/debian/nco -name '*.hh' -delete rm -f debian/nco/usr/lib/nco/libnco.la rm -f debian/nco/usr/share/info/dir make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install --list-missing dh_install: Please use dh_missing --list-missing/--fail-missing instead dh_install: This feature will be removed in compat 12. make[1]: Leaving directory '/<>' dh_installdocs -a -O--buildsystem=autoconf -O--parallel dh_installchangelogs -a -O--buildsystem=autoconf -O--parallel dh_installman -a -O--buildsystem=autoconf -O--parallel dh_installinfo -a -O--buildsystem=autoconf -O--parallel dh_installinit -a -O--buildsystem=autoconf -O--parallel dh_lintian -a -O--buildsystem=autoconf -O--parallel dh_perl -a -O--buildsystem=autoconf -O--parallel dh_link -a -O--buildsystem=autoconf -O--parallel dh_strip_nondeterminism -a -O--buildsystem=autoconf -O--parallel dh_compress -a -O--buildsystem=autoconf -O--parallel dh_fixperms -a -O--buildsystem=autoconf -O--parallel dh_missing -a -O--buildsystem=autoconf -O--parallel dh_strip -a -O--buildsystem=autoconf -O--parallel debian/rules override_dh_makeshlibs make[1]: Entering directory '/<>' dh_makeshlibs -Xusr/lib/nco make[1]: Leaving directory '/<>' dh_shlibdeps -a -O--buildsystem=autoconf -O--parallel dpkg-shlibdeps: warning: debian/nco/usr/lib/nco/libnco-4.7.9.so contains an unresolvable reference to symbol nco_mta_dlm_get: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--buildsystem=autoconf -O--parallel dh_gencontrol -a -O--buildsystem=autoconf -O--parallel dh_md5sums -a -O--buildsystem=autoconf -O--parallel dh_builddeb -a -O--buildsystem=autoconf -O--parallel INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing nco (in debian/nco); do_strip: , oemstrip: pkgstriptranslations: processing nco-dbgsym (in debian/.debhelper/nco/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/nco/DEBIAN/control, package nco, directory debian/nco pkgstripfiles: Truncating usr/share/doc/nco/changelog.Debian.gz to topmost ten records pkgstripfiles: Running PNG optimization (using 4 cpus) for package nco ... pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/nco/dbgsym-root/DEBIAN/control, package nco-dbgsym, directory debian/.debhelper/nco/dbgsym-root dpkg-deb: building package 'nco-dbgsym' in 'debian/.debhelper/scratch-space/build-nco/nco-dbgsym_4.7.9-1_arm64.deb'. ooo pkgstripfiles: PNG optimization (3/0) for package nco took 12 s dpkg-deb: building package 'nco' in '../nco_4.7.9-1_arm64.deb'. Renaming nco-dbgsym_4.7.9-1_arm64.deb to nco-dbgsym_4.7.9-1_arm64.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../nco_4.7.9-1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20190221-1118 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ nco_4.7.9-1_arm64.changes: -------------------------- Format: 1.8 Date: Thu, 21 Feb 2019 06:59:59 +0100 Source: nco Binary: nco Architecture: arm64 Version: 4.7.9-1 Distribution: disco-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Bas Couwenberg Description: nco - Command-line operators to analyze netCDF files Changes: nco (4.7.9-1) unstable; urgency=medium . * New upstream release. * Bump Standards-Version to 4.3.0, no changes. Checksums-Sha1: 62bf1a3157182b01ed16b32a21242ecc6d815472 5724580 nco-dbgsym_4.7.9-1_arm64.ddeb a0ef5b39b52f4eea823e2888822e4f3839768d4e 8498 nco_4.7.9-1_arm64.buildinfo a1fdf0218ff73c15cf66ba2941cf450ffef83d30 1502924 nco_4.7.9-1_arm64.deb Checksums-Sha256: 463041419e5baf568f51e3ee0d146e0571bb0e7f851e33e248efade1e4c27d33 5724580 nco-dbgsym_4.7.9-1_arm64.ddeb 060186661c48d6f90ca04df7c53d68cdeabf360d2f5692acb1e32322340f8ce0 8498 nco_4.7.9-1_arm64.buildinfo 87b6554dcf30dde0b9a1cff345ec0b713594a0115699e71ab67c8f627ccf9324 1502924 nco_4.7.9-1_arm64.deb Files: 91691bc0800e9d88e2c7f23a54ed8850 5724580 debug optional nco-dbgsym_4.7.9-1_arm64.ddeb 1a60fc8909b13e5e095df07a0265557a 8498 science optional nco_4.7.9-1_arm64.buildinfo 8106e1a4de49a8462b8cb3a585a1df0f 1502924 science optional nco_4.7.9-1_arm64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ nco_4.7.9-1_arm64.deb --------------------- new debian package, version 2.0. size 1502924 bytes: control archive=1856 bytes. 898 bytes, 16 lines control 2438 bytes, 41 lines md5sums Package: nco Version: 4.7.9-1 Architecture: arm64 Maintainer: Ubuntu Developers Original-Maintainer: Debian GIS Project Installed-Size: 5307 Depends: libc6 (>= 2.27), libgcc1 (>= 1:4.2), libgomp1 (>= 4.9), libgsl23 (>= 2.5), libnetcdf13 (>= 4.6.2), libstdc++6 (>= 5.2), libudunits2-0 (>= 2.2.14) Section: science Priority: optional Homepage: http://nco.sourceforge.net/ Description: Command-line operators to analyze netCDF files NCO is a suite of programs known as operators. The operators are stand-alone, command-line programs executable in a POSIX shell. Operators take one or more netCDF files as input, perform operations (e.g., averaging, hyperslabbing), and produce a netCDF output file. NCO was originally designed to manipulate and analyze climate data, though it works on any netCDF format datasets. drwxr-xr-x root/root 0 2019-02-21 05:59 ./ drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/ drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/bin/ -rwxr-xr-x root/root 1256568 2019-02-21 05:59 ./usr/bin/ncap2 -rwxr-xr-x root/root 19680 2019-02-21 05:59 ./usr/bin/ncatted -rwxr-xr-x root/root 30048 2019-02-21 05:59 ./usr/bin/ncbo -rwxr-xr-x root/root 151128 2019-02-21 05:59 ./usr/bin/ncclimo lrwxrwxrwx root/root 0 2019-02-21 05:59 ./usr/bin/ncdiff -> ncbo lrwxrwxrwx root/root 0 2019-02-21 05:59 ./usr/bin/ncea -> ncra -rwxr-xr-x root/root 38528 2019-02-21 05:59 ./usr/bin/ncecat lrwxrwxrwx root/root 0 2019-02-21 05:59 ./usr/bin/nces -> ncra -rwxr-xr-x root/root 38400 2019-02-21 05:59 ./usr/bin/ncflint -rwxr-xr-x root/root 50592 2019-02-21 05:59 ./usr/bin/ncks -rwxr-xr-x root/root 38592 2019-02-21 05:59 ./usr/bin/ncpdq -rwxr-xr-x root/root 59584 2019-02-21 05:59 ./usr/bin/ncra lrwxrwxrwx root/root 0 2019-02-21 05:59 ./usr/bin/ncrcat -> ncra -rwxr-xr-x root/root 153790 2019-02-21 05:59 ./usr/bin/ncremap -rwxr-xr-x root/root 27904 2019-02-21 05:59 ./usr/bin/ncrename -rwxr-xr-x root/root 80000 2019-02-21 05:59 ./usr/bin/ncwa drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/lib/ drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/lib/nco/ -rw-r--r-- root/root 908752 2019-02-21 05:59 ./usr/lib/nco/libnco-4.7.9.so lrwxrwxrwx root/root 0 2019-02-21 05:59 ./usr/lib/nco/libnco.so -> libnco-4.7.9.so drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/ drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/doc-base/ -rw-r--r-- root/root 479 2018-04-07 14:13 ./usr/share/doc-base/nco drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/doc/nco/ -rw-r--r-- root/root 726 2019-02-21 05:59 ./usr/share/doc/nco/changelog.Debian.gz -rw-r--r-- root/root 10677 2018-04-07 14:13 ./usr/share/doc/nco/copyright -rw-r--r-- root/root 2075159 2019-02-21 05:59 ./usr/share/doc/nco/nco.html drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/doc/nco/xmp/ -rw-r--r-- root/root 9899 2019-02-21 05:59 ./usr/share/doc/nco/xmp/fgr1.png -rw-r--r-- root/root 13791 2019-02-21 05:59 ./usr/share/doc/nco/xmp/fgr2.png -rw-r--r-- root/root 5648 2019-02-21 05:59 ./usr/share/doc/nco/xmp/fgr3.png drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/info/ -rw-r--r-- root/root 98761 2019-02-21 05:59 ./usr/share/info/nco.info-1.gz -rw-r--r-- root/root 93673 2019-02-21 05:59 ./usr/share/info/nco.info-2.gz -rw-r--r-- root/root 94361 2019-02-21 05:59 ./usr/share/info/nco.info-3.gz -rw-r--r-- root/root 51969 2019-02-21 05:59 ./usr/share/info/nco.info-4.gz -rw-r--r-- root/root 3854 2019-02-21 05:59 ./usr/share/info/nco.info.gz drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/lintian/ drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 246 2018-04-07 14:13 ./usr/share/lintian/overrides/nco drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/man/ drwxr-xr-x root/root 0 2019-02-21 05:59 ./usr/share/man/man1/ -rw-r--r-- root/root 1826 2019-02-21 05:59 ./usr/share/man/man1/ncap2.1.gz -rw-r--r-- root/root 4316 2019-02-21 05:59 ./usr/share/man/man1/ncatted.1.gz -rw-r--r-- root/root 3357 2019-02-21 05:59 ./usr/share/man/man1/ncbo.1.gz -rw-r--r-- root/root 1410 2019-02-21 05:59 ./usr/share/man/man1/ncclimo.1.gz -rw-r--r-- root/root 2231 2019-02-21 05:59 ./usr/share/man/man1/ncecat.1.gz -rw-r--r-- root/root 2522 2019-02-21 05:59 ./usr/share/man/man1/nces.1.gz -rw-r--r-- root/root 2537 2019-02-21 05:59 ./usr/share/man/man1/ncflint.1.gz -rw-r--r-- root/root 5607 2019-02-21 05:59 ./usr/share/man/man1/ncks.1.gz -rw-r--r-- root/root 2007 2019-02-21 05:59 ./usr/share/man/man1/nco.1.gz -rw-r--r-- root/root 1990 2019-02-21 05:59 ./usr/share/man/man1/ncpdq.1.gz -rw-r--r-- root/root 2326 2019-02-21 05:59 ./usr/share/man/man1/ncra.1.gz -rw-r--r-- root/root 2526 2019-02-21 05:59 ./usr/share/man/man1/ncrcat.1.gz -rw-r--r-- root/root 1582 2019-02-21 05:59 ./usr/share/man/man1/ncremap.1.gz -rw-r--r-- root/root 2453 2019-02-21 05:59 ./usr/share/man/man1/ncrename.1.gz -rw-r--r-- root/root 2807 2019-02-21 05:59 ./usr/share/man/man1/ncwa.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build-Space: 138412 Build-Time: 383 Distribution: disco-proposed Host Architecture: arm64 Install-Time: 88 Job: nco_4.7.9-1.dsc Machine Architecture: arm64 Package: nco Package-Time: 475 Source-Version: 4.7.9-1 Space: 138412 Status: successful Version: 4.7.9-1 -------------------------------------------------------------------------------- Finished at 20190221-1118 Build needed 00:07:55, 138412k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=disco --arch=arm64 PACKAGEBUILD-16415077 Scanning for processes to kill in build PACKAGEBUILD-16415077