Ubuntu
ncbi-tools6 package

ncbi-tools6 6.1.20170106+dfsg2-2 source package in Ubuntu

Changelog

ncbi-tools6 (6.1.20170106+dfsg2-2) unstable; urgency=medium

  * Don't rely on any implicit function declarations.  (Closes: #1066356.)
    - api/asn2gnb2.c: Correct the first(!) <asn2gnbi.h> to <ffprint.h>
      for PrintDate.
    - api/salutil.c: +<alignmgr2.h> for AlnMgr2IndexSingleChildSeqAlign.
    - vibrant/shim3d.h: Add a prototype for Nlm_SetOGLContext and
      supporting forward declarations.  (Some name clashes preclude
      reliably including X headers from here.)
  * debian/control: Apply routine-update.
    - List fields in its preferred order.
    - Wrap lists to hold one item per line.
    - Standards-Version: 4.6.2 (no changes needed).
    - Drop ncbi-cn3d's Breaks/Replaces on ancient ncbi-tools-x11.

 -- Aaron M. Ucko <email address hidden>  Tue, 19 Mar 2024 23:21:24 -0400

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
oldlibs
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe oldlibs
Noble release universe oldlibs

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File Size SHA-256 Checksum
ncbi-tools6_6.1.20170106+dfsg2-2.dsc 2.9 KiB 869871c94adc13d916848cfa8882dafb0a84f591079893c6a7b3a379bafb554a
ncbi-tools6_6.1.20170106+dfsg2.orig.tar.xz 62.6 MiB 45969f833173cb5547951b4b3837b052c5b146b39a0e90fc7c2a362d50e0f95c
ncbi-tools6_6.1.20170106+dfsg2-2.debian.tar.xz 1.4 MiB ab9a691a67611e5c9b82fafaac922d03a6d630f91f16004961d12918b09c8bcb

No changes file available.

Binary packages built by this source

libncbi6-dev: NCBI libraries for biology applications (development files)

 This package supplies development versions of NCBI's non-graphical C
 libraries, along with the corresponding header files.

libncbi6t64: NCBI libraries for biology applications

 The NCBI Software Development Toolkit was developed for the production and
 distribution of GenBank, Entrez, BLAST, and related services by NCBI. It
 allows you to read and write NCBI ASN.1 files, builds Blast or Entrez, etc.

libncbi6t64-dbgsym: debug symbols for libncbi6t64
libvibrant6-dev: NCBI libraries for graphic biology applications (development files)

 Vibrant allows you to develop portable (Motif, MS-Windows, Mac-OS) graphic
 biological applications.

libvibrant6t64: NCBI libraries for graphic biology applications

 This is the library for those who just want to run Vibrant applications.
 It also includes a wrapper (vibrate) that allows many NCBI applications to
 provide a GUI for selecting options.

libvibrant6t64-dbgsym: debug symbols for libvibrant6t64
ncbi-cn3d: 3-dimensional viewer for biological molecules

 Cn3D is a helper application for your web browser that allows you to
 view 3-dimensional structures from NCBI's Entrez retrieval service.

ncbi-cn3d-dbgsym: debug symbols for ncbi-cn3d
ncbi-data: Platform-independent data for the NCBI toolkit

 This package contains support files needed by the NCBI toolkit on all
 platforms.

ncbi-rrna-data: large rRNA BLAST databases distributed with the NCBI toolkit

 This package contains some ribosomal RNA BLAST databases distributed
 as part of the NCBI C Toolkit that are too large and specialized to
 include in ncbi-data. Specifically, it contains the databases
 Combined16SrRNA, LSURef_93.fasta, LSU_nomito_nochloro_noplastid,
 SSURef_93.fasta, and SSU_nomito_nochloro_noplastid, along with alias
 files to facilitate searching some of them in conjunction with
 databases included in ncbi-data.

ncbi-tools-bin: NCBI libraries for biology applications (text-based utilities)

 This package includes various utilities distributed with the NCBI C SDK,
 including the development tools asntool and errhdr (formerly of
 libncbi6-dev). None of the programs in this package require X; you can
 find the X-based utilities in the ncbi-tools-x11 package. BLAST and
 related tools now come from a separate source base, corresponding to the
 ncbi-blast+ and ncbi-blast+-legacy packages.

ncbi-tools-bin-dbgsym: debug symbols for ncbi-tools-bin
ncbi-tools-x11: NCBI libraries for biology applications (X-based utilities)

 This package includes some X-based utilities distributed with the
 NCBI C SDK: Network Entrez, Sequin, ddv, and udv. These programs
 are not part of ncbi-tools-bin because they depend on several
 additional library packages.

ncbi-tools-x11-dbgsym: debug symbols for ncbi-tools-x11